RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 MARF1Q9Y4F3 1742 aaKnown RBP12.04□□□□□ -0.48
EXOSC9-201ENST00000243498 SOX12O15370 315 aa12.04□□□□□ -0.48
EXOSC9-201ENST00000243498 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
EXOSC9-201ENST00000243498 LRRC59Q96AG4 307 aaKnown RBP12.04□□□□□ -0.48
EXOSC9-201ENST00000243498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.486e-7■■■□□ 18.4
EXOSC9-201ENST00000243498 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
EXOSC9-201ENST00000243498 RTL1A6NKG5 1358 aa12.04□□□□□ -0.48
EXOSC9-201ENST00000243498 MAP3K19Q56UN5 1328 aa12.04□□□□□ -0.48
EXOSC9-201ENST00000243498 ZBED9Q6R2W3 1325 aa12.04□□□□□ -0.48
EXOSC9-201ENST00000243498 SHPRHQ149N8 1683 aa12.03□□□□□ -0.48
EXOSC9-201ENST00000243498 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
EXOSC9-201ENST00000243498 SLIT3O75094 1523 aa12.03□□□□□ -0.48
EXOSC9-201ENST00000243498 GCP02774 474 aa12.03□□□□□ -0.48
EXOSC9-201ENST00000243498 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.03□□□□□ -0.48
EXOSC9-201ENST00000243498 ROBO1Q9Y6N7 1651 aa12.03□□□□□ -0.48
EXOSC9-201ENST00000243498 USP19O94966 1318 aa12.03□□□□□ -0.48
EXOSC9-201ENST00000243498 LTN1O94822 1766 aa12.03□□□□□ -0.48
EXOSC9-201ENST00000243498 FCHSD2O94868 740 aa12.02□□□□□ -0.48
EXOSC9-201ENST00000243498 RUNDC1Q96C34 613 aa12.02□□□□□ -0.48
EXOSC9-201ENST00000243498 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.48
EXOSC9-201ENST00000243498 FBLN1P23142 703 aa12.02□□□□□ -0.49
EXOSC9-201ENST00000243498 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
EXOSC9-201ENST00000243498 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
EXOSC9-201ENST00000243498 COL3A1P02461 1466 aaPredicted RBP12.02□□□□□ -0.49
EXOSC9-201ENST00000243498 AHDC1Q5TGY3 1603 aaPredicted RBP12.01□□□□□ -0.49
EXOSC9-201ENST00000243498 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
EXOSC9-201ENST00000243498 UBAP1LF5GYI3 381 aa12.01□□□□□ -0.49
EXOSC9-201ENST00000243498 IL13P35225 146 aa12.01□□□□□ -0.49
EXOSC9-201ENST00000243498 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
EXOSC9-201ENST00000243498 CERKQ8TCT0 537 aa12.01□□□□□ -0.49
EXOSC9-201ENST00000243498 IP6K1Q92551 441 aa12.01□□□□□ -0.49
EXOSC9-201ENST00000243498 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
EXOSC9-201ENST00000243498 PHRF1Q9P1Y6 1649 aaKnown RBP12□□□□□ -0.49
EXOSC9-201ENST00000243498 HOXC9P31274 260 aa12□□□□□ -0.49
EXOSC9-201ENST00000243498 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
EXOSC9-201ENST00000243498 MED1Q15648 1581 aaPredicted RBP11.99□□□□□ -0.49
EXOSC9-201ENST00000243498 NFAT5O94916 1531 aa11.99□□□□□ -0.49
EXOSC9-201ENST00000243498 HSP90AB2PQ58FF8 381 aa11.99□□□□□ -0.49
EXOSC9-201ENST00000243498 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
EXOSC9-201ENST00000243498 ARHGEF25Q86VW2 580 aa11.99□□□□□ -0.49
EXOSC9-201ENST00000243498 EIF4A2Q14240 407 aaKnown RBP11.98□□□□□ -0.49
EXOSC9-201ENST00000243498 ABCC6O95255 1503 aa11.98□□□□□ -0.49
EXOSC9-201ENST00000243498 PHLPP1O60346 1717 aa11.97□□□□□ -0.49
EXOSC9-201ENST00000243498 PEAK1Q9H792 1746 aa11.97□□□□□ -0.49
EXOSC9-201ENST00000243498 ZBTB7CA1YPR0 619 aa11.97□□□□□ -0.49
EXOSC9-201ENST00000243498 APAF1O14727 1248 aa11.96□□□□□ -0.49
EXOSC9-201ENST00000243498 PIP4K2BP78356 416 aa11.96□□□□□ -0.49
EXOSC9-201ENST00000243498 ILDR1Q86SU0 546 aaPredicted RBP11.96□□□□□ -0.49
EXOSC9-201ENST00000243498 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
EXOSC9-201ENST00000243498 CPDO75976 1380 aa11.96□□□□□ -0.5
EXOSC9-201ENST00000243498 ZC3H6P61129 1189 aaKnown RBP11.95□□□□□ -0.5
EXOSC9-201ENST00000243498 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
EXOSC9-201ENST00000243498 SNPHO15079 494 aa11.95□□□□□ -0.5
EXOSC9-201ENST00000243498 TCP11L2Q8N4U5 519 aa11.95□□□□□ -0.5
EXOSC9-201ENST00000243498 PRKAR2BP31323 418 aa11.94□□□□□ -0.5
EXOSC9-201ENST00000243498 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
EXOSC9-201ENST00000243498 CCDC27Q2M243 656 aa11.94□□□□□ -0.5
EXOSC9-201ENST00000243498 SULT6B1Q6IMI4 303 aa11.94□□□□□ -0.5
EXOSC9-201ENST00000243498 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
EXOSC9-201ENST00000243498 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
EXOSC9-201ENST00000243498 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
EXOSC9-201ENST00000243498 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 HMOX1P09601 288 aa11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 CABLES1Q8TDN4 633 aa11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 LTV1Q96GA3 475 aaPredicted RBP11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 EYA1Q99502 592 aa11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 PRDM11Q9NQV5 511 aa11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 RGPD1P0DJD0 1748 aa11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 IGSF1Q8N6C5 1336 aa11.93□□□□□ -0.5
EXOSC9-201ENST00000243498 FAM208AQ9UK61 1670 aaKnown RBP11.92□□□□□ -0.5
EXOSC9-201ENST00000243498 G3V3G9 751 aa11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 CSB-PGBD3P0DP91 1061 aa11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 TMPOP42166 694 aaKnown RBP11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 WDR63Q8IWG1 891 aa11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 ANKRD24Q8TF21 1146 aa11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 KIAA0232Q92628 1395 aa11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
EXOSC9-201ENST00000243498 ST18O60284 1047 aa11.9□□□□□ -0.5
EXOSC9-201ENST00000243498 KDRP35968 1356 aa11.9□□□□□ -0.5
EXOSC9-201ENST00000243498 RIPK4P57078 832 aa11.9□□□□□ -0.5
EXOSC9-201ENST00000243498 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
EXOSC9-201ENST00000243498 GAS2L2Q8NHY3 880 aa11.9□□□□□ -0.5
EXOSC9-201ENST00000243498 RGPD5Q99666 1765 aa11.9□□□□□ -0.5
EXOSC9-201ENST00000243498 COL18A1P39060 1754 aa11.9□□□□□ -0.5
EXOSC9-201ENST00000243498 ERBB3P21860 1342 aa11.89□□□□□ -0.51
EXOSC9-201ENST00000243498 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
EXOSC9-201ENST00000243498 E9PSI1 815 aa11.89□□□□□ -0.51
EXOSC9-201ENST00000243498 EVA1CP58658 441 aa11.89□□□□□ -0.51
EXOSC9-201ENST00000243498 WWC1Q8IX03 1113 aa11.89□□□□□ -0.51
EXOSC9-201ENST00000243498 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
EXOSC9-201ENST00000243498 JCADQ9P266 1359 aa11.88□□□□□ -0.51
EXOSC9-201ENST00000243498 AMOTQ4VCS5 1084 aa11.88□□□□□ -0.51
EXOSC9-201ENST00000243498 TMEM121BQ9BXQ6 578 aaPredicted RBP11.88□□□□□ -0.51
EXOSC9-201ENST00000243498 COL14A1Q05707 1796 aaKnown RBP11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 ZNF521Q96K83 1311 aa11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
EXOSC9-201ENST00000243498 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms