RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 YTHDC2Q9H6S0 1430 aaKnown RBP11.76□□□□□ -0.53
HLA-DOA-201ENST00000229829 HDGFL2Q7Z4V5 671 aaPredicted RBP11.76□□□□□ -0.53
HLA-DOA-201ENST00000229829 LRP6O75581 1613 aa11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 PTPRUQ92729 1446 aa11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 NUCB1Q02818 461 aa11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 POLKQ9UBT6 870 aa11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 SLIT3O75094 1523 aa11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 PNPLA6Q8IY17 1366 aa11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 LRP5O75197 1615 aa11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 TNS1Q9HBL0 1735 aaKnown RBP11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 ANKARQ7Z5J8 1434 aa11.75□□□□□ -0.53
HLA-DOA-201ENST00000229829 IPO8O15397 1037 aaKnown RBP11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 PXDNQ92626 1479 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 KIF16BQ96L93 1317 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 TRAK2O60296 914 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 FCHSD2O94868 740 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 CHD1LQ86WJ1 897 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 ADAMTS7Q9UKP4 1686 aa11.74□□□□□ -0.53
HLA-DOA-201ENST00000229829 CHMP5Q9NZZ3 219 aa11.73□□□□□ -0.53
HLA-DOA-201ENST00000229829 ANKRD45Q5TZF3 282 aa11.73□□□□□ -0.53
HLA-DOA-201ENST00000229829 ANP32BQ92688 251 aaKnown RBP11.73□□□□□ -0.53
HLA-DOA-201ENST00000229829 ZBTB7BO15156 539 aaPredicted RBP11.73□□□□□ -0.53
HLA-DOA-201ENST00000229829 VAMP4O75379 141 aa11.73□□□□□ -0.53
HLA-DOA-201ENST00000229829 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
HLA-DOA-201ENST00000229829 R3HCC1Q9Y3T6 440 aaKnown RBP11.73□□□□□ -0.53
HLA-DOA-201ENST00000229829 ALDH1L2Q3SY69 923 aa11.72□□□□□ -0.53
HLA-DOA-201ENST00000229829 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
HLA-DOA-201ENST00000229829 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
HLA-DOA-201ENST00000229829 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
HLA-DOA-201ENST00000229829 PPIP5K1Q6PFW1 1433 aa11.72□□□□□ -0.53
HLA-DOA-201ENST00000229829 HSCBQ8IWL3 235 aa11.72□□□□□ -0.53
HLA-DOA-201ENST00000229829 NCLP19338 710 aaKnown RBP11.71□□□□□ -0.53
HLA-DOA-201ENST00000229829 MSNP26038 577 aaKnown RBP11.71□□□□□ -0.53
HLA-DOA-201ENST00000229829 SIRT2Q8IXJ6 389 aa11.71□□□□□ -0.53
HLA-DOA-201ENST00000229829 PDCL3Q9H2J4 239 aa11.71□□□□□ -0.53
HLA-DOA-201ENST00000229829 PDE4CQ08493 712 aa11.71□□□□□ -0.54
HLA-DOA-201ENST00000229829 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.54
HLA-DOA-201ENST00000229829 GRPEL1Q9HAV7 217 aa11.71□□□□□ -0.54
HLA-DOA-201ENST00000229829 ERBB4Q15303 1308 aa11.71□□□□□ -0.54
HLA-DOA-201ENST00000229829 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.54
HLA-DOA-201ENST00000229829 FAM83GA6ND36 823 aa11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 CD2BP2O95400 341 aaKnown RBP11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 FBXO41Q8TF61 875 aa11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 NFE2L2Q16236 605 aa11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 NME9Q86XW9 330 aa11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 MRE11P49959 708 aa11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 KIF2CQ99661 725 aa11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
HLA-DOA-201ENST00000229829 MAP2P11137 1827 aaKnown RBP11.69□□□□□ -0.54
HLA-DOA-201ENST00000229829 ADGRL3Q9HAR2 1447 aa11.69□□□□□ -0.54
HLA-DOA-201ENST00000229829 DCTN1Q14203 1278 aa11.69□□□□□ -0.54
HLA-DOA-201ENST00000229829 C8orf58Q8NAV2 365 aa11.69□□□□□ -0.54
HLA-DOA-201ENST00000229829 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
HLA-DOA-201ENST00000229829 RGPD1P0DJD0 1748 aa11.69□□□□□ -0.54
HLA-DOA-201ENST00000229829 FSD2A1L4K1 749 aa11.69□□□□□ -0.54
HLA-DOA-201ENST00000229829 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
HLA-DOA-201ENST00000229829 DDIT3P35638 169 aa11.68□□□□□ -0.54
HLA-DOA-201ENST00000229829 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
HLA-DOA-201ENST00000229829 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
HLA-DOA-201ENST00000229829 KIF20BQ96Q89 1820 aa11.68□□□□□ -0.54
HLA-DOA-201ENST00000229829 ZBTB22O15209 634 aa11.68□□□□□ -0.54
HLA-DOA-201ENST00000229829 IL13P35225 146 aa11.68□□□□□ -0.54
HLA-DOA-201ENST00000229829 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
HLA-DOA-201ENST00000229829 TPM2P07951 284 aa11.67□□□□□ -0.54
HLA-DOA-201ENST00000229829 TBC1D9Q6ZT07 1266 aa11.67□□□□□ -0.54
HLA-DOA-201ENST00000229829 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
HLA-DOA-201ENST00000229829 TWISTNBQ3B726 338 aaPredicted RBP11.67□□□□□ -0.54
HLA-DOA-201ENST00000229829 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
HLA-DOA-201ENST00000229829 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
HLA-DOA-201ENST00000229829 ZNF853P0CG23 659 aa11.66□□□□□ -0.54
HLA-DOA-201ENST00000229829 GNAI1P63096 354 aa11.66□□□□□ -0.54
HLA-DOA-201ENST00000229829 SNX21Q969T3 373 aa11.66□□□□□ -0.54
HLA-DOA-201ENST00000229829 KRT24Q2M2I5 525 aa11.65□□□□□ -0.54
HLA-DOA-201ENST00000229829 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
HLA-DOA-201ENST00000229829 IFT57Q9NWB7 429 aa11.65□□□□□ -0.54
HLA-DOA-201ENST00000229829 ATP7BP35670 1465 aa11.65□□□□□ -0.55
HLA-DOA-201ENST00000229829 FGD1P98174 961 aa11.65□□□□□ -0.55
HLA-DOA-201ENST00000229829 TXNDC2Q86VQ3 553 aa11.65□□□□□ -0.55
HLA-DOA-201ENST00000229829 ARHGAP45Q92619 1136 aa11.65□□□□□ -0.55
HLA-DOA-201ENST00000229829 ZNF428Q96B54 188 aa11.65□□□□□ -0.55
HLA-DOA-201ENST00000229829 ABCC4O15439 1325 aa11.64□□□□□ -0.55
HLA-DOA-201ENST00000229829 MLECQ14165 292 aa11.64□□□□□ -0.55
HLA-DOA-201ENST00000229829 C16orf71Q8IYS4 520 aaPredicted RBP11.64□□□□□ -0.55
HLA-DOA-201ENST00000229829 DNTTIP2Q5QJE6 756 aaKnown RBP11.64□□□□□ -0.55
HLA-DOA-201ENST00000229829 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
HLA-DOA-201ENST00000229829 GSPT1P15170 499 aaKnown RBP11.63□□□□□ -0.55
HLA-DOA-201ENST00000229829 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
HLA-DOA-201ENST00000229829 AEBP1Q8IUX7 1158 aa11.63□□□□□ -0.55
HLA-DOA-201ENST00000229829 WASLO00401 505 aaPredicted RBP11.63□□□□□ -0.55
HLA-DOA-201ENST00000229829 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
HLA-DOA-201ENST00000229829 PKD1L3Q7Z443 1732 aa11.63□□□□□ -0.55
HLA-DOA-201ENST00000229829 SBF2Q86WG5 1849 aa11.62□□□□□ -0.55
HLA-DOA-201ENST00000229829 TMEM132AQ24JP5 1023 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms