RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ALKQ9UM73 1620 aa19.06■□□□□ 0.64
DDX55-201ENST00000238146 CEP85Q6P2H3 762 aa19.06■□□□□ 0.64
DDX55-201ENST00000238146 SMARCA5O60264 1052 aaPredicted RBP19.06■□□□□ 0.64
DDX55-201ENST00000238146 PDCL3Q9H2J4 239 aa19.06■□□□□ 0.64
DDX55-201ENST00000238146 RBM27Q9P2N5 1060 aaKnown RBP19.06■□□□□ 0.64
DDX55-201ENST00000238146 DIP2CQ9Y2E4 1556 aa19.05■□□□□ 0.64
DDX55-201ENST00000238146 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
DDX55-201ENST00000238146 CASC1Q6TDU7 716 aa19.05■□□□□ 0.64
DDX55-201ENST00000238146 WAPLQ7Z5K2 1190 aa19.05■□□□□ 0.64
DDX55-201ENST00000238146 NOL7Q9UMY1 257 aaKnown RBP19.05■□□□□ 0.64
DDX55-201ENST00000238146 NME9Q86XW9 330 aa19.05■□□□□ 0.64
DDX55-201ENST00000238146 PKNOX2Q96KN3 472 aa19.05■□□□□ 0.64
DDX55-201ENST00000238146 ZRANB1Q9UGI0 708 aa19.05■□□□□ 0.64
DDX55-201ENST00000238146 DLG5Q8TDM6 1919 aa19.04■□□□□ 0.64
DDX55-201ENST00000238146 RGS12O14924 1447 aa19.04■□□□□ 0.64
DDX55-201ENST00000238146 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.04■□□□□ 0.64
DDX55-201ENST00000238146 APBB1O00213 710 aa19.04■□□□□ 0.64
DDX55-201ENST00000238146 TERF1P54274 439 aa19.04■□□□□ 0.64
DDX55-201ENST00000238146 REC8O95072 547 aa19.03■□□□□ 0.64
DDX55-201ENST00000238146 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
DDX55-201ENST00000238146 CHAMP1Q96JM3 812 aa19.03■□□□□ 0.64
DDX55-201ENST00000238146 CPSF1Q10570 1443 aaKnown RBP19.02■□□□□ 0.64
DDX55-201ENST00000238146 ZNF500O60304 480 aaPredicted RBP19.02■□□□□ 0.64
DDX55-201ENST00000238146 RTL1A6NKG5 1358 aa19.02■□□□□ 0.64
DDX55-201ENST00000238146 AATKQ6ZMQ8 1374 aa19.02■□□□□ 0.64
DDX55-201ENST00000238146 TMEM63CQ9P1W3 806 aa19.02■□□□□ 0.63
DDX55-201ENST00000238146 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
DDX55-201ENST00000238146 PREX1Q8TCU6 1659 aa19.01■□□□□ 0.63
DDX55-201ENST00000238146 EDC4Q6P2E9 1401 aaKnown RBP19.01■□□□□ 0.63
DDX55-201ENST00000238146 MSH6P52701 1360 aa19■□□□□ 0.63
DDX55-201ENST00000238146 ERC2O15083 957 aa19■□□□□ 0.63
DDX55-201ENST00000238146 FBXO31Q5XUX0 539 aaPredicted RBP19■□□□□ 0.63
DDX55-201ENST00000238146 MEIS3Q99687 375 aa19■□□□□ 0.63
DDX55-201ENST00000238146 NSFL1CQ9UNZ2 370 aaKnown RBP19■□□□□ 0.63
DDX55-201ENST00000238146 LRSAM1Q6UWE0 723 aa19■□□□□ 0.63
DDX55-201ENST00000238146 R3HCC1Q9Y3T6 440 aaKnown RBP18.99■□□□□ 0.63
DDX55-201ENST00000238146 SYCE3A1L190 88 aa18.98■□□□□ 0.63
DDX55-201ENST00000238146 XPCQ01831 940 aaPredicted RBP18.98■□□□□ 0.63
DDX55-201ENST00000238146 ZKSCAN5Q9Y2L8 839 aa18.98■□□□□ 0.63
DDX55-201ENST00000238146 NEO1Q92859 1461 aa18.98■□□□□ 0.63
DDX55-201ENST00000238146 CHL1O00533 1208 aa18.97■□□□□ 0.63
DDX55-201ENST00000238146 HAP1P54257 671 aaPredicted RBP18.97■□□□□ 0.63
DDX55-201ENST00000238146 COG3Q96JB2 828 aa18.97■□□□□ 0.63
DDX55-201ENST00000238146 FOXD4L5Q5VV16 416 aaPredicted RBP18.97■□□□□ 0.63
DDX55-201ENST00000238146 FOXD4L4Q8WXT5 416 aaPredicted RBP18.97■□□□□ 0.63
DDX55-201ENST00000238146 DLC1Q96QB1 1528 aa18.96■□□□□ 0.63
DDX55-201ENST00000238146 PTPRCP08575 1304 aa18.96■□□□□ 0.63
DDX55-201ENST00000238146 NEK4P51957 841 aa18.96■□□□□ 0.63
DDX55-201ENST00000238146 TMX3Q96JJ7 454 aa18.96■□□□□ 0.63
DDX55-201ENST00000238146 RBM10P98175 930 aaKnown RBP18.96■□□□□ 0.63
DDX55-201ENST00000238146 AEBP1Q8IUX7 1158 aa18.96■□□□□ 0.63
DDX55-201ENST00000238146 OSBPL3Q9H4L5 887 aa18.96■□□□□ 0.63
DDX55-201ENST00000238146 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
DDX55-201ENST00000238146 PDE1AP54750 535 aa18.95■□□□□ 0.62
DDX55-201ENST00000238146 WASLO00401 505 aaPredicted RBP18.94■□□□□ 0.62
DDX55-201ENST00000238146 KIAA0232Q92628 1395 aa18.94■□□□□ 0.62
DDX55-201ENST00000238146 MBD3O95983 291 aa18.94■□□□□ 0.62
DDX55-201ENST00000238146 MCM5P33992 734 aa18.94■□□□□ 0.62
DDX55-201ENST00000238146 BRD1O95696 1058 aa18.93■□□□□ 0.62
DDX55-201ENST00000238146 MCM10Q7L590 875 aa18.93■□□□□ 0.62
DDX55-201ENST00000238146 CPS1P31327 1500 aa18.93■□□□□ 0.62
DDX55-201ENST00000238146 HMMRO75330 724 aa18.93■□□□□ 0.62
DDX55-201ENST00000238146 NCKAP5LQ9HCH0 1330 aa18.92■□□□□ 0.62
DDX55-201ENST00000238146 SULT6B1Q6IMI4 303 aa18.92■□□□□ 0.62
DDX55-201ENST00000238146 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
DDX55-201ENST00000238146 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
DDX55-201ENST00000238146 CUL4AQ13619 759 aa18.91■□□□□ 0.62
DDX55-201ENST00000238146 RNF214Q8ND24 703 aa18.91■□□□□ 0.62
DDX55-201ENST00000238146 MCM2P49736 904 aa18.91■□□□□ 0.62
DDX55-201ENST00000238146 FAM13BQ9NYF5 915 aa18.91■□□□□ 0.62
DDX55-201ENST00000238146 UQCRHLA0A096LP55 91 aa18.9■□□□□ 0.62
DDX55-201ENST00000238146 UQCRHP07919 91 aa18.9■□□□□ 0.62
DDX55-201ENST00000238146 EIF4A2Q14240 407 aaKnown RBP18.9■□□□□ 0.62
DDX55-201ENST00000238146 CSPP1Q1MSJ5 1256 aa18.9■□□□□ 0.62
DDX55-201ENST00000238146 NUDT16Q96DE0 195 aaKnown RBP18.9■□□□□ 0.62
DDX55-201ENST00000238146 ESYT1Q9BSJ8 1104 aa18.9■□□□□ 0.62
DDX55-201ENST00000238146 TSHZ3Q63HK5 1081 aa18.89■□□□□ 0.62
DDX55-201ENST00000238146 PALD1Q9ULE6 856 aa18.89■□□□□ 0.62
DDX55-201ENST00000238146 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.89■□□□□ 0.61
DDX55-201ENST00000238146 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
DDX55-201ENST00000238146 SALL3Q9BXA9 1300 aa18.88■□□□□ 0.61
DDX55-201ENST00000238146 F6X3S4 739 aa18.88■□□□□ 0.61
DDX55-201ENST00000238146 G2E3Q7L622 706 aa18.88■□□□□ 0.61
DDX55-201ENST00000238146 CCDC61Q9Y6R9 512 aa18.88■□□□□ 0.61
DDX55-201ENST00000238146 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
DDX55-201ENST00000238146 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
DDX55-201ENST00000238146 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
DDX55-201ENST00000238146 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
DDX55-201ENST00000238146 INTS4Q96HW7 963 aaKnown RBP18.87■□□□□ 0.61
DDX55-201ENST00000238146 MAP7D2Q96T17 732 aa18.87■□□□□ 0.61
DDX55-201ENST00000238146 EXOC6BQ9Y2D4 811 aa18.87■□□□□ 0.61
DDX55-201ENST00000238146 TSPY26PQ9H489 355 aa18.87■□□□□ 0.61
DDX55-201ENST00000238146 ANAPC15P60006 121 aa18.86■□□□□ 0.61
DDX55-201ENST00000238146 NOL8Q76FK4 1167 aaKnown RBP18.86■□□□□ 0.61
DDX55-201ENST00000238146 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
DDX55-201ENST00000238146 SETD1AO15047 1707 aaKnown RBP18.85■□□□□ 0.61
DDX55-201ENST00000238146 MCCP23508 829 aa18.85■□□□□ 0.61
DDX55-201ENST00000238146 CCT4P50991 539 aaKnown RBP18.85■□□□□ 0.61
DDX55-201ENST00000238146 CRB1P82279 1406 aa18.85■□□□□ 0.61
DDX55-201ENST00000238146 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms