RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 G3BP1Q13283 466 aaKnown RBP eCLIP16.52■□□□□ 0.24
RAB3D-201ENST00000222120 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
RAB3D-201ENST00000222120 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
RAB3D-201ENST00000222120 CLASRPQ8N2M8 674 aaKnown RBP16.52■□□□□ 0.23
RAB3D-201ENST00000222120 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.23
RAB3D-201ENST00000222120 KIF1BO60333 1816 aa16.51■□□□□ 0.23
RAB3D-201ENST00000222120 MAP3K19Q56UN5 1328 aa16.51■□□□□ 0.23
RAB3D-201ENST00000222120 MAP3K4Q9Y6R4 1608 aa16.51■□□□□ 0.23
RAB3D-201ENST00000222120 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
RAB3D-201ENST00000222120 MYL6BP14649 208 aa16.51■□□□□ 0.23
RAB3D-201ENST00000222120 TTC5Q8N0Z6 440 aa16.51■□□□□ 0.23
RAB3D-201ENST00000222120 GRPEL1Q9HAV7 217 aa16.51■□□□□ 0.23
RAB3D-201ENST00000222120 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
RAB3D-201ENST00000222120 NASPP49321 788 aaPredicted RBP16.51■□□□□ 0.23
RAB3D-201ENST00000222120 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
RAB3D-201ENST00000222120 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
RAB3D-201ENST00000222120 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
RAB3D-201ENST00000222120 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 TTC22Q5TAA0 569 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 EYA1Q99502 592 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 HDAC5Q9UQL6 1122 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 PLEKHO1Q53GL0 409 aaPredicted RBP16.5■□□□□ 0.23
RAB3D-201ENST00000222120 SYAP1Q96A49 352 aaPredicted RBP16.5■□□□□ 0.23
RAB3D-201ENST00000222120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.5■□□□□ 0.23
RAB3D-201ENST00000222120 MX1P20591 662 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 PROSER2Q86WR7 435 aaPredicted RBP16.5■□□□□ 0.23
RAB3D-201ENST00000222120 MPNDQ8N594 471 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 ANKRD44Q8N8A2 993 aa16.5■□□□□ 0.23
RAB3D-201ENST00000222120 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
RAB3D-201ENST00000222120 MLH3Q9UHC1 1453 aa16.49■□□□□ 0.23
RAB3D-201ENST00000222120 PLEKHM2Q8IWE5 1019 aa16.49■□□□□ 0.23
RAB3D-201ENST00000222120 PHF8Q9UPP1 1060 aa16.49■□□□□ 0.23
RAB3D-201ENST00000222120 METP08581 1390 aa16.48■□□□□ 0.23
RAB3D-201ENST00000222120 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
RAB3D-201ENST00000222120 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
RAB3D-201ENST00000222120 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
RAB3D-201ENST00000222120 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
RAB3D-201ENST00000222120 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
RAB3D-201ENST00000222120 LTKP29376 864 aa16.47■□□□□ 0.23
RAB3D-201ENST00000222120 RUFY2Q8WXA3 655 aa16.47■□□□□ 0.23
RAB3D-201ENST00000222120 DCTPP1Q9H773 170 aa16.47■□□□□ 0.23
RAB3D-201ENST00000222120 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
RAB3D-201ENST00000222120 PTPRCP08575 1304 aa16.47■□□□□ 0.23
RAB3D-201ENST00000222120 ZFYVE9O95405 1425 aa16.47■□□□□ 0.23
RAB3D-201ENST00000222120 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
RAB3D-201ENST00000222120 CNTROBQ8N137 903 aa16.47■□□□□ 0.23
RAB3D-201ENST00000222120 SMC3Q9UQE7 1217 aa16.47■□□□□ 0.23
RAB3D-201ENST00000222120 FAM43AQ8N2R8 423 aa16.46■□□□□ 0.23
RAB3D-201ENST00000222120 FOSBP53539 338 aa16.46■□□□□ 0.23
RAB3D-201ENST00000222120 ABCA6Q8N139 1617 aa16.46■□□□□ 0.23
RAB3D-201ENST00000222120 DRC7Q8IY82 874 aa16.46■□□□□ 0.23
RAB3D-201ENST00000222120 SHROOM2Q13796 1616 aa16.46■□□□□ 0.22
RAB3D-201ENST00000222120 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
RAB3D-201ENST00000222120 USP19O94966 1318 aa16.45■□□□□ 0.22
RAB3D-201ENST00000222120 PI4KAP2A4QPH2 592 aa16.45■□□□□ 0.22
RAB3D-201ENST00000222120 HSP90AB4PQ58FF6 505 aa16.45■□□□□ 0.22
RAB3D-201ENST00000222120 PI4KAP1Q8N8J0 262 aa16.45■□□□□ 0.22
RAB3D-201ENST00000222120 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
RAB3D-201ENST00000222120 KCNA6P17658 529 aa16.45■□□□□ 0.22
RAB3D-201ENST00000222120 ABCC3O15438 1527 aa16.45■□□□□ 0.22
RAB3D-201ENST00000222120 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
RAB3D-201ENST00000222120 LRRC59Q96AG4 307 aaKnown RBP16.44■□□□□ 0.22
RAB3D-201ENST00000222120 XRCC6P12956 609 aaKnown RBP eCLIP16.44■□□□□ 0.22
RAB3D-201ENST00000222120 NEO1Q92859 1461 aa16.44■□□□□ 0.22
RAB3D-201ENST00000222120 PDE1AP54750 535 aa16.44■□□□□ 0.22
RAB3D-201ENST00000222120 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
RAB3D-201ENST00000222120 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
RAB3D-201ENST00000222120 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
RAB3D-201ENST00000222120 CHL1O00533 1208 aa16.43■□□□□ 0.22
RAB3D-201ENST00000222120 FIBPO43427 364 aa16.43■□□□□ 0.22
RAB3D-201ENST00000222120 ATF3P18847 181 aa16.43■□□□□ 0.22
RAB3D-201ENST00000222120 GDPD2Q9HCC8 539 aa16.43■□□□□ 0.22
RAB3D-201ENST00000222120 PHAXQ9H814 394 aaKnown RBP16.42■□□□□ 0.22
RAB3D-201ENST00000222120 MSH6P52701 1360 aa16.42■□□□□ 0.22
RAB3D-201ENST00000222120 AACSQ86V21 672 aa16.42■□□□□ 0.22
RAB3D-201ENST00000222120 JARID2Q92833 1246 aaPredicted RBP16.42■□□□□ 0.22
RAB3D-201ENST00000222120 SPG7Q9UQ90 795 aa16.42■□□□□ 0.22
RAB3D-201ENST00000222120 BAG4O95429 457 aaKnown RBP16.41■□□□□ 0.22
RAB3D-201ENST00000222120 ZGPATQ8N5A5 531 aaKnown RBP16.41■□□□□ 0.22
RAB3D-201ENST00000222120 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
RAB3D-201ENST00000222120 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
RAB3D-201ENST00000222120 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
RAB3D-201ENST00000222120 DNAAF4Q8WXU2 420 aa16.4■□□□□ 0.22
RAB3D-201ENST00000222120 DTNBO60941 627 aa16.4■□□□□ 0.22
RAB3D-201ENST00000222120 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
RAB3D-201ENST00000222120 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.22
RAB3D-201ENST00000222120 SIRT2Q8IXJ6 389 aa16.39■□□□□ 0.22
RAB3D-201ENST00000222120 CCDC8Q9H0W5 538 aaPredicted RBP16.39■□□□□ 0.21
RAB3D-201ENST00000222120 CEP152O94986 1710 aa16.39■□□□□ 0.21
RAB3D-201ENST00000222120 ARAP3Q8WWN8 1544 aa16.39■□□□□ 0.21
RAB3D-201ENST00000222120 HECW2Q9P2P5 1572 aa16.39■□□□□ 0.21
RAB3D-201ENST00000222120 GSPT1P15170 499 aaKnown RBP16.39■□□□□ 0.21
RAB3D-201ENST00000222120 STK3Q13188 491 aa16.39■□□□□ 0.21
RAB3D-201ENST00000222120 RBM25P49756 843 aaKnown RBP16.38■□□□□ 0.21
RAB3D-201ENST00000222120 KIF1BPQ96EK5 621 aa16.38■□□□□ 0.21
RAB3D-201ENST00000222120 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
RAB3D-201ENST00000222120 CLASP1Q7Z460 1538 aa16.38■□□□□ 0.21
RAB3D-201ENST00000222120 SYCE3A1L190 88 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms