RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 RFX1P22670 979 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 GPTP24298 496 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 MPNDQ8N594 471 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 BECN2A8MW95 431 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 YY1P25490 414 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 AMOTL1Q8IY63 956 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 ABT1Q9ULW3 272 aaKnown RBP5.67□□□□□ -1.5
RAP1B-201ENST00000250559 GNAT3A8MTJ3 354 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 RARSP54136 660 aaKnown RBP5.67□□□□□ -1.5
RAP1B-201ENST00000250559 HDGFL1Q5TGJ6 251 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 IL27Q8NEV9 243 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 JARID2Q92833 1246 aaPredicted RBP5.67□□□□□ -1.5
RAP1B-201ENST00000250559 EXOC6BQ9Y2D4 811 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 SRGAP3O43295 1099 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 CCAR2Q8N163 923 aaKnown RBP5.67□□□□□ -1.5
RAP1B-201ENST00000250559 NUP153P49790 1475 aaKnown RBP5.67□□□□□ -1.5
RAP1B-201ENST00000250559 SASS6Q6UVJ0 657 aa5.67□□□□□ -1.5
RAP1B-201ENST00000250559 SKIV2LQ15477 1246 aaKnown RBP5.67□□□□□ -1.5
RAP1B-201ENST00000250559 CPLX1O14810 134 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 ZNF530Q6P9A1 599 aaPredicted RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 SRCIN1Q9C0H9 1055 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 AKAP17AQ02040 695 aaKnown RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 EN1Q05925 392 aaPredicted RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 IDI1Q13907 227 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 GPATCH8Q9UKJ3 1502 aaKnown RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 FKBP4Q02790 459 aaKnown RBP eCLIP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 TMEM132AQ24JP5 1023 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 CAVIN1Q6NZI2 390 aaKnown RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 SPC24Q8NBT2 197 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 PCMTD1Q96MG8 357 aaPredicted RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 FMNL2Q96PY5 1086 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 PSMA5P28066 241 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 TMPOP42166 694 aaKnown RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 GCC1Q96CN9 775 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 NINLQ9Y2I6 1382 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 PLEKHO1Q53GL0 409 aaPredicted RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 TRDNQ13061 729 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 RFC4P35249 363 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 NKTRP30414 1462 aaKnown RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 HSP90AB4PQ58FF6 505 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 FAM83GA6ND36 823 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 RNF20Q5VTR2 975 aa5.66□□□□□ -1.5
RAP1B-201ENST00000250559 ZNF335Q9H4Z2 1342 aaPredicted RBP5.66□□□□□ -1.5
RAP1B-201ENST00000250559 BTG4Q9NY30 223 aa5.65□□□□□ -1.5
RAP1B-201ENST00000250559 GAS2L2Q8NHY3 880 aa5.65□□□□□ -1.5
RAP1B-201ENST00000250559 SSH1Q8WYL5 1049 aa5.65□□□□□ -1.5
RAP1B-201ENST00000250559 NFE2L2Q16236 605 aa5.65□□□□□ -1.5
RAP1B-201ENST00000250559 HDAC9Q9UKV0 1011 aa5.65□□□□□ -1.5
RAP1B-201ENST00000250559 ACEP12821 1306 aa5.65□□□□□ -1.5
RAP1B-201ENST00000250559 MAP3K1Q13233 1512 aa5.65□□□□□ -1.5
RAP1B-201ENST00000250559 WDR62O43379 1518 aa5.65□□□□□ -1.51
RAP1B-201ENST00000250559 CLASRPQ8N2M8 674 aaKnown RBP5.65□□□□□ -1.51
RAP1B-201ENST00000250559 CCDC85CA6NKD9 419 aa5.65□□□□□ -1.51
RAP1B-201ENST00000250559 ATP2B1P20020 1258 aa5.65□□□□□ -1.51
RAP1B-201ENST00000250559 TSHZ3Q63HK5 1081 aa5.65□□□□□ -1.51
RAP1B-201ENST00000250559 SLC52A1Q9NWF4 448 aa5.65□□□□□ -1.51
RAP1B-201ENST00000250559 BRPF3Q9ULD4 1205 aa5.65□□□□□ -1.51
RAP1B-201ENST00000250559 KIAA0556O60303 1618 aa5.65□□□□□ -1.51
RAP1B-201ENST00000250559 PDE3AQ14432 1141 aa5.65□□□□□ -1.51
RAP1B-201ENST00000250559 LRRFIP1Q32MZ4 808 aaKnown RBP5.65□□□□□ -1.51
RAP1B-201ENST00000250559 SPG7Q9UQ90 795 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 SCAF11Q99590 1463 aaKnown RBP5.64□□□□□ -1.51
RAP1B-201ENST00000250559 EIF4G3O43432 1585 aaKnown RBP5.64□□□□□ -1.51
RAP1B-201ENST00000250559 WDHD1O75717 1129 aaPredicted RBP5.64□□□□□ -1.51
RAP1B-201ENST00000250559 DEFB132Q7Z7B7 95 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 AACSQ86V21 672 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 ATAD2Q6PL18 1390 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 TRIM27P14373 513 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 PAF1Q8N7H5 531 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 PDILTQ8N807 584 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 WDR63Q8IWG1 891 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 PPM1EQ8WY54 764 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 CYP46A1Q9Y6A2 500 aa5.64□□□□□ -1.51
RAP1B-201ENST00000250559 K7ELQ4 463 aaPredicted RBP5.64□□□□□ -1.51
RAP1B-201ENST00000250559 TRAPPC8Q9Y2L5 1435 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 ITSN2Q9NZM3 1697 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 RALYLQ86SE5 291 aaKnown RBP5.63□□□□□ -1.51
RAP1B-201ENST00000250559 DUOX2Q9NRD8 1548 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 A0A0U1RQG5 324 aaPredicted RBP5.63□□□□□ -1.51
RAP1B-201ENST00000250559 PPFIA3O75145 1194 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 PIBF1Q8WXW3 757 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 POGZQ7Z3K3 1410 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 DUSP27Q5VZP5 1158 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 R3HCC1Q9Y3T6 440 aaKnown RBP5.63□□□□□ -1.51
RAP1B-201ENST00000250559 BRPF1P55201 1214 aaPredicted RBP5.63□□□□□ -1.51
RAP1B-201ENST00000250559 IFT57Q9NWB7 429 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 JAG2Q9Y219 1238 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 FAM13BQ9NYF5 915 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 CCT4P50991 539 aaKnown RBP5.63□□□□□ -1.51
RAP1B-201ENST00000250559 MYD88Q99836 296 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 PARP3Q9Y6F1 533 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 ASXL2Q76L83 1435 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 DHX29Q7Z478 1369 aaKnown RBP5.63□□□□□ -1.51
RAP1B-201ENST00000250559 TTLL5Q6EMB2 1281 aa5.63□□□□□ -1.51
RAP1B-201ENST00000250559 ADAMTS12P58397 1594 aa5.62□□□□□ -1.51
RAP1B-201ENST00000250559 CCDC8Q9H0W5 538 aaPredicted RBP5.62□□□□□ -1.51
RAP1B-201ENST00000250559 HOMER1Q86YM7 354 aa5.62□□□□□ -1.51
RAP1B-201ENST00000250559 DENND4BO75064 1496 aaPredicted RBP5.62□□□□□ -1.51
RAP1B-201ENST00000250559 RBM10P98175 930 aaKnown RBP5.62□□□□□ -1.51
RAP1B-201ENST00000250559 TSR1Q2NL82 804 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms