RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 PLCH2O75038 1416 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 ABCC11Q96J66 1382 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 BTBD11A6QL63 1104 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 ZSCAN23Q3MJ62 389 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 TMX4Q9H1E5 349 aaPredicted RBP11.12□□□□□ -0.63
COL21A1-201ENST00000244728 SYCP2Q9BX26 1530 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 CPLX1O14810 134 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 SPC24Q8NBT2 197 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 IFT57Q9NWB7 429 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
COL21A1-201ENST00000244728 RAD21O60216 631 aa11.11□□□□□ -0.63
COL21A1-201ENST00000244728 ANXA1P04083 346 aa11.11□□□□□ -0.63
COL21A1-201ENST00000244728 CABP4P57796 275 aa11.11□□□□□ -0.63
COL21A1-201ENST00000244728 EIF2AK4Q9P2K8 1649 aaKnown RBP11.11□□□□□ -0.63
COL21A1-201ENST00000244728 ASXL2Q76L83 1435 aa11.11□□□□□ -0.63
COL21A1-201ENST00000244728 GOLGA6L19H0YKK7 550 aa11.11□□□□□ -0.63
COL21A1-201ENST00000244728 CLSTN1O94985 981 aa11.11□□□□□ -0.63
COL21A1-201ENST00000244728 TRMT2AQ8IZ69 625 aaKnown RBP11.11□□□□□ -0.63
COL21A1-201ENST00000244728 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
COL21A1-201ENST00000244728 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
COL21A1-201ENST00000244728 DISP1Q96F81 1524 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 GNAT3A8MTJ3 354 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 RNF20Q5VTR2 975 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
COL21A1-201ENST00000244728 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 PHF8Q9UPP1 1060 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 KIF3AQ9Y496 699 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 ADAMTS12P58397 1594 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 CCT4P50991 539 aaKnown RBP11.1□□□□□ -0.63
COL21A1-201ENST00000244728 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 ZBTB40Q9NUA8 1239 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 MAGI2Q86UL8 1455 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 USP19O94966 1318 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 ACEP12821 1306 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 SASS6Q6UVJ0 657 aa11.1□□□□□ -0.63
COL21A1-201ENST00000244728 BECN2A8MW95 431 aa11.09□□□□□ -0.63
COL21A1-201ENST00000244728 AEBP1Q8IUX7 1158 aa11.09□□□□□ -0.63
COL21A1-201ENST00000244728 RPAP2Q8IXW5 612 aaPredicted RBP11.09□□□□□ -0.63
COL21A1-201ENST00000244728 BICD2Q8TD16 824 aa11.09□□□□□ -0.63
COL21A1-201ENST00000244728 MTMR7Q9Y216 660 aa11.09□□□□□ -0.63
COL21A1-201ENST00000244728 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
COL21A1-201ENST00000244728 CNTROBQ8N137 903 aa11.09□□□□□ -0.63
COL21A1-201ENST00000244728 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
COL21A1-201ENST00000244728 STK11IPQ8N1F8 1099 aa11.09□□□□□ -0.63
COL21A1-201ENST00000244728 FSD2A1L4K1 749 aa11.08□□□□□ -0.64
COL21A1-201ENST00000244728 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
COL21A1-201ENST00000244728 RBM25P49756 843 aaKnown RBP11.08□□□□□ -0.64
COL21A1-201ENST00000244728 TRDNQ13061 729 aa11.08□□□□□ -0.64
COL21A1-201ENST00000244728 NPC1L1Q9UHC9 1359 aa11.08□□□□□ -0.64
COL21A1-201ENST00000244728 OFD1O75665 1012 aa11.08□□□□□ -0.64
COL21A1-201ENST00000244728 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
COL21A1-201ENST00000244728 TAF7Q15545 349 aaPredicted RBP11.08□□□□□ -0.64
COL21A1-201ENST00000244728 CWC27Q6UX04 472 aaKnown RBP11.07□□□□□ -0.64
COL21A1-201ENST00000244728 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 LETM1O95202 739 aaPredicted RBP11.07□□□□□ -0.64
COL21A1-201ENST00000244728 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
COL21A1-201ENST00000244728 TSHZ3Q63HK5 1081 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 GAS2L3Q86XJ1 694 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 USP25Q9UHP3 1055 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 STK3Q13188 491 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 KRT24Q2M2I5 525 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 CPLX2Q6PUV4 134 aaKnown RBP11.07□□□□□ -0.64
COL21A1-201ENST00000244728 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
COL21A1-201ENST00000244728 PES1O00541 588 aaKnown RBP11.06□□□□□ -0.64
COL21A1-201ENST00000244728 ATP2B1P20020 1258 aa11.06□□□□□ -0.64
COL21A1-201ENST00000244728 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
COL21A1-201ENST00000244728 TTC22Q5TAA0 569 aa11.06□□□□□ -0.64
COL21A1-201ENST00000244728 TRIM5Q9C035 493 aa11.06□□□□□ -0.64
COL21A1-201ENST00000244728 IL16Q14005 1332 aa11.06□□□□□ -0.64
COL21A1-201ENST00000244728 PIP4K2BP78356 416 aa11.06□□□□□ -0.64
COL21A1-201ENST00000244728 AACSQ86V21 672 aa11.06□□□□□ -0.64
COL21A1-201ENST00000244728 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
COL21A1-201ENST00000244728 CBX1P83916 185 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 CEBPZQ03701 1054 aaKnown RBP11.05□□□□□ -0.64
COL21A1-201ENST00000244728 LRRFIP1Q32MZ4 808 aaKnown RBP11.05□□□□□ -0.64
COL21A1-201ENST00000244728 LRSAM1Q6UWE0 723 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 RALYLQ86SE5 291 aaKnown RBP11.05□□□□□ -0.64
COL21A1-201ENST00000244728 C16orf71Q8IYS4 520 aaPredicted RBP11.05□□□□□ -0.64
COL21A1-201ENST00000244728 JARID2Q92833 1246 aaPredicted RBP11.05□□□□□ -0.64
COL21A1-201ENST00000244728 ZKSCAN5Q9Y2L8 839 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 VPS53Q5VIR6 699 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 ZGPATQ8N5A5 531 aaKnown RBP11.05□□□□□ -0.64
COL21A1-201ENST00000244728 PHACTR3Q96KR7 559 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 SPG7Q9UQ90 795 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 DYNC1I1O14576 645 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 MARCH6O60337 910 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 TPM3P06753 285 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 MCM5P33992 734 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 CHMP4CQ96CF2 233 aa11.05□□□□□ -0.64
COL21A1-201ENST00000244728 CFAP65Q6ZU64 1925 aaKnown RBP11.04□□□□□ -0.64
COL21A1-201ENST00000244728 SDSP20132 328 aa11.04□□□□□ -0.64
COL21A1-201ENST00000244728 POLKQ9UBT6 870 aa11.04□□□□□ -0.64
COL21A1-201ENST00000244728 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
COL21A1-201ENST00000244728 FKBP4Q02790 459 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL21A1-201ENST00000244728 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
COL21A1-201ENST00000244728 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
COL21A1-201ENST00000244728 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
COL21A1-201ENST00000244728 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms