RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ANKRD18AQ8IVF6 992 aa13.61□□□□□ -0.23
LAMA4-201ENST00000230538 UBAC1Q9BSL1 405 aa13.61□□□□□ -0.23
LAMA4-201ENST00000230538 CFAP45Q9UL16 551 aa13.61□□□□□ -0.23
LAMA4-201ENST00000230538 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
LAMA4-201ENST00000230538 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
LAMA4-201ENST00000230538 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
LAMA4-201ENST00000230538 SEPT11Q9NVA2 429 aaKnown RBP13.6□□□□□ -0.23
LAMA4-201ENST00000230538 ERLIN1O75477 346 aa13.6□□□□□ -0.23
LAMA4-201ENST00000230538 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
LAMA4-201ENST00000230538 DAPK1P53355 1430 aa13.59□□□□□ -0.23
LAMA4-201ENST00000230538 PRG4Q92954 1404 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-201ENST00000230538 UQCRHLA0A096LP55 91 aa13.59□□□□□ -0.23
LAMA4-201ENST00000230538 SSBP05455 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
LAMA4-201ENST00000230538 UQCRHP07919 91 aa13.59□□□□□ -0.23
LAMA4-201ENST00000230538 NUP62CLQ9H1M0 184 aa13.59□□□□□ -0.23
LAMA4-201ENST00000230538 BMP2KQ9NSY1 1161 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-201ENST00000230538 NUTM2BA6NNL0 878 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-201ENST00000230538 NUTM2EB1AL46 878 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-201ENST00000230538 KRT32Q14532 448 aa13.59□□□□□ -0.23
LAMA4-201ENST00000230538 NUTM2AQ8IVF1 878 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-201ENST00000230538 CEP57L1Q8IYX8 460 aa13.59□□□□□ -0.23
LAMA4-201ENST00000230538 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-201ENST00000230538 RAI14Q9P0K7 980 aa13.59□□□□□ -0.23
LAMA4-201ENST00000230538 KIAA0754O94854 1291 aa13.58□□□□□ -0.23
LAMA4-201ENST00000230538 CEP126Q9P2H0 1117 aa13.58□□□□□ -0.23
LAMA4-201ENST00000230538 IL1RAPL2Q9NP60 686 aa13.58□□□□□ -0.24
LAMA4-201ENST00000230538 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
LAMA4-201ENST00000230538 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
LAMA4-201ENST00000230538 WASF1Q92558 559 aa13.58□□□□□ -0.24
LAMA4-201ENST00000230538 EIF3JO75822 258 aaKnown RBP13.58□□□□□ -0.24
LAMA4-201ENST00000230538 IQCEQ6IPM2 695 aa13.58□□□□□ -0.24
LAMA4-201ENST00000230538 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
LAMA4-201ENST00000230538 ZSCAN29Q8IWY8 852 aaPredicted RBP13.58□□□□□ -0.24
LAMA4-201ENST00000230538 CENPHQ9H3R5 247 aa13.58□□□□□ -0.24
LAMA4-201ENST00000230538 UPF3BQ9BZI7 483 aaKnown RBP13.57□□□□□ -0.24
LAMA4-201ENST00000230538 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
LAMA4-201ENST00000230538 NUTM1Q86Y26 1132 aa13.57□□□□□ -0.24
LAMA4-201ENST00000230538 TMEM57Q8N5G2 664 aa13.57□□□□□ -0.24
LAMA4-201ENST00000230538 LRP2BPQ9P2M1 347 aa13.57□□□□□ -0.24
LAMA4-201ENST00000230538 SMTNL1A8MU46 457 aa13.57□□□□□ -0.24
LAMA4-201ENST00000230538 ZNF76P36508 570 aa13.57□□□□□ -0.24
LAMA4-201ENST00000230538 NSD3Q9BZ95 1437 aa13.57□□□□□ -0.24
LAMA4-201ENST00000230538 MATR3P43243 847 aaKnown RBP eCLIP13.57□□□□□ -0.24
LAMA4-201ENST00000230538 PLEKHH2Q8IVE3 1493 aa13.57□□□□□ -0.24
LAMA4-201ENST00000230538 PIBF1Q8WXW3 757 aa13.56□□□□□ -0.24
LAMA4-201ENST00000230538 FAM193AP78312 1265 aa13.56□□□□□ -0.24
LAMA4-201ENST00000230538 CASTP20810 708 aaKnown RBP13.56□□□□□ -0.24
LAMA4-201ENST00000230538 IMMTQ16891 758 aaKnown RBP13.56□□□□□ -0.24
LAMA4-201ENST00000230538 TAX1BP1Q86VP1 789 aa13.56□□□□□ -0.24
LAMA4-201ENST00000230538 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
LAMA4-201ENST00000230538 IGHMBP2P38935 993 aaKnown RBP13.56□□□□□ -0.24
LAMA4-201ENST00000230538 SLFN5Q08AF3 891 aa13.56□□□□□ -0.24
LAMA4-201ENST00000230538 ANKRD30BQ9BXX2 1392 aa13.55□□□□□ -0.24
LAMA4-201ENST00000230538 CEP131Q9UPN4 1083 aa13.55□□□□□ -0.24
LAMA4-201ENST00000230538 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
LAMA4-201ENST00000230538 IDH1O75874 414 aaKnown RBP13.55□□□□□ -0.24
LAMA4-201ENST00000230538 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
LAMA4-201ENST00000230538 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
LAMA4-201ENST00000230538 MCM4P33991 863 aa13.55□□□□□ -0.24
LAMA4-201ENST00000230538 KIAA1328Q86T90 577 aa13.55□□□□□ -0.24
LAMA4-201ENST00000230538 AIDAQ96BJ3 306 aa13.55□□□□□ -0.24
LAMA4-201ENST00000230538 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
LAMA4-201ENST00000230538 USP5P45974 858 aa13.55□□□□□ -0.24
LAMA4-201ENST00000230538 SMARCA5O60264 1052 aaPredicted RBP13.54□□□□□ -0.24
LAMA4-201ENST00000230538 FCHSD2O94868 740 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 EIF5P55010 431 aaKnown RBP13.54□□□□□ -0.24
LAMA4-201ENST00000230538 CAMK4Q16566 473 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 LRRFIP2Q9Y608 721 aaKnown RBP13.54□□□□□ -0.24
LAMA4-201ENST00000230538 ATAD2Q6PL18 1390 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 DDX11Q96FC9 970 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 EPB41L2O43491 1005 aaKnown RBP13.54□□□□□ -0.24
LAMA4-201ENST00000230538 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
LAMA4-201ENST00000230538 NFE2L2Q16236 605 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 BICDL1Q6ZP65 573 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 FILIP1Q7Z7B0 1213 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 SKAP1Q86WV1 359 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
LAMA4-201ENST00000230538 DESP17661 470 aa13.53□□□□□ -0.24
LAMA4-201ENST00000230538 SYCE3A1L190 88 aa13.53□□□□□ -0.24
LAMA4-201ENST00000230538 GBP2P32456 591 aaPredicted RBP13.53□□□□□ -0.24
LAMA4-201ENST00000230538 PRDM11Q9NQV5 511 aa13.53□□□□□ -0.24
LAMA4-201ENST00000230538 HSP90AB3PQ58FF7 597 aa13.53□□□□□ -0.24
LAMA4-201ENST00000230538 MAP3K11Q16584 847 aa13.53□□□□□ -0.24
LAMA4-201ENST00000230538 PDIA4P13667 645 aaKnown RBP13.53□□□□□ -0.24
LAMA4-201ENST00000230538 TAF4BQ92750 862 aa13.53□□□□□ -0.24
LAMA4-201ENST00000230538 JAKMIP3Q5VZ66 844 aa13.52□□□□□ -0.24
LAMA4-201ENST00000230538 TOP2BQ02880 1626 aa13.52□□□□□ -0.24
LAMA4-201ENST00000230538 TMPOP42166 694 aaKnown RBP13.52□□□□□ -0.25
LAMA4-201ENST00000230538 ZNF397Q8NF99 534 aaPredicted RBP13.52□□□□□ -0.25
LAMA4-201ENST00000230538 METTL24Q5JXM2 366 aa13.52□□□□□ -0.25
LAMA4-201ENST00000230538 CDK13Q14004 1512 aaKnown RBP13.51□□□□□ -0.25
LAMA4-201ENST00000230538 CFAP100Q494V2 611 aa13.51□□□□□ -0.25
LAMA4-201ENST00000230538 CCDC148Q8NFR7 591 aa13.51□□□□□ -0.25
LAMA4-201ENST00000230538 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
LAMA4-201ENST00000230538 RPGRIP1LQ68CZ1 1315 aa13.51□□□□□ -0.25
LAMA4-201ENST00000230538 NEBLO76041 1014 aa13.51□□□□□ -0.25
LAMA4-201ENST00000230538 EZRP15311 586 aaKnown RBP13.51□□□□□ -0.25
LAMA4-201ENST00000230538 SSR1P43307 286 aaKnown RBP13.51□□□□□ -0.25
LAMA4-201ENST00000230538 CCDC102AQ96A19 550 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms