RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 MCM10Q7L590 875 aa13.2□□□□□ -0.3
COPA-201ENST00000241704 SSH1Q8WYL5 1049 aa13.2□□□□□ -0.3
COPA-201ENST00000241704 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
COPA-201ENST00000241704 HS1BP3Q53T59 392 aa13.2□□□□□ -0.3
COPA-201ENST00000241704 CLASRPQ8N2M8 674 aaKnown RBP13.2□□□□□ -0.3
COPA-201ENST00000241704 SRCIN1Q9C0H9 1055 aa13.2□□□□□ -0.3
COPA-201ENST00000241704 DCTN1Q14203 1278 aa13.19□□□□□ -0.3
COPA-201ENST00000241704 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
COPA-201ENST00000241704 COL17A1Q9UMD9 1497 aaPredicted RBP13.19□□□□□ -0.3
COPA-201ENST00000241704 BTBD11A6QL63 1104 aa13.19□□□□□ -0.3
COPA-201ENST00000241704 MYO5CQ9NQX4 1742 aa13.18□□□□□ -0.3
COPA-201ENST00000241704 KRT28Q7Z3Y7 464 aa13.18□□□□□ -0.3
COPA-201ENST00000241704 TMEM57Q8N5G2 664 aa13.18□□□□□ -0.3
COPA-201ENST00000241704 CARD14Q9BXL6 1004 aa13.18□□□□□ -0.3
COPA-201ENST00000241704 KIF20AO95235 890 aa13.18□□□□□ -0.3
COPA-201ENST00000241704 POLR3AO14802 1390 aaPredicted RBP13.18□□□□□ -0.3
COPA-201ENST00000241704 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
COPA-201ENST00000241704 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
COPA-201ENST00000241704 CPLX2Q6PUV4 134 aaKnown RBP13.17□□□□□ -0.3
COPA-201ENST00000241704 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
COPA-201ENST00000241704 MSH6P52701 1360 aa13.17□□□□□ -0.3
COPA-201ENST00000241704 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
COPA-201ENST00000241704 PDCL2Q8N4E4 241 aa13.17□□□□□ -0.3
COPA-201ENST00000241704 DHX16O60231 1041 aaKnown RBP13.17□□□□□ -0.3
COPA-201ENST00000241704 SEC24BO95487 1268 aa13.17□□□□□ -0.3
COPA-201ENST00000241704 DRC7Q8IY82 874 aa13.17□□□□□ -0.3
COPA-201ENST00000241704 PPIP5K1Q6PFW1 1433 aa13.17□□□□□ -0.3
COPA-201ENST00000241704 IL16Q14005 1332 aa13.17□□□□□ -0.3
COPA-201ENST00000241704 IGHDP01880 384 aa13.16□□□□□ -0.3
COPA-201ENST00000241704 TRDNQ13061 729 aa13.16□□□□□ -0.3
COPA-201ENST00000241704 SAMD9LQ8IVG5 1584 aa13.16□□□□□ -0.3
COPA-201ENST00000241704 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
COPA-201ENST00000241704 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
COPA-201ENST00000241704 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
COPA-201ENST00000241704 CGNQ9P2M7 1197 aaKnown RBP13.16□□□□□ -0.3
COPA-201ENST00000241704 TAF7Q15545 349 aaPredicted RBP13.16□□□□□ -0.3
COPA-201ENST00000241704 CCDC27Q2M243 656 aa13.16□□□□□ -0.3
COPA-201ENST00000241704 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
COPA-201ENST00000241704 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
COPA-201ENST00000241704 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
COPA-201ENST00000241704 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
COPA-201ENST00000241704 CHD1O14646 1710 aa13.15□□□□□ -0.3
COPA-201ENST00000241704 PIK3C2GO75747 1445 aa13.15□□□□□ -0.3
COPA-201ENST00000241704 PTCD1O75127 700 aaKnown RBP13.15□□□□□ -0.3
COPA-201ENST00000241704 FBLN1P23142 703 aa13.15□□□□□ -0.3
COPA-201ENST00000241704 ERC1Q8IUD2 1116 aa13.15□□□□□ -0.3
COPA-201ENST00000241704 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.31
COPA-201ENST00000241704 MYL6BP14649 208 aa13.15□□□□□ -0.31
COPA-201ENST00000241704 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
COPA-201ENST00000241704 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
COPA-201ENST00000241704 CHD1LQ86WJ1 897 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 ZKSCAN5Q9Y2L8 839 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 ATP6V1DQ9Y5K8 247 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 WASHC4Q2M389 1173 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 NPC1L1Q9UHC9 1359 aa13.14□□□□□ -0.31
COPA-201ENST00000241704 PRIMPOLQ96LW4 560 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 EXOC5O00471 708 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 MBD3O95983 291 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 BCL11BQ9C0K0 894 aaPredicted RBP13.13□□□□□ -0.31
COPA-201ENST00000241704 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 CNNM1Q9NRU3 951 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 POLKQ9UBT6 870 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 NPATQ14207 1427 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
COPA-201ENST00000241704 STARD3NLO95772 234 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
COPA-201ENST00000241704 FOXD4L5Q5VV16 416 aaPredicted RBP13.13□□□□□ -0.31
COPA-201ENST00000241704 FOXD4L4Q8WXT5 416 aaPredicted RBP13.13□□□□□ -0.31
COPA-201ENST00000241704 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
COPA-201ENST00000241704 DMTNQ08495 405 aa13.12□□□□□ -0.31
COPA-201ENST00000241704 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
COPA-201ENST00000241704 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
COPA-201ENST00000241704 KDM6BO15054 1643 aa13.12□□□□□ -0.31
COPA-201ENST00000241704 HSP90AB2PQ58FF8 381 aa13.12□□□□□ -0.31
COPA-201ENST00000241704 BICDL1Q6ZP65 573 aa13.12□□□□□ -0.31
COPA-201ENST00000241704 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
COPA-201ENST00000241704 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
COPA-201ENST00000241704 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
COPA-201ENST00000241704 TCEAL9Q9UHQ7 104 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 ABCC1P33527 1531 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 PREX2Q70Z35 1606 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 ERBB4Q15303 1308 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 CFAP74Q9C0B2 1584 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 TRIM27P14373 513 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 MPHOSPH8Q99549 860 aa13.11□□□□□ -0.31
COPA-201ENST00000241704 CPLX1O14810 134 aa13.1□□□□□ -0.31
COPA-201ENST00000241704 TBC1D2BQ9UPU7 963 aa13.1□□□□□ -0.31
COPA-201ENST00000241704 H3BQV1 296 aa13.1□□□□□ -0.31
COPA-201ENST00000241704 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
COPA-201ENST00000241704 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
COPA-201ENST00000241704 ERICH2A1L162 156 aa13.09□□□□□ -0.31
COPA-201ENST00000241704 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms