RNA–Protein interactions for RNA: ENST00000244520.9

SNRPC-201, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPC, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-201ENST00000244520 NUP188Q5SRE5 1749 aa18.7■□□□□ 0.58
SNRPC-201ENST00000244520 EIF4A2Q14240 407 aaKnown RBP18.69■□□□□ 0.58
SNRPC-201ENST00000244520 EYA1Q99502 592 aa18.69■□□□□ 0.58
SNRPC-201ENST00000244520 RREB1Q92766 1687 aa18.69■□□□□ 0.58
SNRPC-201ENST00000244520 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
SNRPC-201ENST00000244520 PROM2Q8N271 834 aa18.68■□□□□ 0.58
SNRPC-201ENST00000244520 SHANK3Q9BYB0 1731 aa18.68■□□□□ 0.58
SNRPC-201ENST00000244520 NHSQ6T4R5 1651 aa18.66■□□□□ 0.58
SNRPC-201ENST00000244520 PRIM1P49642 420 aaKnown RBP18.66■□□□□ 0.58
SNRPC-201ENST00000244520 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
SNRPC-201ENST00000244520 KIF24Q5T7B8 1368 aa18.66■□□□□ 0.58
SNRPC-201ENST00000244520 BCL9O00512 1426 aa18.66■□□□□ 0.58
SNRPC-201ENST00000244520 PLSCR1O15162 318 aa18.65■□□□□ 0.58
SNRPC-201ENST00000244520 KCNQ4P56696 695 aa18.65■□□□□ 0.58
SNRPC-201ENST00000244520 NSD2O96028 1365 aa18.65■□□□□ 0.58
SNRPC-201ENST00000244520 PARD3Q8TEW0 1356 aa18.65■□□□□ 0.58
SNRPC-201ENST00000244520 DOT1LQ8TEK3 1739 aa18.64■□□□□ 0.57
SNRPC-201ENST00000244520 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
SNRPC-201ENST00000244520 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
SNRPC-201ENST00000244520 BTAF1O14981 1849 aa18.64■□□□□ 0.57
SNRPC-201ENST00000244520 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
SNRPC-201ENST00000244520 CYP27B1O15528 508 aa18.61■□□□□ 0.57
SNRPC-201ENST00000244520 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
SNRPC-201ENST00000244520 PDGFDQ9GZP0 370 aaPredicted RBP18.61■□□□□ 0.57
SNRPC-201ENST00000244520 PCDH11XQ9BZA7 1347 aa18.59■□□□□ 0.57
SNRPC-201ENST00000244520 PCDH11YQ9BZA8 1340 aa18.59■□□□□ 0.57
SNRPC-201ENST00000244520 MTHFSP49914 203 aa18.59■□□□□ 0.57
SNRPC-201ENST00000244520 MPRIPQ6WCQ1 1025 aa18.57■□□□□ 0.56
SNRPC-201ENST00000244520 LRRC4BQ9NT99 713 aa18.57■□□□□ 0.56
SNRPC-201ENST00000244520 RGPD3A6NKT7 1758 aaPredicted RBP18.57■□□□□ 0.56
SNRPC-201ENST00000244520 RGPD4Q7Z3J3 1758 aa18.57■□□□□ 0.56
SNRPC-201ENST00000244520 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
SNRPC-201ENST00000244520 STK32BQ9NY57 414 aa18.56■□□□□ 0.56
SNRPC-201ENST00000244520 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
SNRPC-201ENST00000244520 IGSF1Q8N6C5 1336 aa18.55■□□□□ 0.56
SNRPC-201ENST00000244520 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
SNRPC-201ENST00000244520 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
SNRPC-201ENST00000244520 TOGARAM1Q9Y4F4 1720 aa18.54■□□□□ 0.56
SNRPC-201ENST00000244520 IL13P35225 146 aa18.54■□□□□ 0.56
SNRPC-201ENST00000244520 ZNF827Q17R98 1081 aa18.54■□□□□ 0.56
SNRPC-201ENST00000244520 ZBTB7AO95365 584 aa18.53■□□□□ 0.56
SNRPC-201ENST00000244520 HMOX1P09601 288 aa18.53■□□□□ 0.56
SNRPC-201ENST00000244520 SLC15A2Q16348 729 aa18.52■□□□□ 0.56
SNRPC-201ENST00000244520 PHKG2P15735 406 aa18.51■□□□□ 0.55
SNRPC-201ENST00000244520 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
SNRPC-201ENST00000244520 LRP5O75197 1615 aa18.5■□□□□ 0.55
SNRPC-201ENST00000244520 ZNF530Q6P9A1 599 aaPredicted RBP18.5■□□□□ 0.55
SNRPC-201ENST00000244520 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
SNRPC-201ENST00000244520 PIGBQ92521 554 aa18.5■□□□□ 0.55
SNRPC-201ENST00000244520 CCNL1Q9UK58 526 aaPredicted RBP18.5■□□□□ 0.55
SNRPC-201ENST00000244520 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
SNRPC-201ENST00000244520 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
SNRPC-201ENST00000244520 ITGB4P16144 1822 aa18.48■□□□□ 0.55
SNRPC-201ENST00000244520 PAPPAQ13219 1627 aa18.48■□□□□ 0.55
SNRPC-201ENST00000244520 DIAPH1O60610 1272 aaKnown RBP18.47■□□□□ 0.55
SNRPC-201ENST00000244520 PALLDQ8WX93 1383 aa18.46■□□□□ 0.55
SNRPC-201ENST00000244520 CASZ1Q86V15 1759 aa18.46■□□□□ 0.55
SNRPC-201ENST00000244520 NKX1-1Q15270 411 aaPredicted RBP18.46■□□□□ 0.55
SNRPC-201ENST00000244520 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
SNRPC-201ENST00000244520 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
SNRPC-201ENST00000244520 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
SNRPC-201ENST00000244520 SPON1Q9HCB6 807 aa18.45■□□□□ 0.54
SNRPC-201ENST00000244520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNRPC-201ENST00000244520 TFCP2L1Q9NZI6 479 aa18.45■□□□□ 0.54
SNRPC-201ENST00000244520 PPP1R1BQ9UD71 204 aaPredicted RBP18.45■□□□□ 0.54
SNRPC-201ENST00000244520 ASAP1Q9ULH1 1129 aa18.45■□□□□ 0.54
SNRPC-201ENST00000244520 LY75O60449 1722 aa18.45■□□□□ 0.54
SNRPC-201ENST00000244520 NPC1L1Q9UHC9 1359 aa18.44■□□□□ 0.54
SNRPC-201ENST00000244520 AKT1S1Q96B36 256 aa18.44■□□□□ 0.54
SNRPC-201ENST00000244520 MSH5O43196 834 aa18.43■□□□□ 0.54
SNRPC-201ENST00000244520 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
SNRPC-201ENST00000244520 KDM6AO15550 1401 aaPredicted RBP18.42■□□□□ 0.54
SNRPC-201ENST00000244520 COL3A1P02461 1466 aaPredicted RBP18.42■□□□□ 0.54
SNRPC-201ENST00000244520 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
SNRPC-201ENST00000244520 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
SNRPC-201ENST00000244520 AMOTQ4VCS5 1084 aa18.41■□□□□ 0.54
SNRPC-201ENST00000244520 TUBGCP6Q96RT7 1819 aa18.41■□□□□ 0.54
SNRPC-201ENST00000244520 PNPLA7Q6ZV29 1317 aa18.41■□□□□ 0.54
SNRPC-201ENST00000244520 KDRP35968 1356 aa18.41■□□□□ 0.54
SNRPC-201ENST00000244520 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
SNRPC-201ENST00000244520 CABP4P57796 275 aa18.39■□□□□ 0.53
SNRPC-201ENST00000244520 MTHFSDQ2M296 383 aaKnown RBP18.39■□□□□ 0.53
SNRPC-201ENST00000244520 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
SNRPC-201ENST00000244520 PTGER2P43116 358 aa18.38■□□□□ 0.53
SNRPC-201ENST00000244520 SMARCC1Q92922 1105 aaPredicted RBP18.38■□□□□ 0.53
SNRPC-201ENST00000244520 DCAF5Q96JK2 942 aa18.38■□□□□ 0.53
SNRPC-201ENST00000244520 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
SNRPC-201ENST00000244520 C5P01031 1676 aa18.38■□□□□ 0.53
SNRPC-201ENST00000244520 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 PHF14O94880 888 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
SNRPC-201ENST00000244520 SIK1P57059 783 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 ITPK1Q13572 414 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 MSL1Q68DK7 614 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 AMIGO3Q86WK7 504 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 NFATC2IPQ8NCF5 419 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 CFAP53Q96M91 514 aa18.37■□□□□ 0.53
SNRPC-201ENST00000244520 ATP6V1AP38606 617 aa18.36■□□□□ 0.53
SNRPC-201ENST00000244520 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms