RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 IL2RBP14784 551 aa12.05□□□□□ -0.48
IFT43-201ENST00000238628 ARHGEF25Q86VW2 580 aa12.05□□□□□ -0.48
IFT43-201ENST00000238628 SMC1BQ8NDV3 1235 aa12.05□□□□□ -0.48
IFT43-201ENST00000238628 ABCC6O95255 1503 aa12.05□□□□□ -0.48
IFT43-201ENST00000238628 PCNTO95613 3336 aa12.04□□□□□ -0.48
IFT43-201ENST00000238628 KIAA1210Q9ULL0 1709 aa12.04□□□□□ -0.48
IFT43-201ENST00000238628 ARHGAP27Q6ZUM4 889 aa12.04□□□□□ -0.48
IFT43-201ENST00000238628 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
IFT43-201ENST00000238628 RGPD5Q99666 1765 aa12.03□□□□□ -0.48
IFT43-201ENST00000238628 SLIT3O75094 1523 aa12.03□□□□□ -0.48
IFT43-201ENST00000238628 KCNH5Q8NCM2 988 aa12.03□□□□□ -0.48
IFT43-201ENST00000238628 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
IFT43-201ENST00000238628 DDX54Q8TDD1 881 aaKnown RBP12.03□□□□□ -0.48
IFT43-201ENST00000238628 RRAGCQ9HB90 399 aa12.03□□□□□ -0.48
IFT43-201ENST00000238628 CABP1Q9NZU7 370 aa12.03□□□□□ -0.48
IFT43-201ENST00000238628 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
IFT43-201ENST00000238628 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
IFT43-201ENST00000238628 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
IFT43-201ENST00000238628 CENPJQ9HC77 1338 aaPredicted RBP12.02□□□□□ -0.49
IFT43-201ENST00000238628 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
IFT43-201ENST00000238628 CICQ96RK0 1608 aaPredicted RBP12□□□□□ -0.49
IFT43-201ENST00000238628 C9orf131Q5VYM1 1079 aa12□□□□□ -0.49
IFT43-201ENST00000238628 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
IFT43-201ENST00000238628 PIK3C2AO00443 1686 aa11.98□□□□□ -0.49
IFT43-201ENST00000238628 PLEKHG2Q9H7P9 1386 aa11.98□□□□□ -0.49
IFT43-201ENST00000238628 FOXN1O15353 648 aa11.98□□□□□ -0.49
IFT43-201ENST00000238628 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
IFT43-201ENST00000238628 QRICH2Q9H0J4 1663 aa11.97□□□□□ -0.49
IFT43-201ENST00000238628 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
IFT43-201ENST00000238628 HMGB2P26583 209 aaKnown RBP11.97□□□□□ -0.49
IFT43-201ENST00000238628 ABHD8Q96I13 439 aa11.97□□□□□ -0.49
IFT43-201ENST00000238628 ANKRD36BQ8N2N9 1353 aa11.96□□□□□ -0.49
IFT43-201ENST00000238628 USP47Q96K76 1375 aa11.96□□□□□ -0.49
IFT43-201ENST00000238628 EVC2Q86UK5 1308 aa11.96□□□□□ -0.49
IFT43-201ENST00000238628 LY75O60449 1722 aa11.96□□□□□ -0.49
IFT43-201ENST00000238628 C10orf71Q711Q0 1435 aa11.95□□□□□ -0.5
IFT43-201ENST00000238628 ERBB3P21860 1342 aa11.95□□□□□ -0.5
IFT43-201ENST00000238628 TTC21BQ7Z4L5 1316 aa11.95□□□□□ -0.5
IFT43-201ENST00000238628 A0A0G2JLW4 131 aa11.95□□□□□ -0.5
IFT43-201ENST00000238628 FCHSD2O94868 740 aa11.95□□□□□ -0.5
IFT43-201ENST00000238628 PHF14O94880 888 aa11.95□□□□□ -0.5
IFT43-201ENST00000238628 SMIM5Q71RC9 77 aa11.95□□□□□ -0.5
IFT43-201ENST00000238628 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
IFT43-201ENST00000238628 CTCFP49711 727 aaPredicted RBP11.94□□□□□ -0.5
IFT43-201ENST00000238628 TGFB2P61812 414 aa11.94□□□□□ -0.5
IFT43-201ENST00000238628 AK7Q96M32 723 aa11.94□□□□□ -0.5
IFT43-201ENST00000238628 RNF181Q9P0P0 153 aa11.94□□□□□ -0.5
IFT43-201ENST00000238628 MKRN1Q9UHC7 482 aaKnown RBP11.94□□□□□ -0.5
IFT43-201ENST00000238628 NSD2O96028 1365 aa11.93□□□□□ -0.5
IFT43-201ENST00000238628 CCDC85CA6NKD9 419 aa11.93□□□□□ -0.5
IFT43-201ENST00000238628 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
IFT43-201ENST00000238628 TTC21AQ8NDW8 1320 aa11.92□□□□□ -0.5
IFT43-201ENST00000238628 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
IFT43-201ENST00000238628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
IFT43-201ENST00000238628 RGS19P49795 217 aa11.91□□□□□ -0.5
IFT43-201ENST00000238628 LBX1P52954 281 aa11.91□□□□□ -0.5
IFT43-201ENST00000238628 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
IFT43-201ENST00000238628 VEGFAP15692 232 aaPredicted RBP11.9□□□□□ -0.5
IFT43-201ENST00000238628 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
IFT43-201ENST00000238628 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
IFT43-201ENST00000238628 DOT1LQ8TEK3 1739 aa11.89□□□□□ -0.51
IFT43-201ENST00000238628 MMP10P09238 476 aa11.89□□□□□ -0.51
IFT43-201ENST00000238628 DPEP1P16444 411 aa11.89□□□□□ -0.51
IFT43-201ENST00000238628 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
IFT43-201ENST00000238628 N4BP2Q86UW6 1770 aaPredicted RBP11.89□□□□□ -0.51
IFT43-201ENST00000238628 C5P01031 1676 aa11.88□□□□□ -0.51
IFT43-201ENST00000238628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
IFT43-201ENST00000238628 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
IFT43-201ENST00000238628 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
IFT43-201ENST00000238628 NFAT5O94916 1531 aa11.87□□□□□ -0.51
IFT43-201ENST00000238628 ZCRB1Q8TBF4 217 aaKnown RBP11.87□□□□□ -0.51
IFT43-201ENST00000238628 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
IFT43-201ENST00000238628 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
IFT43-201ENST00000238628 SSFA2P28290 1259 aa11.86□□□□□ -0.51
IFT43-201ENST00000238628 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
IFT43-201ENST00000238628 SIN3AQ96ST3 1273 aa11.86□□□□□ -0.51
IFT43-201ENST00000238628 ROCK2O75116 1388 aaKnown RBP11.86□□□□□ -0.51
IFT43-201ENST00000238628 PALLDQ8WX93 1383 aa11.86□□□□□ -0.51
IFT43-201ENST00000238628 LTN1O94822 1766 aa11.85□□□□□ -0.51
IFT43-201ENST00000238628 LTV1Q96GA3 475 aaPredicted RBP11.85□□□□□ -0.51
IFT43-201ENST00000238628 CCDC87Q9NVE4 849 aa11.85□□□□□ -0.51
IFT43-201ENST00000238628 PIM2Q9P1W9 311 aa11.85□□□□□ -0.51
IFT43-201ENST00000238628 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
IFT43-201ENST00000238628 MON2Q7Z3U7 1717 aa11.84□□□□□ -0.51
IFT43-201ENST00000238628 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
IFT43-201ENST00000238628 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
IFT43-201ENST00000238628 NME9Q86XW9 330 aa11.84□□□□□ -0.51
IFT43-201ENST00000238628 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
IFT43-201ENST00000238628 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
IFT43-201ENST00000238628 WBP1LQ9NX94 342 aa11.84□□□□□ -0.51
IFT43-201ENST00000238628 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.51
IFT43-201ENST00000238628 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
IFT43-201ENST00000238628 CNTNAP1P78357 1384 aa11.83□□□□□ -0.52
IFT43-201ENST00000238628 DALRD3Q5D0E6 543 aaKnown RBP11.83□□□□□ -0.52
IFT43-201ENST00000238628 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
IFT43-201ENST00000238628 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.52
IFT43-201ENST00000238628 KIAA1551Q9HCM1 1747 aa11.83□□□□□ -0.52
IFT43-201ENST00000238628 HSPA8P11142 646 aaKnown RBP11.82□□□□□ -0.52
IFT43-201ENST00000238628 KCNA3P22001 575 aa11.82□□□□□ -0.52
IFT43-201ENST00000238628 HDGFL2Q7Z4V5 671 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms