RNA–Protein interactions for RNA: ENST00000250003.3

MYOD1-201, Transcript of myogenic differentiation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYOD1, Length 1,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1-201ENST00000250003 NBPF4Q96M43 638 aa21.86■■□□□ 1.09
MYOD1-201ENST00000250003 MAPK8IP3Q9UPT6 1336 aa21.86■■□□□ 1.09
MYOD1-201ENST00000250003 ZBED9Q6R2W3 1325 aa21.85■■□□□ 1.09
MYOD1-201ENST00000250003 CSB-PGBD3P0DP91 1061 aa21.85■■□□□ 1.09
MYOD1-201ENST00000250003 PNNQ9H307 717 aaKnown RBP21.85■■□□□ 1.09
MYOD1-201ENST00000250003 BARGINQ6ZT62 677 aa21.84■■□□□ 1.09
MYOD1-201ENST00000250003 TCP11L2Q8N4U5 519 aa21.84■■□□□ 1.09
MYOD1-201ENST00000250003 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.09
MYOD1-201ENST00000250003 NCAPD2Q15021 1401 aa21.83■■□□□ 1.08
MYOD1-201ENST00000250003 BRWD3Q6RI45 1802 aa21.83■■□□□ 1.08
MYOD1-201ENST00000250003 RRP7AQ9Y3A4 280 aaKnown RBP21.83■■□□□ 1.08
MYOD1-201ENST00000250003 PHACTR3Q96KR7 559 aa21.82■■□□□ 1.08
MYOD1-201ENST00000250003 NLRP2Q9NX02 1062 aa21.81■■□□□ 1.08
MYOD1-201ENST00000250003 THRAP3Q9Y2W1 955 aaKnown RBP21.81■■□□□ 1.08
MYOD1-201ENST00000250003 WDR17Q8IZU2 1322 aa21.81■■□□□ 1.08
MYOD1-201ENST00000250003 NEFMP07197 916 aa21.8■■□□□ 1.08
MYOD1-201ENST00000250003 NEUROD2Q15784 382 aa21.8■■□□□ 1.08
MYOD1-201ENST00000250003 FAM182BQ5T319 152 aa21.8■■□□□ 1.08
MYOD1-201ENST00000250003 TOM1L2Q6ZVM7 507 aa21.8■■□□□ 1.08
MYOD1-201ENST00000250003 CRB1P82279 1406 aa21.79■■□□□ 1.08
MYOD1-201ENST00000250003 DLG5Q8TDM6 1919 aa21.79■■□□□ 1.08
MYOD1-201ENST00000250003 THSD7AQ9UPZ6 1657 aa21.77■■□□□ 1.08
MYOD1-201ENST00000250003 TMPOP42166 694 aaKnown RBP21.77■■□□□ 1.08
MYOD1-201ENST00000250003 PDE3BQ13370 1112 aa21.75■■□□□ 1.07
MYOD1-201ENST00000250003 SF3B2Q13435 895 aaKnown RBP21.75■■□□□ 1.07
MYOD1-201ENST00000250003 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
MYOD1-201ENST00000250003 MEGF6O75095 1541 aa21.73■■□□□ 1.07
MYOD1-201ENST00000250003 RIPK4P57078 832 aa21.73■■□□□ 1.07
MYOD1-201ENST00000250003 CARD10Q9BWT7 1032 aa21.73■■□□□ 1.07
MYOD1-201ENST00000250003 ZNF521Q96K83 1311 aa21.72■■□□□ 1.07
MYOD1-201ENST00000250003 PARP4Q9UKK3 1724 aaKnown RBP21.71■■□□□ 1.07
MYOD1-201ENST00000250003 MTHFSDQ2M296 383 aaKnown RBP21.71■■□□□ 1.07
MYOD1-201ENST00000250003 FAM196AQ6ZSG2 479 aa21.71■■□□□ 1.07
MYOD1-201ENST00000250003 DEFB132Q7Z7B7 95 aa21.71■■□□□ 1.07
MYOD1-201ENST00000250003 NGEFQ8N5V2 710 aa21.71■■□□□ 1.07
MYOD1-201ENST00000250003 WWC1Q8IX03 1113 aa21.71■■□□□ 1.07
MYOD1-201ENST00000250003 RAPGEF4Q8WZA2 1011 aa21.7■■□□□ 1.06
MYOD1-201ENST00000250003 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
MYOD1-201ENST00000250003 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
MYOD1-201ENST00000250003 WNK3Q9BYP7 1800 aa21.69■■□□□ 1.06
MYOD1-201ENST00000250003 PKD1L3Q7Z443 1732 aa21.68■■□□□ 1.06
MYOD1-201ENST00000250003 GAS2L2Q8NHY3 880 aa21.68■■□□□ 1.06
MYOD1-201ENST00000250003 DDB1Q16531 1140 aa21.67■■□□□ 1.06
MYOD1-201ENST00000250003 NCBP3Q53F19 620 aaKnown RBP21.67■■□□□ 1.06
MYOD1-201ENST00000250003 CDCA7Q9BWT1 371 aaPredicted RBP21.67■■□□□ 1.06
MYOD1-201ENST00000250003 TATP17735 454 aaPredicted RBP21.66■■□□□ 1.06
MYOD1-201ENST00000250003 CDCA7LQ96GN5 454 aa21.66■■□□□ 1.06
MYOD1-201ENST00000250003 OVOS2A0A0G2JMS6 1433 aa21.65■■□□□ 1.06
MYOD1-201ENST00000250003 TRIM37O94972 964 aa21.65■■□□□ 1.06
MYOD1-201ENST00000250003 BAG6P46379 1132 aa21.65■■□□□ 1.06
MYOD1-201ENST00000250003 PLEKHO1Q53GL0 409 aaPredicted RBP21.64■■□□□ 1.06
MYOD1-201ENST00000250003 GOLGA2Q08379 1002 aa21.64■■□□□ 1.05
MYOD1-201ENST00000250003 LMOD3Q0VAK6 560 aa21.64■■□□□ 1.05
MYOD1-201ENST00000250003 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.05
MYOD1-201ENST00000250003 THUMPD2Q9BTF0 503 aaKnown RBP21.64■■□□□ 1.05
MYOD1-201ENST00000250003 MAP3K5Q99683 1374 aa21.63■■□□□ 1.05
MYOD1-201ENST00000250003 IL2RBP14784 551 aa21.63■■□□□ 1.05
MYOD1-201ENST00000250003 DCTN1Q14203 1278 aa21.63■■□□□ 1.05
MYOD1-201ENST00000250003 ZNF530Q6P9A1 599 aaPredicted RBP21.63■■□□□ 1.05
MYOD1-201ENST00000250003 VIRMAQ69YN4 1812 aaKnown RBP21.63■■□□□ 1.05
MYOD1-201ENST00000250003 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
MYOD1-201ENST00000250003 SPINK5Q9NQ38 1064 aaPredicted RBP21.62■■□□□ 1.05
MYOD1-201ENST00000250003 PLEKHG2Q9H7P9 1386 aa21.62■■□□□ 1.05
MYOD1-201ENST00000250003 EXOC5O00471 708 aa21.62■■□□□ 1.05
MYOD1-201ENST00000250003 EN1Q05925 392 aaPredicted RBP21.62■■□□□ 1.05
MYOD1-201ENST00000250003 DISP2A7MBM2 1401 aa21.61■■□□□ 1.05
MYOD1-201ENST00000250003 MCM10Q7L590 875 aa21.61■■□□□ 1.05
MYOD1-201ENST00000250003 WDR63Q8IWG1 891 aa21.61■■□□□ 1.05
MYOD1-201ENST00000250003 LRRC37A3O60309 1634 aa21.6■■□□□ 1.05
MYOD1-201ENST00000250003 GNAT3A8MTJ3 354 aa21.6■■□□□ 1.05
MYOD1-201ENST00000250003 MARCH10Q8NA82 808 aaPredicted RBP21.59■■□□□ 1.05
MYOD1-201ENST00000250003 RTF1Q92541 710 aaKnown RBP21.59■■□□□ 1.05
MYOD1-201ENST00000250003 SPG7Q9UQ90 795 aa21.59■■□□□ 1.05
MYOD1-201ENST00000250003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.59■■□□□ 1.05
MYOD1-201ENST00000250003 APBA3O96018 575 aa21.58■■□□□ 1.05
MYOD1-201ENST00000250003 SLFN5Q08AF3 891 aa21.58■■□□□ 1.05
MYOD1-201ENST00000250003 AKAP4Q5JQC9 854 aa21.58■■□□□ 1.05
MYOD1-201ENST00000250003 C1orf141Q5JVX7 400 aa21.58■■□□□ 1.05
MYOD1-201ENST00000250003 SRCAPQ6ZRS2 3230 aa21.57■■□□□ 1.04
MYOD1-201ENST00000250003 E9PSI1 815 aa21.57■■□□□ 1.04
MYOD1-201ENST00000250003 ZCRB1Q8TBF4 217 aaKnown RBP21.56■■□□□ 1.04
MYOD1-201ENST00000250003 HTATSF1O43719 755 aaKnown RBP21.55■■□□□ 1.04
MYOD1-201ENST00000250003 IL16Q14005 1332 aa21.55■■□□□ 1.04
MYOD1-201ENST00000250003 PCDH11XQ9BZA7 1347 aa21.55■■□□□ 1.04
MYOD1-201ENST00000250003 PCDH11YQ9BZA8 1340 aa21.55■■□□□ 1.04
MYOD1-201ENST00000250003 CYP27B1O15528 508 aa21.55■■□□□ 1.04
MYOD1-201ENST00000250003 PHKG2P15735 406 aa21.55■■□□□ 1.04
MYOD1-201ENST00000250003 EZH2Q15910 746 aaKnown RBP21.55■■□□□ 1.04
MYOD1-201ENST00000250003 DUSP27Q5VZP5 1158 aa21.55■■□□□ 1.04
MYOD1-201ENST00000250003 CAMKK2Q96RR4 588 aa21.55■■□□□ 1.04
MYOD1-201ENST00000250003 ADAMTS7Q9UKP4 1686 aa21.54■■□□□ 1.04
MYOD1-201ENST00000250003 CALD1Q05682 793 aaKnown RBP21.54■■□□□ 1.04
MYOD1-201ENST00000250003 MPRIPQ6WCQ1 1025 aa21.54■■□□□ 1.04
MYOD1-201ENST00000250003 IL17REQ8NFR9 667 aa21.54■■□□□ 1.04
MYOD1-201ENST00000250003 LAS1LQ9Y4W2 734 aaKnown RBP21.54■■□□□ 1.04
MYOD1-201ENST00000250003 SCN11AQ9UI33 1791 aa21.54■■□□□ 1.04
MYOD1-201ENST00000250003 TRMT2AQ8IZ69 625 aaKnown RBP21.53■■□□□ 1.04
MYOD1-201ENST00000250003 TNS2Q63HR2 1409 aa21.53■■□□□ 1.04
MYOD1-201ENST00000250003 IFNL2Q8IZJ0 200 aa21.52■■□□□ 1.04
MYOD1-201ENST00000250003 KDM6AO15550 1401 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms