RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 NBPF14Q5TI25 921 aa18.56■□□□□ 0.56
UPK1A-201ENST00000222275 ZCRB1Q8TBF4 217 aaKnown RBP18.56■□□□□ 0.56
UPK1A-201ENST00000222275 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
UPK1A-201ENST00000222275 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
UPK1A-201ENST00000222275 PPM1GO15355 546 aaPredicted RBP18.55■□□□□ 0.56
UPK1A-201ENST00000222275 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
UPK1A-201ENST00000222275 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
UPK1A-201ENST00000222275 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
UPK1A-201ENST00000222275 FLT4P35916 1363 aa18.54■□□□□ 0.56
UPK1A-201ENST00000222275 KCNQ4P56696 695 aa18.52■□□□□ 0.56
UPK1A-201ENST00000222275 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
UPK1A-201ENST00000222275 EYA1Q99502 592 aa18.52■□□□□ 0.56
UPK1A-201ENST00000222275 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
UPK1A-201ENST00000222275 LRP5O75197 1615 aa18.5■□□□□ 0.55
UPK1A-201ENST00000222275 ANKRD26Q9UPS8 1709 aa18.5■□□□□ 0.55
UPK1A-201ENST00000222275 CYP27B1O15528 508 aa18.5■□□□□ 0.55
UPK1A-201ENST00000222275 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
UPK1A-201ENST00000222275 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
UPK1A-201ENST00000222275 EIF4A2Q14240 407 aaKnown RBP18.48■□□□□ 0.55
UPK1A-201ENST00000222275 SLC15A2Q16348 729 aa18.48■□□□□ 0.55
UPK1A-201ENST00000222275 ZNF827Q17R98 1081 aa18.48■□□□□ 0.55
UPK1A-201ENST00000222275 RAPGEF4Q8WZA2 1011 aa18.48■□□□□ 0.55
UPK1A-201ENST00000222275 SHANK3Q9BYB0 1731 aa18.48■□□□□ 0.55
UPK1A-201ENST00000222275 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
UPK1A-201ENST00000222275 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
UPK1A-201ENST00000222275 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
UPK1A-201ENST00000222275 RGPD3A6NKT7 1758 aaPredicted RBP18.46■□□□□ 0.55
UPK1A-201ENST00000222275 RGPD4Q7Z3J3 1758 aa18.46■□□□□ 0.55
UPK1A-201ENST00000222275 ZBTB7AO95365 584 aa18.46■□□□□ 0.55
UPK1A-201ENST00000222275 BTAF1O14981 1849 aa18.46■□□□□ 0.55
UPK1A-201ENST00000222275 UTRNP46939 3433 aa18.45■□□□□ 0.54
UPK1A-201ENST00000222275 CC2D1BQ5T0F9 858 aaKnown RBP18.45■□□□□ 0.54
UPK1A-201ENST00000222275 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
UPK1A-201ENST00000222275 STK32BQ9NY57 414 aa18.44■□□□□ 0.54
UPK1A-201ENST00000222275 ATF5Q9Y2D1 282 aaPredicted RBP18.44■□□□□ 0.54
UPK1A-201ENST00000222275 SMG6Q86US8 1419 aaKnown RBP18.43■□□□□ 0.54
UPK1A-201ENST00000222275 PTGER2P43116 358 aa18.43■□□□□ 0.54
UPK1A-201ENST00000222275 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
UPK1A-201ENST00000222275 SPON1Q9HCB6 807 aa18.43■□□□□ 0.54
UPK1A-201ENST00000222275 RALBP1Q15311 655 aa18.41■□□□□ 0.54
UPK1A-201ENST00000222275 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
UPK1A-201ENST00000222275 CASZ1Q86V15 1759 aa18.4■□□□□ 0.54
UPK1A-201ENST00000222275 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
UPK1A-201ENST00000222275 SGIP1Q9BQI5 828 aa18.39■□□□□ 0.53
UPK1A-201ENST00000222275 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
UPK1A-201ENST00000222275 SLC27A3Q5K4L6 730 aa18.38■□□□□ 0.53
UPK1A-201ENST00000222275 MPRIPQ6WCQ1 1025 aa18.38■□□□□ 0.53
UPK1A-201ENST00000222275 PIGBQ92521 554 aa18.38■□□□□ 0.53
UPK1A-201ENST00000222275 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
UPK1A-201ENST00000222275 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
UPK1A-201ENST00000222275 IGSF1Q8N6C5 1336 aa18.37■□□□□ 0.53
UPK1A-201ENST00000222275 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
UPK1A-201ENST00000222275 IL13P35225 146 aa18.36■□□□□ 0.53
UPK1A-201ENST00000222275 CNGB1Q14028 1251 aaPredicted RBP18.36■□□□□ 0.53
UPK1A-201ENST00000222275 GOLGB1Q14789 3259 aaKnown RBP18.36■□□□□ 0.53
UPK1A-201ENST00000222275 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
UPK1A-201ENST00000222275 PHKG2P15735 406 aa18.35■□□□□ 0.53
UPK1A-201ENST00000222275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.53
UPK1A-201ENST00000222275 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
UPK1A-201ENST00000222275 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
UPK1A-201ENST00000222275 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
UPK1A-201ENST00000222275 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
UPK1A-201ENST00000222275 ANP32CO43423 234 aa18.33■□□□□ 0.52
UPK1A-201ENST00000222275 MTHFSP49914 203 aa18.33■□□□□ 0.52
UPK1A-201ENST00000222275 CFAP53Q96M91 514 aa18.33■□□□□ 0.52
UPK1A-201ENST00000222275 MTFR1LQ9H019 292 aa18.33■□□□□ 0.52
UPK1A-201ENST00000222275 TOGARAM1Q9Y4F4 1720 aa18.32■□□□□ 0.52
UPK1A-201ENST00000222275 PPP1R1BQ9UD71 204 aaPredicted RBP18.32■□□□□ 0.52
UPK1A-201ENST00000222275 ASAP1Q9ULH1 1129 aa18.32■□□□□ 0.52
UPK1A-201ENST00000222275 PKD1L3Q7Z443 1732 aa18.32■□□□□ 0.52
UPK1A-201ENST00000222275 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
UPK1A-201ENST00000222275 IFNL2Q8IZJ0 200 aa18.31■□□□□ 0.52
UPK1A-201ENST00000222275 PRKRIP1Q9H875 184 aaPredicted RBP18.31■□□□□ 0.52
UPK1A-201ENST00000222275 LY75O60449 1722 aa18.3■□□□□ 0.52
UPK1A-201ENST00000222275 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
UPK1A-201ENST00000222275 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
UPK1A-201ENST00000222275 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
UPK1A-201ENST00000222275 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
UPK1A-201ENST00000222275 MYBBP1AQ9BQG0 1328 aaKnown RBP18.29■□□□□ 0.52
UPK1A-201ENST00000222275 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
UPK1A-201ENST00000222275 SLC4A9Q96Q91 983 aa18.28■□□□□ 0.52
UPK1A-201ENST00000222275 FHDC1Q9C0D6 1143 aaPredicted RBP18.28■□□□□ 0.52
UPK1A-201ENST00000222275 ITPK1Q13572 414 aa18.27■□□□□ 0.52
UPK1A-201ENST00000222275 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
UPK1A-201ENST00000222275 ITGB4P16144 1822 aa18.27■□□□□ 0.52
UPK1A-201ENST00000222275 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
UPK1A-201ENST00000222275 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
UPK1A-201ENST00000222275 DIAPH1O60610 1272 aaKnown RBP18.25■□□□□ 0.51
UPK1A-201ENST00000222275 ZNF530Q6P9A1 599 aaPredicted RBP18.25■□□□□ 0.51
UPK1A-201ENST00000222275 ARXQ96QS3 562 aa18.25■□□□□ 0.51
UPK1A-201ENST00000222275 TMOD3Q9NYL9 352 aa18.25■□□□□ 0.51
UPK1A-201ENST00000222275 KDRP35968 1356 aa18.25■□□□□ 0.51
UPK1A-201ENST00000222275 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
UPK1A-201ENST00000222275 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
UPK1A-201ENST00000222275 LOC102724428A0A0B4J2F2 783 aa18.24■□□□□ 0.51
UPK1A-201ENST00000222275 HMOX1P09601 288 aa18.24■□□□□ 0.51
UPK1A-201ENST00000222275 SIK1P57059 783 aa18.24■□□□□ 0.51
UPK1A-201ENST00000222275 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
UPK1A-201ENST00000222275 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
UPK1A-201ENST00000222275 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms