RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 RARSP54136 660 aaKnown RBP14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 LRP6O75581 1613 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 FCHSD2O94868 740 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 CSB-PGBD3P0DP91 1061 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 FBXO41Q8TF61 875 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 RSPH6AQ9H0K4 717 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 STRN4Q9NRL3 753 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 BTG4Q9NY30 223 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 SPATA31A6Q5VVP1 1343 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 IGSF1Q8N6C5 1336 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 ABCC6O95255 1503 aa14.66□□□□□ -0.06
CLUHP3-201ENST00000254109 COL14A1Q05707 1796 aaKnown RBP14.65□□□□□ -0.06
CLUHP3-201ENST00000254109 CT47B1P0C2W7 299 aaPredicted RBP14.65□□□□□ -0.06
CLUHP3-201ENST00000254109 PRKAR2BP31323 418 aa14.65□□□□□ -0.06
CLUHP3-201ENST00000254109 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
CLUHP3-201ENST00000254109 COL5A2P05997 1499 aaPredicted RBP14.64□□□□□ -0.07
CLUHP3-201ENST00000254109 NLRP2Q9NX02 1062 aa14.64□□□□□ -0.07
CLUHP3-201ENST00000254109 IL16Q14005 1332 aa14.64□□□□□ -0.07
CLUHP3-201ENST00000254109 PDE4AP27815 886 aa14.64□□□□□ -0.07
CLUHP3-201ENST00000254109 RIPK4P57078 832 aa14.64□□□□□ -0.07
CLUHP3-201ENST00000254109 EVA1CP58658 441 aa14.64□□□□□ -0.07
CLUHP3-201ENST00000254109 PLCH1Q4KWH8 1693 aa14.63□□□□□ -0.07
CLUHP3-201ENST00000254109 AAMPQ13685 434 aa14.63□□□□□ -0.07
CLUHP3-201ENST00000254109 LARP1Q6PKG0 1096 aaKnown RBP14.63□□□□□ -0.07
CLUHP3-201ENST00000254109 PHACTR3Q96KR7 559 aa14.63□□□□□ -0.07
CLUHP3-201ENST00000254109 C8orf37Q96NL8 207 aa14.63□□□□□ -0.07
CLUHP3-201ENST00000254109 TRIM35Q9UPQ4 493 aa14.63□□□□□ -0.07
CLUHP3-201ENST00000254109 BACH2Q9BYV9 841 aa14.62□□□□□ -0.07
CLUHP3-201ENST00000254109 WDR17Q8IZU2 1322 aa14.62□□□□□ -0.07
CLUHP3-201ENST00000254109 TOM1L2Q6ZVM7 507 aa14.61□□□□□ -0.07
CLUHP3-201ENST00000254109 PANK1Q8TE04 598 aa14.61□□□□□ -0.07
CLUHP3-201ENST00000254109 NGLY1Q96IV0 654 aa14.61□□□□□ -0.07
CLUHP3-201ENST00000254109 COG6Q9Y2V7 657 aa14.61□□□□□ -0.07
CLUHP3-201ENST00000254109 KDRP35968 1356 aa14.6□□□□□ -0.07
CLUHP3-201ENST00000254109 MEX3CQ5U5Q3 659 aaKnown RBP14.6□□□□□ -0.07
CLUHP3-201ENST00000254109 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
CLUHP3-201ENST00000254109 FAM208AQ9UK61 1670 aaKnown RBP14.6□□□□□ -0.07
CLUHP3-201ENST00000254109 TSR2Q969E8 191 aaKnown RBP14.59□□□□□ -0.07
CLUHP3-201ENST00000254109 NCAPD2Q15021 1401 aa14.59□□□□□ -0.07
CLUHP3-201ENST00000254109 USP35Q9P2H5 1018 aa14.59□□□□□ -0.07
CLUHP3-201ENST00000254109 SLIT2O94813 1529 aa14.59□□□□□ -0.07
CLUHP3-201ENST00000254109 NRAPQ86VF7 1730 aa14.58□□□□□ -0.08
CLUHP3-201ENST00000254109 CALD1Q05682 793 aaKnown RBP14.58□□□□□ -0.08
CLUHP3-201ENST00000254109 EXOSC9Q06265 439 aaKnown RBP14.58□□□□□ -0.08
CLUHP3-201ENST00000254109 IPO9Q96P70 1041 aaKnown RBP14.58□□□□□ -0.08
CLUHP3-201ENST00000254109 BCL2L13Q9BXK5 485 aa14.58□□□□□ -0.08
CLUHP3-201ENST00000254109 ZKSCAN2Q63HK3 967 aa14.57□□□□□ -0.08
CLUHP3-201ENST00000254109 NWD2Q9ULI1 1742 aa14.57□□□□□ -0.08
CLUHP3-201ENST00000254109 NFE2L2Q16236 605 aa14.57□□□□□ -0.08
CLUHP3-201ENST00000254109 CARD10Q9BWT7 1032 aa14.57□□□□□ -0.08
CLUHP3-201ENST00000254109 NOP58Q9Y2X3 529 aaKnown RBP14.57□□□□□ -0.08
CLUHP3-201ENST00000254109 CRB1P82279 1406 aa14.56□□□□□ -0.08
CLUHP3-201ENST00000254109 MTHFSDQ2M296 383 aaKnown RBP14.56□□□□□ -0.08
CLUHP3-201ENST00000254109 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
CLUHP3-201ENST00000254109 BCL9LQ86UU0 1499 aa14.55□□□□□ -0.08
CLUHP3-201ENST00000254109 DLG5Q8TDM6 1919 aa14.55□□□□□ -0.08
CLUHP3-201ENST00000254109 SKAP1Q86WV1 359 aa14.55□□□□□ -0.08
CLUHP3-201ENST00000254109 UNC5CLQ8IV45 518 aa14.55□□□□□ -0.08
CLUHP3-201ENST00000254109 FTSJ3Q8IY81 847 aaKnown RBP14.55□□□□□ -0.08
CLUHP3-201ENST00000254109 FNBP4Q8N3X1 1017 aaPredicted RBP14.55□□□□□ -0.08
CLUHP3-201ENST00000254109 MEGF6O75095 1541 aa14.54□□□□□ -0.08
CLUHP3-201ENST00000254109 IGHDP01880 384 aa14.54□□□□□ -0.08
CLUHP3-201ENST00000254109 LMOD3Q0VAK6 560 aa14.54□□□□□ -0.08
CLUHP3-201ENST00000254109 DZIP1LQ8IYY4 767 aaKnown RBP14.54□□□□□ -0.08
CLUHP3-201ENST00000254109 RAPGEF4Q8WZA2 1011 aa14.54□□□□□ -0.08
CLUHP3-201ENST00000254109 USP21Q9UK80 565 aa14.54□□□□□ -0.08
CLUHP3-201ENST00000254109 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
CLUHP3-201ENST00000254109 AFF2P51816 1311 aa14.53□□□□□ -0.08
CLUHP3-201ENST00000254109 RLBP1P12271 317 aa14.53□□□□□ -0.08
CLUHP3-201ENST00000254109 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
CLUHP3-201ENST00000254109 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
CLUHP3-201ENST00000254109 TATP17735 454 aaPredicted RBP14.52□□□□□ -0.08
CLUHP3-201ENST00000254109 MVPQ14764 893 aaKnown RBP14.52□□□□□ -0.08
CLUHP3-201ENST00000254109 FAM161AQ3B820 660 aa14.52□□□□□ -0.08
CLUHP3-201ENST00000254109 SPATA31A1Q5TZJ5 1347 aa14.52□□□□□ -0.08
CLUHP3-201ENST00000254109 IPO8O15397 1037 aaKnown RBP14.52□□□□□ -0.09
CLUHP3-201ENST00000254109 RGS3P49796 1198 aa14.52□□□□□ -0.09
CLUHP3-201ENST00000254109 SSH1Q8WYL5 1049 aa14.52□□□□□ -0.09
CLUHP3-201ENST00000254109 ZNF428Q96B54 188 aa14.52□□□□□ -0.09
CLUHP3-201ENST00000254109 LAS1LQ9Y4W2 734 aaKnown RBP14.52□□□□□ -0.09
CLUHP3-201ENST00000254109 SPATA31A5Q5VU36 1347 aa14.51□□□□□ -0.09
CLUHP3-201ENST00000254109 SPATA31A7Q8IWB4 1347 aa14.51□□□□□ -0.09
CLUHP3-201ENST00000254109 ILDR1Q86SU0 546 aaPredicted RBP14.51□□□□□ -0.09
CLUHP3-201ENST00000254109 RWDD1Q9H446 243 aaPredicted RBP14.51□□□□□ -0.09
CLUHP3-201ENST00000254109 IL2RBP14784 551 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 GNAI1P63096 354 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 ALDH1L2Q3SY69 923 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 GAS2L2Q8NHY3 880 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 THUMPD2Q9BTF0 503 aaKnown RBP14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 TNNQ9UQP3 1299 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 KIF16BQ96L93 1317 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 VPS72Q15906 364 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 ATF7IPQ6VMQ6 1270 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 IFT57Q9NWB7 429 aa14.5□□□□□ -0.09
CLUHP3-201ENST00000254109 AMOTQ4VCS5 1084 aa14.49□□□□□ -0.09
CLUHP3-201ENST00000254109 ZNF530Q6P9A1 599 aaPredicted RBP14.49□□□□□ -0.09
CLUHP3-201ENST00000254109 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.49□□□□□ -0.09
CLUHP3-201ENST00000254109 PARP4Q9UKK3 1724 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms