RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 PDE4AP27815 886 aa20.45■□□□□ 0.86
ITGA4-201ENST00000233573 IP6K1Q92551 441 aa20.45■□□□□ 0.86
ITGA4-201ENST00000233573 BACH2Q9BYV9 841 aa20.45■□□□□ 0.86
ITGA4-201ENST00000233573 PCDHB15Q9Y5E8 787 aa20.45■□□□□ 0.86
ITGA4-201ENST00000233573 TNS3Q68CZ2 1445 aa20.44■□□□□ 0.86
ITGA4-201ENST00000233573 PHRF1Q9P1Y6 1649 aaKnown RBP20.44■□□□□ 0.86
ITGA4-201ENST00000233573 ARHGEF25Q86VW2 580 aa20.43■□□□□ 0.86
ITGA4-201ENST00000233573 FTSJ3Q8IY81 847 aaKnown RBP20.43■□□□□ 0.86
ITGA4-201ENST00000233573 CABLES1Q8TDN4 633 aa20.43■□□□□ 0.86
ITGA4-201ENST00000233573 MSH5O43196 834 aa20.42■□□□□ 0.86
ITGA4-201ENST00000233573 USHBP1Q8N6Y0 703 aa20.42■□□□□ 0.86
ITGA4-201ENST00000233573 CRB1P82279 1406 aa20.42■□□□□ 0.86
ITGA4-201ENST00000233573 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
ITGA4-201ENST00000233573 ZC3H6P61129 1189 aaKnown RBP20.41■□□□□ 0.86
ITGA4-201ENST00000233573 MTHFSDQ2M296 383 aaKnown RBP20.41■□□□□ 0.86
ITGA4-201ENST00000233573 MRPL50Q8N5N7 158 aaKnown RBP20.41■□□□□ 0.86
ITGA4-201ENST00000233573 C8orf58Q8NAV2 365 aa20.41■□□□□ 0.86
ITGA4-201ENST00000233573 SPATA31A3Q5VYP0 1347 aa20.41■□□□□ 0.86
ITGA4-201ENST00000233573 CHL1O00533 1208 aa20.41■□□□□ 0.86
ITGA4-201ENST00000233573 IPO8O15397 1037 aaKnown RBP20.41■□□□□ 0.86
ITGA4-201ENST00000233573 TWISTNBQ3B726 338 aaPredicted RBP20.39■□□□□ 0.86
ITGA4-201ENST00000233573 MCM10Q7L590 875 aa20.39■□□□□ 0.86
ITGA4-201ENST00000233573 RGPD5Q99666 1765 aa20.39■□□□□ 0.85
ITGA4-201ENST00000233573 DDX19BQ9UMR2 479 aa20.39■□□□□ 0.85
ITGA4-201ENST00000233573 CRYBG1Q9Y4K1 1723 aa20.38■□□□□ 0.85
ITGA4-201ENST00000233573 TMEM57Q8N5G2 664 aa20.38■□□□□ 0.85
ITGA4-201ENST00000233573 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
ITGA4-201ENST00000233573 LRRC59Q96AG4 307 aaKnown RBP20.38■□□□□ 0.85
ITGA4-201ENST00000233573 AXIN2Q9Y2T1 843 aa20.38■□□□□ 0.85
ITGA4-201ENST00000233573 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
ITGA4-201ENST00000233573 NBPF6Q5VWK0 638 aa20.38■□□□□ 0.85
ITGA4-201ENST00000233573 NBPF4Q96M43 638 aa20.38■□□□□ 0.85
ITGA4-201ENST00000233573 KIAA0232Q92628 1395 aa20.36■□□□□ 0.85
ITGA4-201ENST00000233573 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
ITGA4-201ENST00000233573 LTBP4Q8N2S1 1624 aa20.36■□□□□ 0.85
ITGA4-201ENST00000233573 SOS2Q07890 1332 aaPredicted RBP20.36■□□□□ 0.85
ITGA4-201ENST00000233573 GAS2L2Q8NHY3 880 aa20.36■□□□□ 0.85
ITGA4-201ENST00000233573 ITPRIPQ8IWB1 547 aa20.35■□□□□ 0.85
ITGA4-201ENST00000233573 ZBTB40Q9NUA8 1239 aa20.34■□□□□ 0.85
ITGA4-201ENST00000233573 ANKRD24Q8TF21 1146 aa20.34■□□□□ 0.85
ITGA4-201ENST00000233573 NHSL1Q5SYE7 1610 aa20.34■□□□□ 0.85
ITGA4-201ENST00000233573 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
ITGA4-201ENST00000233573 RWDD1Q9H446 243 aaPredicted RBP20.33■□□□□ 0.85
ITGA4-201ENST00000233573 RGS3P49796 1198 aa20.32■□□□□ 0.84
ITGA4-201ENST00000233573 ABCC4O15439 1325 aa20.32■□□□□ 0.84
ITGA4-201ENST00000233573 CHRNA2Q15822 529 aa20.31■□□□□ 0.84
ITGA4-201ENST00000233573 HDAC1Q13547 482 aaPredicted RBP20.31■□□□□ 0.84
ITGA4-201ENST00000233573 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
ITGA4-201ENST00000233573 C8orf34Q49A92 452 aa20.31■□□□□ 0.84
ITGA4-201ENST00000233573 COL18A1P39060 1754 aa20.31■□□□□ 0.84
ITGA4-201ENST00000233573 FAM161AQ3B820 660 aa20.3■□□□□ 0.84
ITGA4-201ENST00000233573 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
ITGA4-201ENST00000233573 NCAPD2Q15021 1401 aa20.29■□□□□ 0.84
ITGA4-201ENST00000233573 ERBB3P21860 1342 aa20.29■□□□□ 0.84
ITGA4-201ENST00000233573 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
ITGA4-201ENST00000233573 VIRMAQ69YN4 1812 aaKnown RBP20.28■□□□□ 0.84
ITGA4-201ENST00000233573 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
ITGA4-201ENST00000233573 ANP32AP39687 249 aaKnown RBP20.28■□□□□ 0.84
ITGA4-201ENST00000233573 HAP1P54257 671 aaPredicted RBP20.28■□□□□ 0.84
ITGA4-201ENST00000233573 ABCA3Q99758 1704 aa20.27■□□□□ 0.84
ITGA4-201ENST00000233573 MAP3K5Q99683 1374 aa20.27■□□□□ 0.84
ITGA4-201ENST00000233573 CAMTA1Q9Y6Y1 1673 aa20.27■□□□□ 0.84
ITGA4-201ENST00000233573 ZBTB7BO15156 539 aaPredicted RBP20.27■□□□□ 0.84
ITGA4-201ENST00000233573 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
ITGA4-201ENST00000233573 RGS12O14924 1447 aa20.26■□□□□ 0.83
ITGA4-201ENST00000233573 API5Q9BZZ5 524 aaKnown RBP20.26■□□□□ 0.83
ITGA4-201ENST00000233573 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
ITGA4-201ENST00000233573 IL17REQ8NFR9 667 aa20.25■□□□□ 0.83
ITGA4-201ENST00000233573 IPO9Q96P70 1041 aaKnown RBP20.25■□□□□ 0.83
ITGA4-201ENST00000233573 TSPYL4Q9UJ04 414 aa20.24■□□□□ 0.83
ITGA4-201ENST00000233573 LMO7Q8WWI1 1683 aa20.24■□□□□ 0.83
ITGA4-201ENST00000233573 CPDO75976 1380 aa20.24■□□□□ 0.83
ITGA4-201ENST00000233573 SMC5Q8IY18 1101 aa20.23■□□□□ 0.83
ITGA4-201ENST00000233573 CHMP4BQ9H444 224 aaKnown RBP20.22■□□□□ 0.83
ITGA4-201ENST00000233573 NLRP2Q9NX02 1062 aa20.22■□□□□ 0.83
ITGA4-201ENST00000233573 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
ITGA4-201ENST00000233573 CEMIPQ8WUJ3 1361 aa20.22■□□□□ 0.83
ITGA4-201ENST00000233573 PRDM11Q9NQV5 511 aa20.21■□□□□ 0.83
ITGA4-201ENST00000233573 FAM208AQ9UK61 1670 aaKnown RBP20.21■□□□□ 0.83
ITGA4-201ENST00000233573 CSB-PGBD3P0DP91 1061 aa20.2■□□□□ 0.82
ITGA4-201ENST00000233573 ABCC6O95255 1503 aa20.2■□□□□ 0.82
ITGA4-201ENST00000233573 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
ITGA4-201ENST00000233573 PTPRCP08575 1304 aa20.19■□□□□ 0.82
ITGA4-201ENST00000233573 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
ITGA4-201ENST00000233573 NPM2Q86SE8 214 aaKnown RBP20.18■□□□□ 0.82
ITGA4-201ENST00000233573 ANP32EQ9BTT0 268 aa20.18■□□□□ 0.82
ITGA4-201ENST00000233573 AHDC1Q5TGY3 1603 aaPredicted RBP20.18■□□□□ 0.82
ITGA4-201ENST00000233573 TAF7Q15545 349 aaPredicted RBP20.17■□□□□ 0.82
ITGA4-201ENST00000233573 SOS1Q07889 1333 aaPredicted RBP20.16■□□□□ 0.82
ITGA4-201ENST00000233573 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
ITGA4-201ENST00000233573 MEGF6O75095 1541 aa20.16■□□□□ 0.82
ITGA4-201ENST00000233573 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
ITGA4-201ENST00000233573 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
ITGA4-201ENST00000233573 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
ITGA4-201ENST00000233573 NOP58Q9Y2X3 529 aaKnown RBP20.15■□□□□ 0.82
ITGA4-201ENST00000233573 SIRT2Q8IXJ6 389 aa20.15■□□□□ 0.82
ITGA4-201ENST00000233573 CACNA1FO60840 1977 aa20.15■□□□□ 0.82
ITGA4-201ENST00000233573 PIP4K2BP78356 416 aa20.14■□□□□ 0.81
ITGA4-201ENST00000233573 C1orf115Q9H7X2 142 aa20.14■□□□□ 0.81
ITGA4-201ENST00000233573 COL5A2P05997 1499 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms