RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
MBD4-201ENST00000249910 KDRP35968 1356 aa18.68■□□□□ 0.58
MBD4-201ENST00000249910 SEC24BO95487 1268 aa18.68■□□□□ 0.58
MBD4-201ENST00000249910 ZBTB7BO15156 539 aaPredicted RBP18.67■□□□□ 0.58
MBD4-201ENST00000249910 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
MBD4-201ENST00000249910 TSPYL4Q9UJ04 414 aa18.66■□□□□ 0.58
MBD4-201ENST00000249910 SLC4A3P48751 1232 aa18.65■□□□□ 0.58
MBD4-201ENST00000249910 HDAC1Q13547 482 aaPredicted RBP18.65■□□□□ 0.58
MBD4-201ENST00000249910 ARHGAP45Q92619 1136 aa18.65■□□□□ 0.58
MBD4-201ENST00000249910 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
MBD4-201ENST00000249910 CRB1P82279 1406 aa18.64■□□□□ 0.58
MBD4-201ENST00000249910 NBPF6Q5VWK0 638 aa18.64■□□□□ 0.58
MBD4-201ENST00000249910 NBPF4Q96M43 638 aa18.64■□□□□ 0.58
MBD4-201ENST00000249910 HSPA2P54652 639 aa18.64■□□□□ 0.57
MBD4-201ENST00000249910 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
MBD4-201ENST00000249910 DDX17Q92841 729 aaKnown RBP18.64■□□□□ 0.57
MBD4-201ENST00000249910 LRRC59Q96AG4 307 aaKnown RBP18.63■□□□□ 0.57
MBD4-201ENST00000249910 IP6K1Q92551 441 aa18.62■□□□□ 0.57
MBD4-201ENST00000249910 ABCC4O15439 1325 aa18.62■□□□□ 0.57
MBD4-201ENST00000249910 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
MBD4-201ENST00000249910 GCP02774 474 aa18.62■□□□□ 0.57
MBD4-201ENST00000249910 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
MBD4-201ENST00000249910 NBR1Q14596 966 aa18.62■□□□□ 0.57
MBD4-201ENST00000249910 IL17REQ8NFR9 667 aa18.62■□□□□ 0.57
MBD4-201ENST00000249910 NECTIN2Q92692 538 aa18.61■□□□□ 0.57
MBD4-201ENST00000249910 SMC5Q8IY18 1101 aa18.61■□□□□ 0.57
MBD4-201ENST00000249910 LNPKQ9C0E8 428 aa18.6■□□□□ 0.57
MBD4-201ENST00000249910 SIRT2Q8IXJ6 389 aa18.6■□□□□ 0.57
MBD4-201ENST00000249910 API5Q9BZZ5 524 aaKnown RBP18.6■□□□□ 0.57
MBD4-201ENST00000249910 C19orf44Q9H6X5 657 aa18.6■□□□□ 0.57
MBD4-201ENST00000249910 MARF1Q9Y4F3 1742 aaKnown RBP18.59■□□□□ 0.57
MBD4-201ENST00000249910 G2E3Q7L622 706 aa18.59■□□□□ 0.57
MBD4-201ENST00000249910 KRT28Q7Z3Y7 464 aa18.59■□□□□ 0.57
MBD4-201ENST00000249910 KCNH5Q8NCM2 988 aa18.58■□□□□ 0.57
MBD4-201ENST00000249910 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.56
MBD4-201ENST00000249910 KIAA0232Q92628 1395 aa18.57■□□□□ 0.56
MBD4-201ENST00000249910 F6X3S4 739 aa18.57■□□□□ 0.56
MBD4-201ENST00000249910 AXIN2Q9Y2T1 843 aa18.57■□□□□ 0.56
MBD4-201ENST00000249910 NWD1Q149M9 1564 aa18.57■□□□□ 0.56
MBD4-201ENST00000249910 USP19O94966 1318 aa18.57■□□□□ 0.56
MBD4-201ENST00000249910 PKNOX2Q96KN3 472 aa18.56■□□□□ 0.56
MBD4-201ENST00000249910 ZC3H6P61129 1189 aaKnown RBP18.56■□□□□ 0.56
MBD4-201ENST00000249910 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
MBD4-201ENST00000249910 ANKRD45Q5TZF3 282 aa18.55■□□□□ 0.56
MBD4-201ENST00000249910 SLC4A10Q6U841 1118 aa18.55■□□□□ 0.56
MBD4-201ENST00000249910 ARHGEF25Q86VW2 580 aa18.55■□□□□ 0.56
MBD4-201ENST00000249910 TMEM94Q12767 1356 aa18.54■□□□□ 0.56
MBD4-201ENST00000249910 ATF3P18847 181 aa18.54■□□□□ 0.56
MBD4-201ENST00000249910 HAP1P54257 671 aaPredicted RBP18.54■□□□□ 0.56
MBD4-201ENST00000249910 NUCB1Q02818 461 aa18.54■□□□□ 0.56
MBD4-201ENST00000249910 MSH6P52701 1360 aa18.54■□□□□ 0.56
MBD4-201ENST00000249910 MAP3K5Q99683 1374 aa18.53■□□□□ 0.56
MBD4-201ENST00000249910 CHD1LQ86WJ1 897 aa18.53■□□□□ 0.56
MBD4-201ENST00000249910 NFAT5O94916 1531 aa18.53■□□□□ 0.56
MBD4-201ENST00000249910 INTS3Q68E01 1043 aaKnown RBP18.52■□□□□ 0.56
MBD4-201ENST00000249910 RTL1A6NKG5 1358 aa18.52■□□□□ 0.56
MBD4-201ENST00000249910 RGS12O14924 1447 aa18.52■□□□□ 0.56
MBD4-201ENST00000249910 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
MBD4-201ENST00000249910 HTATSF1O43719 755 aaKnown RBP18.52■□□□□ 0.56
MBD4-201ENST00000249910 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
MBD4-201ENST00000249910 DDRGK1Q96HY6 314 aa18.52■□□□□ 0.56
MBD4-201ENST00000249910 MEIS3Q99687 375 aa18.52■□□□□ 0.56
MBD4-201ENST00000249910 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
MBD4-201ENST00000249910 MPRIPQ6WCQ1 1025 aa18.51■□□□□ 0.55
MBD4-201ENST00000249910 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
MBD4-201ENST00000249910 CHMP4BQ9H444 224 aaKnown RBP18.51■□□□□ 0.55
MBD4-201ENST00000249910 LTN1O94822 1766 aa18.5■□□□□ 0.55
MBD4-201ENST00000249910 PTPRCP08575 1304 aa18.49■□□□□ 0.55
MBD4-201ENST00000249910 STK31Q9BXU1 1019 aa18.49■□□□□ 0.55
MBD4-201ENST00000249910 KCNQ3O43525 872 aa18.48■□□□□ 0.55
MBD4-201ENST00000249910 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
MBD4-201ENST00000249910 APBB1O00213 710 aa18.47■□□□□ 0.55
MBD4-201ENST00000249910 FKBP5Q13451 457 aaPredicted RBP18.47■□□□□ 0.55
MBD4-201ENST00000249910 GCC1Q96CN9 775 aa18.47■□□□□ 0.55
MBD4-201ENST00000249910 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
MBD4-201ENST00000249910 EIF2S2P20042 333 aaKnown RBP18.47■□□□□ 0.55
MBD4-201ENST00000249910 FLIIQ13045 1269 aa18.47■□□□□ 0.55
MBD4-201ENST00000249910 DEKP35659 375 aaKnown RBP18.46■□□□□ 0.55
MBD4-201ENST00000249910 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
MBD4-201ENST00000249910 CCDC30Q5VVM6 783 aa18.46■□□□□ 0.55
MBD4-201ENST00000249910 USP54Q70EL1 1684 aa18.45■□□□□ 0.54
MBD4-201ENST00000249910 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
MBD4-201ENST00000249910 PHAXQ9H814 394 aaKnown RBP18.44■□□□□ 0.54
MBD4-201ENST00000249910 UPF2Q9HAU5 1272 aaKnown RBP18.44■□□□□ 0.54
MBD4-201ENST00000249910 CHRNA2Q15822 529 aa18.44■□□□□ 0.54
MBD4-201ENST00000249910 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
MBD4-201ENST00000249910 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
MBD4-201ENST00000249910 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
MBD4-201ENST00000249910 MST1RQ04912 1400 aa18.43■□□□□ 0.54
MBD4-201ENST00000249910 TEFQ10587 303 aa18.43■□□□□ 0.54
MBD4-201ENST00000249910 PLEKHO1Q53GL0 409 aaPredicted RBP18.43■□□□□ 0.54
MBD4-201ENST00000249910 RGPD2P0DJD1 1756 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 ANXA1P04083 346 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 ANKRD44Q8N8A2 993 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 DCTPP1Q9H773 170 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 BTBD11A6QL63 1104 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 CADPS2Q86UW7 1296 aa18.42■□□□□ 0.54
MBD4-201ENST00000249910 NLRP2Q9NX02 1062 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms