RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 ARHGEF10O15013 1369 aa16.52■□□□□ 0.23
PLOD3-201ENST00000223127 ZNF853P0CG23 659 aa16.51■□□□□ 0.23
PLOD3-201ENST00000223127 IGSF1Q8N6C5 1336 aa16.51■□□□□ 0.23
PLOD3-201ENST00000223127 L1TD1Q5T7N2 865 aaKnown RBP16.51■□□□□ 0.23
PLOD3-201ENST00000223127 KRT28Q7Z3Y7 464 aa16.51■□□□□ 0.23
PLOD3-201ENST00000223127 C8orf58Q8NAV2 365 aa16.51■□□□□ 0.23
PLOD3-201ENST00000223127 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
PLOD3-201ENST00000223127 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
PLOD3-201ENST00000223127 VAMP4O75379 141 aa16.5■□□□□ 0.23
PLOD3-201ENST00000223127 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
PLOD3-201ENST00000223127 KRT24Q2M2I5 525 aa16.49■□□□□ 0.23
PLOD3-201ENST00000223127 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
PLOD3-201ENST00000223127 ATF7IPQ6VMQ6 1270 aa16.49■□□□□ 0.23
PLOD3-201ENST00000223127 ITPRIPQ8IWB1 547 aa16.49■□□□□ 0.23
PLOD3-201ENST00000223127 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
PLOD3-201ENST00000223127 MARF1Q9Y4F3 1742 aaKnown RBP16.49■□□□□ 0.23
PLOD3-201ENST00000223127 MVPQ14764 893 aaKnown RBP16.49■□□□□ 0.23
PLOD3-201ENST00000223127 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
PLOD3-201ENST00000223127 GCP02774 474 aa16.48■□□□□ 0.23
PLOD3-201ENST00000223127 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
PLOD3-201ENST00000223127 RGPD1P0DJD0 1748 aa16.48■□□□□ 0.23
PLOD3-201ENST00000223127 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
PLOD3-201ENST00000223127 KDRP35968 1356 aa16.47■□□□□ 0.23
PLOD3-201ENST00000223127 IP6K1Q92551 441 aa16.47■□□□□ 0.23
PLOD3-201ENST00000223127 ALDH1L2Q3SY69 923 aa16.46■□□□□ 0.23
PLOD3-201ENST00000223127 TBC1D32Q96NH3 1257 aa16.46■□□□□ 0.23
PLOD3-201ENST00000223127 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
PLOD3-201ENST00000223127 TMEM57Q8N5G2 664 aa16.46■□□□□ 0.23
PLOD3-201ENST00000223127 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
PLOD3-201ENST00000223127 IPO8O15397 1037 aaKnown RBP16.46■□□□□ 0.22
PLOD3-201ENST00000223127 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.22
PLOD3-201ENST00000223127 KIF24Q5T7B8 1368 aa16.45■□□□□ 0.22
PLOD3-201ENST00000223127 NBPF6Q5VWK0 638 aa16.45■□□□□ 0.22
PLOD3-201ENST00000223127 GAS2L2Q8NHY3 880 aa16.45■□□□□ 0.22
PLOD3-201ENST00000223127 NBPF4Q96M43 638 aa16.45■□□□□ 0.22
PLOD3-201ENST00000223127 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
PLOD3-201ENST00000223127 CHL1O00533 1208 aa16.43■□□□□ 0.22
PLOD3-201ENST00000223127 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
PLOD3-201ENST00000223127 STRCP1A6NGW2 1772 aa16.43■□□□□ 0.22
PLOD3-201ENST00000223127 FSD2A1L4K1 749 aa16.43■□□□□ 0.22
PLOD3-201ENST00000223127 ARXQ96QS3 562 aa16.43■□□□□ 0.22
PLOD3-201ENST00000223127 NFAT5O94916 1531 aa16.43■□□□□ 0.22
PLOD3-201ENST00000223127 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.22
PLOD3-201ENST00000223127 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
PLOD3-201ENST00000223127 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
PLOD3-201ENST00000223127 TSPYL4Q9UJ04 414 aa16.42■□□□□ 0.22
PLOD3-201ENST00000223127 MST1RQ04912 1400 aa16.42■□□□□ 0.22
PLOD3-201ENST00000223127 RTL1A6NKG5 1358 aa16.42■□□□□ 0.22
PLOD3-201ENST00000223127 ARHGEF25Q86VW2 580 aa16.42■□□□□ 0.22
PLOD3-201ENST00000223127 LTN1O94822 1766 aa16.41■□□□□ 0.22
PLOD3-201ENST00000223127 CABLES1Q8TDN4 633 aa16.41■□□□□ 0.22
PLOD3-201ENST00000223127 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
PLOD3-201ENST00000223127 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
PLOD3-201ENST00000223127 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
PLOD3-201ENST00000223127 PANK2Q9BZ23 570 aa16.41■□□□□ 0.22
PLOD3-201ENST00000223127 AXIN2Q9Y2T1 843 aa16.4■□□□□ 0.22
PLOD3-201ENST00000223127 ZNF335Q9H4Z2 1342 aaPredicted RBP16.4■□□□□ 0.22
PLOD3-201ENST00000223127 CRB1P82279 1406 aa16.4■□□□□ 0.22
PLOD3-201ENST00000223127 PDZRN3Q9UPQ7 1066 aa16.4■□□□□ 0.22
PLOD3-201ENST00000223127 MSH6P52701 1360 aa16.4■□□□□ 0.22
PLOD3-201ENST00000223127 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
PLOD3-201ENST00000223127 USP54Q70EL1 1684 aa16.39■□□□□ 0.22
PLOD3-201ENST00000223127 GOLGA6L3A6NEY3 463 aa16.39■□□□□ 0.21
PLOD3-201ENST00000223127 MCM4P33991 863 aa16.39■□□□□ 0.21
PLOD3-201ENST00000223127 ANKRD24Q8TF21 1146 aa16.39■□□□□ 0.21
PLOD3-201ENST00000223127 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
PLOD3-201ENST00000223127 AAMPQ13685 434 aa16.38■□□□□ 0.21
PLOD3-201ENST00000223127 RWDD1Q9H446 243 aaPredicted RBP16.37■□□□□ 0.21
PLOD3-201ENST00000223127 BRPF1P55201 1214 aaPredicted RBP16.37■□□□□ 0.21
PLOD3-201ENST00000223127 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
PLOD3-201ENST00000223127 MAP3K5Q99683 1374 aa16.36■□□□□ 0.21
PLOD3-201ENST00000223127 GZF1Q9H116 711 aaPredicted RBP16.36■□□□□ 0.21
PLOD3-201ENST00000223127 NPHP3Q7Z494 1330 aa16.36■□□□□ 0.21
PLOD3-201ENST00000223127 CLCN1P35523 988 aa16.35■□□□□ 0.21
PLOD3-201ENST00000223127 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
PLOD3-201ENST00000223127 C1orf115Q9H7X2 142 aa16.35■□□□□ 0.21
PLOD3-201ENST00000223127 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
PLOD3-201ENST00000223127 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
PLOD3-201ENST00000223127 ARHGAP45Q92619 1136 aa16.34■□□□□ 0.21
PLOD3-201ENST00000223127 DCCP43146 1447 aa16.34■□□□□ 0.21
PLOD3-201ENST00000223127 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
PLOD3-201ENST00000223127 TRPM3Q9HCF6 1732 aaPredicted RBP16.34■□□□□ 0.21
PLOD3-201ENST00000223127 NAP1L5Q96NT1 182 aaPredicted RBP16.34■□□□□ 0.21
PLOD3-201ENST00000223127 SLIT3O75094 1523 aa16.33■□□□□ 0.21
PLOD3-201ENST00000223127 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.21
PLOD3-201ENST00000223127 SLC4A2P04920 1241 aa16.33■□□□□ 0.21
PLOD3-201ENST00000223127 LGR6Q9HBX8 967 aa16.33■□□□□ 0.21
PLOD3-201ENST00000223127 ZNF530Q6P9A1 599 aaPredicted RBP16.33■□□□□ 0.2
PLOD3-201ENST00000223127 BRINP3Q76B58 766 aa16.33■□□□□ 0.2
PLOD3-201ENST00000223127 NCOA3Q9Y6Q9 1424 aa16.33■□□□□ 0.2
PLOD3-201ENST00000223127 KIAA0232Q92628 1395 aa16.33■□□□□ 0.2
PLOD3-201ENST00000223127 HAP1P54257 671 aaPredicted RBP16.32■□□□□ 0.2
PLOD3-201ENST00000223127 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
PLOD3-201ENST00000223127 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
PLOD3-201ENST00000223127 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
PLOD3-201ENST00000223127 CHMP5Q9NZZ3 219 aa16.32■□□□□ 0.2
PLOD3-201ENST00000223127 RGPD2P0DJD1 1756 aa16.31■□□□□ 0.2
PLOD3-201ENST00000223127 STRCQ7RTU9 1775 aa16.31■□□□□ 0.2
PLOD3-201ENST00000223127 ZBTB7BO15156 539 aaPredicted RBP16.31■□□□□ 0.2
PLOD3-201ENST00000223127 TAF7Q15545 349 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms