RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
SAFB2-201ENST00000252542 PLEKHG3A1L390 1219 aa18.66■□□□□ 0.58
SAFB2-201ENST00000252542 GNAT3A8MTJ3 354 aa18.66■□□□□ 0.58
SAFB2-201ENST00000252542 FOXD4L6Q3SYB3 417 aaPredicted RBP18.66■□□□□ 0.58
SAFB2-201ENST00000252542 FOXD4L3Q6VB84 417 aaPredicted RBP18.66■□□□□ 0.58
SAFB2-201ENST00000252542 GAS2L2Q8NHY3 880 aa18.66■□□□□ 0.58
SAFB2-201ENST00000252542 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
SAFB2-201ENST00000252542 LGR6Q9HBX8 967 aa18.65■□□□□ 0.58
SAFB2-201ENST00000252542 ZNF330Q9Y3S2 320 aaPredicted RBP18.65■□□□□ 0.58
SAFB2-201ENST00000252542 HOXC9P31274 260 aa18.65■□□□□ 0.58
SAFB2-201ENST00000252542 ZNF530Q6P9A1 599 aaPredicted RBP18.65■□□□□ 0.58
SAFB2-201ENST00000252542 FAM135BQ49AJ0 1406 aa18.65■□□□□ 0.58
SAFB2-201ENST00000252542 PIP4K2AP48426 406 aaPredicted RBP18.65■□□□□ 0.58
SAFB2-201ENST00000252542 MYO3AQ8NEV4 1616 aa18.64■□□□□ 0.58
SAFB2-201ENST00000252542 AAMPQ13685 434 aa18.64■□□□□ 0.58
SAFB2-201ENST00000252542 PHAXQ9H814 394 aaKnown RBP18.64■□□□□ 0.58
SAFB2-201ENST00000252542 NLRP1Q9C000 1473 aa18.64■□□□□ 0.57
SAFB2-201ENST00000252542 NCLP19338 710 aaKnown RBP18.64■□□□□ 0.57
SAFB2-201ENST00000252542 KCNQ3O43525 872 aa18.64■□□□□ 0.57
SAFB2-201ENST00000252542 TBC1D9Q6ZT07 1266 aa18.64■□□□□ 0.57
SAFB2-201ENST00000252542 CHL1O00533 1208 aa18.63■□□□□ 0.57
SAFB2-201ENST00000252542 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
SAFB2-201ENST00000252542 HSPA2P54652 639 aa18.63■□□□□ 0.57
SAFB2-201ENST00000252542 CPSF1Q10570 1443 aaKnown RBP18.62■□□□□ 0.57
SAFB2-201ENST00000252542 CHRNA2Q15822 529 aa18.62■□□□□ 0.57
SAFB2-201ENST00000252542 NEURL4Q96JN8 1562 aa18.62■□□□□ 0.57
SAFB2-201ENST00000252542 GCC1Q96CN9 775 aa18.62■□□□□ 0.57
SAFB2-201ENST00000252542 PTPRUQ92729 1446 aa18.62■□□□□ 0.57
SAFB2-201ENST00000252542 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
SAFB2-201ENST00000252542 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
SAFB2-201ENST00000252542 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
SAFB2-201ENST00000252542 FLIIQ13045 1269 aa18.61■□□□□ 0.57
SAFB2-201ENST00000252542 ADAMTS13Q76LX8 1427 aa18.61■□□□□ 0.57
SAFB2-201ENST00000252542 ATP7BP35670 1465 aa18.61■□□□□ 0.57
SAFB2-201ENST00000252542 IL17REQ8NFR9 667 aa18.61■□□□□ 0.57
SAFB2-201ENST00000252542 JARID2Q92833 1246 aaPredicted RBP18.61■□□□□ 0.57
SAFB2-201ENST00000252542 C1orf141Q5JVX7 400 aa18.6■□□□□ 0.57
SAFB2-201ENST00000252542 USP6P35125 1406 aa18.6■□□□□ 0.57
SAFB2-201ENST00000252542 DTNBO60941 627 aa18.6■□□□□ 0.57
SAFB2-201ENST00000252542 MSH6P52701 1360 aa18.6■□□□□ 0.57
SAFB2-201ENST00000252542 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
SAFB2-201ENST00000252542 LRRFIP2Q9Y608 721 aaKnown RBP18.59■□□□□ 0.57
SAFB2-201ENST00000252542 NAP1L5Q96NT1 182 aaPredicted RBP18.59■□□□□ 0.57
SAFB2-201ENST00000252542 HMMRO75330 724 aa18.59■□□□□ 0.57
SAFB2-201ENST00000252542 CCDC30Q5VVM6 783 aa18.59■□□□□ 0.57
SAFB2-201ENST00000252542 NUTM1Q86Y26 1132 aa18.59■□□□□ 0.57
SAFB2-201ENST00000252542 FLT4P35916 1363 aa18.58■□□□□ 0.57
SAFB2-201ENST00000252542 MYL6BP14649 208 aa18.58■□□□□ 0.56
SAFB2-201ENST00000252542 SLC39A6Q13433 755 aa18.58■□□□□ 0.56
SAFB2-201ENST00000252542 SURF6O75683 361 aaKnown RBP18.58■□□□□ 0.56
SAFB2-201ENST00000252542 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.56
SAFB2-201ENST00000252542 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
SAFB2-201ENST00000252542 PLEKHG1Q9ULL1 1385 aa18.57■□□□□ 0.56
SAFB2-201ENST00000252542 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
SAFB2-201ENST00000252542 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
SAFB2-201ENST00000252542 UBTFL1P0CB47 393 aaPredicted RBP18.56■□□□□ 0.56
SAFB2-201ENST00000252542 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
SAFB2-201ENST00000252542 CDC45O75419 566 aa18.56■□□□□ 0.56
SAFB2-201ENST00000252542 GNAI2P04899 355 aa18.56■□□□□ 0.56
SAFB2-201ENST00000252542 ARHGAP45Q92619 1136 aa18.56■□□□□ 0.56
SAFB2-201ENST00000252542 CHPF2Q9P2E5 772 aa18.55■□□□□ 0.56
SAFB2-201ENST00000252542 ANO2Q9NQ90 1003 aa18.55■□□□□ 0.56
SAFB2-201ENST00000252542 PLEKHM2Q8IWE5 1019 aa18.55■□□□□ 0.56
SAFB2-201ENST00000252542 FAM43AQ8N2R8 423 aa18.55■□□□□ 0.56
SAFB2-201ENST00000252542 AATKQ6ZMQ8 1374 aa18.54■□□□□ 0.56
SAFB2-201ENST00000252542 PNMA6EA0A0J9YXQ4 647 aa18.54■□□□□ 0.56
SAFB2-201ENST00000252542 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
SAFB2-201ENST00000252542 PI4KAP2A4QPH2 592 aa18.54■□□□□ 0.56
SAFB2-201ENST00000252542 PI4KAP1Q8N8J0 262 aa18.54■□□□□ 0.56
SAFB2-201ENST00000252542 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
SAFB2-201ENST00000252542 CD2BP2O95400 341 aaKnown RBP18.54■□□□□ 0.56
SAFB2-201ENST00000252542 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
SAFB2-201ENST00000252542 C9orf78Q9NZ63 289 aaPredicted RBP18.54■□□□□ 0.56
SAFB2-201ENST00000252542 GCP02774 474 aa18.53■□□□□ 0.56
SAFB2-201ENST00000252542 LARP6Q9BRS8 491 aaKnown RBP18.53■□□□□ 0.56
SAFB2-201ENST00000252542 ABCC4O15439 1325 aa18.53■□□□□ 0.56
SAFB2-201ENST00000252542 ATF3P18847 181 aa18.53■□□□□ 0.56
SAFB2-201ENST00000252542 SDSP20132 328 aa18.53■□□□□ 0.56
SAFB2-201ENST00000252542 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
SAFB2-201ENST00000252542 SIRT1Q96EB6 747 aa18.53■□□□□ 0.56
SAFB2-201ENST00000252542 BMP2KLQ5H9B9 411 aa18.52■□□□□ 0.56
SAFB2-201ENST00000252542 SIL1Q9H173 461 aa18.52■□□□□ 0.56
SAFB2-201ENST00000252542 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.56
SAFB2-201ENST00000252542 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.56
SAFB2-201ENST00000252542 SPATA31D1Q6ZQQ2 1576 aa18.52■□□□□ 0.55
SAFB2-201ENST00000252542 SRGAP3O43295 1099 aa18.51■□□□□ 0.55
SAFB2-201ENST00000252542 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
SAFB2-201ENST00000252542 L1TD1Q5T7N2 865 aaKnown RBP18.51■□□□□ 0.55
SAFB2-201ENST00000252542 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
SAFB2-201ENST00000252542 DCTPP1Q9H773 170 aa18.5■□□□□ 0.55
SAFB2-201ENST00000252542 CHMP3Q9Y3E7 222 aa18.5■□□□□ 0.55
SAFB2-201ENST00000252542 SBNO1A3KN83 1393 aa18.5■□□□□ 0.55
SAFB2-201ENST00000252542 RPAP2Q8IXW5 612 aaPredicted RBP18.5■□□□□ 0.55
SAFB2-201ENST00000252542 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
SAFB2-201ENST00000252542 AGLP35573 1532 aa18.5■□□□□ 0.55
SAFB2-201ENST00000252542 GOLGA6L3A6NEY3 463 aa18.5■□□□□ 0.55
SAFB2-201ENST00000252542 CDK12Q9NYV4 1490 aaPredicted RBP18.5■□□□□ 0.55
SAFB2-201ENST00000252542 CHMP5Q9NZZ3 219 aa18.5■□□□□ 0.55
SAFB2-201ENST00000252542 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
SAFB2-201ENST00000252542 RRAGDQ9NQL2 400 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms