RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
SEMA6A-201ENST00000257414 MAP4K4O95819 1239 aaPredicted RBP12.19□□□□□ -0.46
SEMA6A-201ENST00000257414 HSP90AB4PQ58FF6 505 aa12.19□□□□□ -0.46
SEMA6A-201ENST00000257414 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 PLEKHF1Q96S99 279 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 HTATSF1O43719 755 aaKnown RBP12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 MX1P20591 662 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 KRT24Q2M2I5 525 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 AEBP1Q8IUX7 1158 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 PLEKHM2Q8IWE5 1019 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 PTPRCP08575 1304 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
SEMA6A-201ENST00000257414 TSHZ3Q63HK5 1081 aa12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 FIBPO43427 364 aa12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 MPNDQ8N594 471 aa12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 SLC26A8Q96RN1 970 aa12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 C1orf141Q5JVX7 400 aa12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.17□□□□□ -0.46
SEMA6A-201ENST00000257414 CLASRPQ8N2M8 674 aaKnown RBP12.16□□□□□ -0.46
SEMA6A-201ENST00000257414 PHF23Q9BUL5 403 aaPredicted RBP12.16□□□□□ -0.46
SEMA6A-201ENST00000257414 RBM27Q9P2N5 1060 aaKnown RBP12.16□□□□□ -0.46
SEMA6A-201ENST00000257414 PPIP5K1Q6PFW1 1433 aa12.16□□□□□ -0.46
SEMA6A-201ENST00000257414 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
SEMA6A-201ENST00000257414 NUTM1Q86Y26 1132 aa12.15□□□□□ -0.46
SEMA6A-201ENST00000257414 ZSCAN23Q3MJ62 389 aa12.15□□□□□ -0.46
SEMA6A-201ENST00000257414 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 G3BP1Q13283 466 aaKnown RBP eCLIP12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 HSP90AB2PQ58FF8 381 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 CEP85Q6P2H3 762 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 ABCA6Q8N139 1617 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 CCDC9Q9Y3X0 531 aaKnown RBP12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 NCKAP5LQ9HCH0 1330 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 EFCAB6Q5THR3 1501 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 NRDCO43847 1150 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 IL13P35225 146 aa12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 EIF4A2Q14240 407 aaKnown RBP12.14□□□□□ -0.47
SEMA6A-201ENST00000257414 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 H3BQV1 296 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 IFFO2Q5TF58 517 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 LRRFIP2Q9Y608 721 aaKnown RBP12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 PDE1AP54750 535 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 FLIIQ13045 1269 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 POGZQ7Z3K3 1410 aa12.13□□□□□ -0.47
SEMA6A-201ENST00000257414 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 TMX3Q96JJ7 454 aa12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 RNF17Q9BXT8 1623 aaKnown RBP12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 NEXNQ0ZGT2 675 aa12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 FAM184AQ8NB25 1140 aa12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 CWC27Q6UX04 472 aaKnown RBP12.12□□□□□ -0.47
SEMA6A-201ENST00000257414 FSD2A1L4K1 749 aa12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 ACEP12821 1306 aa12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 DDX58O95786 925 aaKnown RBP12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 UQCRHLA0A096LP55 91 aa12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 LETM1O95202 739 aaPredicted RBP12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 UQCRHP07919 91 aa12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 PSME1Q06323 249 aa12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 ABCC4O15439 1325 aa12.11□□□□□ -0.47
SEMA6A-201ENST00000257414 MAP7D2Q96T17 732 aa12.1□□□□□ -0.47
SEMA6A-201ENST00000257414 TTC21BQ7Z4L5 1316 aa12.1□□□□□ -0.47
SEMA6A-201ENST00000257414 CEP152O94986 1710 aa12.1□□□□□ -0.47
SEMA6A-201ENST00000257414 A0A0G2JS52 829 aa12.1□□□□□ -0.47
SEMA6A-201ENST00000257414 MSH6P52701 1360 aa12.1□□□□□ -0.47
SEMA6A-201ENST00000257414 FSD1Q9BTV5 496 aa12.1□□□□□ -0.47
SEMA6A-201ENST00000257414 CYP46A1Q9Y6A2 500 aa12.1□□□□□ -0.47
SEMA6A-201ENST00000257414 GOLGA6L19H0YKK7 550 aa12.09□□□□□ -0.47
SEMA6A-201ENST00000257414 GSPT1P15170 499 aaKnown RBP12.09□□□□□ -0.47
SEMA6A-201ENST00000257414 ESYT1Q9BSJ8 1104 aa12.09□□□□□ -0.47
SEMA6A-201ENST00000257414 CD2BP2O95400 341 aaKnown RBP12.09□□□□□ -0.47
SEMA6A-201ENST00000257414 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
SEMA6A-201ENST00000257414 KIF3AQ9Y496 699 aa12.09□□□□□ -0.47
SEMA6A-201ENST00000257414 KIF1BPQ96EK5 621 aa12.09□□□□□ -0.47
SEMA6A-201ENST00000257414 JAKMIP1Q96N16 626 aaKnown RBP12.09□□□□□ -0.47
SEMA6A-201ENST00000257414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.08□□□□□ -0.47
SEMA6A-201ENST00000257414 GORABQ5T7V8 394 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 ARAP3Q8WWN8 1544 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 FOXO3O43524 673 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 PSMA5P28066 241 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 LRSAM1Q6UWE0 723 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 GAS2L3Q86XJ1 694 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 EDC4Q6P2E9 1401 aaKnown RBP12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 BECN2A8MW95 431 aa12.08□□□□□ -0.48
SEMA6A-201ENST00000257414 TAF7Q15545 349 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms