RNA–Protein interactions for RNA: ENST00000220913.9

CHRAC1-201, Transcript of chromatin accessibility complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRAC1, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-201ENST00000220913 KIAA0232Q92628 1395 aa23.42■■□□□ 1.34
CHRAC1-201ENST00000220913 RTF1Q92541 710 aaKnown RBP23.41■■□□□ 1.34
CHRAC1-201ENST00000220913 LTN1O94822 1766 aa23.4■■□□□ 1.34
CHRAC1-201ENST00000220913 NWD1Q149M9 1564 aa23.4■■□□□ 1.34
CHRAC1-201ENST00000220913 HAP1P54257 671 aaPredicted RBP23.4■■□□□ 1.34
CHRAC1-201ENST00000220913 GAS2L2Q8NHY3 880 aa23.39■■□□□ 1.34
CHRAC1-201ENST00000220913 C1orf115Q9H7X2 142 aa23.39■■□□□ 1.34
CHRAC1-201ENST00000220913 DEKP35659 375 aaKnown RBP23.38■■□□□ 1.33
CHRAC1-201ENST00000220913 ESCO1Q5FWF5 840 aa23.38■■□□□ 1.33
CHRAC1-201ENST00000220913 SLC4A3P48751 1232 aa23.38■■□□□ 1.33
CHRAC1-201ENST00000220913 LTV1Q96GA3 475 aaPredicted RBP23.37■■□□□ 1.33
CHRAC1-201ENST00000220913 MIS18AQ9NYP9 233 aa23.37■■□□□ 1.33
CHRAC1-201ENST00000220913 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
CHRAC1-201ENST00000220913 DAXXQ9UER7 740 aaPredicted RBP23.36■■□□□ 1.33
CHRAC1-201ENST00000220913 TSPYL4Q9UJ04 414 aa23.36■■□□□ 1.33
CHRAC1-201ENST00000220913 LRRC37A3O60309 1634 aa23.35■■□□□ 1.33
CHRAC1-201ENST00000220913 NUCB1Q02818 461 aa23.35■■□□□ 1.33
CHRAC1-201ENST00000220913 NFAT5O94916 1531 aa23.34■■□□□ 1.33
CHRAC1-201ENST00000220913 PSME1Q06323 249 aa23.34■■□□□ 1.33
CHRAC1-201ENST00000220913 RGS12O14924 1447 aa23.34■■□□□ 1.33
CHRAC1-201ENST00000220913 LNPKQ9C0E8 428 aa23.32■■□□□ 1.32
CHRAC1-201ENST00000220913 CHD1LQ86WJ1 897 aa23.31■■□□□ 1.32
CHRAC1-201ENST00000220913 GNAT3A8MTJ3 354 aa23.31■■□□□ 1.32
CHRAC1-201ENST00000220913 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
CHRAC1-201ENST00000220913 SIRT2Q8IXJ6 389 aa23.31■■□□□ 1.32
CHRAC1-201ENST00000220913 UPF2Q9HAU5 1272 aaKnown RBP23.31■■□□□ 1.32
CHRAC1-201ENST00000220913 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
CHRAC1-201ENST00000220913 USHBP1Q8N6Y0 703 aa23.3■■□□□ 1.32
CHRAC1-201ENST00000220913 GCC1Q96CN9 775 aa23.3■■□□□ 1.32
CHRAC1-201ENST00000220913 PTPRCP08575 1304 aa23.29■■□□□ 1.32
CHRAC1-201ENST00000220913 IP6K1Q92551 441 aa23.29■■□□□ 1.32
CHRAC1-201ENST00000220913 ORAI2Q96SN7 254 aa23.29■■□□□ 1.32
CHRAC1-201ENST00000220913 MAP3K5Q99683 1374 aa23.29■■□□□ 1.32
CHRAC1-201ENST00000220913 SLC4A2P04920 1241 aa23.27■■□□□ 1.32
CHRAC1-201ENST00000220913 MSH6P52701 1360 aa23.27■■□□□ 1.32
CHRAC1-201ENST00000220913 RTL5Q5HYW3 569 aaPredicted RBP23.27■■□□□ 1.32
CHRAC1-201ENST00000220913 ANKRD45Q5TZF3 282 aa23.27■■□□□ 1.32
CHRAC1-201ENST00000220913 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
CHRAC1-201ENST00000220913 KCNH5Q8NCM2 988 aa23.26■■□□□ 1.31
CHRAC1-201ENST00000220913 TBC1D32Q96NH3 1257 aa23.26■■□□□ 1.31
CHRAC1-201ENST00000220913 XPCQ01831 940 aaPredicted RBP23.26■■□□□ 1.31
CHRAC1-201ENST00000220913 PHRF1Q9P1Y6 1649 aaKnown RBP23.25■■□□□ 1.31
CHRAC1-201ENST00000220913 IL17REQ8NFR9 667 aa23.24■■□□□ 1.31
CHRAC1-201ENST00000220913 RGPD2P0DJD1 1756 aa23.23■■□□□ 1.31
CHRAC1-201ENST00000220913 NBPF6Q5VWK0 638 aa23.23■■□□□ 1.31
CHRAC1-201ENST00000220913 PROSER2Q86WR7 435 aaPredicted RBP23.23■■□□□ 1.31
CHRAC1-201ENST00000220913 NBPF4Q96M43 638 aa23.23■■□□□ 1.31
CHRAC1-201ENST00000220913 FAM208AQ9UK61 1670 aaKnown RBP23.23■■□□□ 1.31
CHRAC1-201ENST00000220913 G2E3Q7L622 706 aa23.22■■□□□ 1.31
CHRAC1-201ENST00000220913 ATP10DQ9P241 1426 aa23.22■■□□□ 1.31
CHRAC1-201ENST00000220913 SLIT3O75094 1523 aa23.21■■□□□ 1.31
CHRAC1-201ENST00000220913 PLEKHG5O94827 1062 aa23.2■■□□□ 1.3
CHRAC1-201ENST00000220913 MFAP1P55081 439 aaKnown RBP23.2■■□□□ 1.3
CHRAC1-201ENST00000220913 TRPM3Q9HCF6 1732 aaPredicted RBP23.2■■□□□ 1.3
CHRAC1-201ENST00000220913 STK31Q9BXU1 1019 aa23.19■■□□□ 1.3
CHRAC1-201ENST00000220913 GCP02774 474 aa23.19■■□□□ 1.3
CHRAC1-201ENST00000220913 TAF7Q15545 349 aaPredicted RBP23.19■■□□□ 1.3
CHRAC1-201ENST00000220913 LMOD2Q6P5Q4 547 aa23.19■■□□□ 1.3
CHRAC1-201ENST00000220913 MEIS3Q99687 375 aa23.19■■□□□ 1.3
CHRAC1-201ENST00000220913 ANKRD44Q8N8A2 993 aa23.18■■□□□ 1.3
CHRAC1-201ENST00000220913 KIF1AQ12756 1690 aa23.18■■□□□ 1.3
CHRAC1-201ENST00000220913 F6X3S4 739 aa23.18■■□□□ 1.3
CHRAC1-201ENST00000220913 BECN1Q14457 450 aa23.18■■□□□ 1.3
CHRAC1-201ENST00000220913 LRRC59Q96AG4 307 aaKnown RBP23.18■■□□□ 1.3
CHRAC1-201ENST00000220913 C1orf167Q5SNV9 1468 aa23.17■■□□□ 1.3
CHRAC1-201ENST00000220913 BMP2KLQ5H9B9 411 aa23.17■■□□□ 1.3
CHRAC1-201ENST00000220913 CEP85Q6P2H3 762 aa23.17■■□□□ 1.3
CHRAC1-201ENST00000220913 SLC4A10Q6U841 1118 aa23.17■■□□□ 1.3
CHRAC1-201ENST00000220913 BABAM1Q9NWV8 329 aa23.17■■□□□ 1.3
CHRAC1-201ENST00000220913 CCDC30Q5VVM6 783 aa23.16■■□□□ 1.3
CHRAC1-201ENST00000220913 ARHGEF25Q86VW2 580 aa23.16■■□□□ 1.3
CHRAC1-201ENST00000220913 DCTPP1Q9H773 170 aa23.16■■□□□ 1.3
CHRAC1-201ENST00000220913 RPAP2Q8IXW5 612 aaPredicted RBP23.16■■□□□ 1.3
CHRAC1-201ENST00000220913 C22orf23Q9BZE7 217 aa23.16■■□□□ 1.3
CHRAC1-201ENST00000220913 NECTIN2Q92692 538 aa23.15■■□□□ 1.3
CHRAC1-201ENST00000220913 USP35Q9P2H5 1018 aa23.15■■□□□ 1.3
CHRAC1-201ENST00000220913 CEMIPQ8WUJ3 1361 aa23.15■■□□□ 1.3
CHRAC1-201ENST00000220913 CACNA1FO60840 1977 aa23.15■■□□□ 1.3
CHRAC1-201ENST00000220913 KRT28Q7Z3Y7 464 aa23.15■■□□□ 1.3
CHRAC1-201ENST00000220913 C19orf44Q9H6X5 657 aa23.15■■□□□ 1.3
CHRAC1-201ENST00000220913 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.29
CHRAC1-201ENST00000220913 CCT4P50991 539 aaKnown RBP23.14■■□□□ 1.29
CHRAC1-201ENST00000220913 FLIIQ13045 1269 aa23.13■■□□□ 1.29
CHRAC1-201ENST00000220913 SOS1Q07889 1333 aaPredicted RBP23.13■■□□□ 1.29
CHRAC1-201ENST00000220913 LMO7Q8WWI1 1683 aa23.12■■□□□ 1.29
CHRAC1-201ENST00000220913 FKBP5Q13451 457 aaPredicted RBP23.11■■□□□ 1.29
CHRAC1-201ENST00000220913 LGR6Q9HBX8 967 aa23.11■■□□□ 1.29
CHRAC1-201ENST00000220913 ANKRD24Q8TF21 1146 aa23.1■■□□□ 1.29
CHRAC1-201ENST00000220913 NCAPD2Q15021 1401 aa23.1■■□□□ 1.29
CHRAC1-201ENST00000220913 NFKBIBQ15653 356 aa23.09■■□□□ 1.29
CHRAC1-201ENST00000220913 ZNF530Q6P9A1 599 aaPredicted RBP23.09■■□□□ 1.29
CHRAC1-201ENST00000220913 STRCP1A6NGW2 1772 aa23.09■■□□□ 1.29
CHRAC1-201ENST00000220913 KDM3BQ7LBC6 1761 aa23.09■■□□□ 1.29
CHRAC1-201ENST00000220913 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
CHRAC1-201ENST00000220913 ALS2Q96Q42 1657 aa23.09■■□□□ 1.29
CHRAC1-201ENST00000220913 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
CHRAC1-201ENST00000220913 PLEKHO1Q53GL0 409 aaPredicted RBP23.08■■□□□ 1.29
CHRAC1-201ENST00000220913 AKAP4Q5JQC9 854 aa23.08■■□□□ 1.29
CHRAC1-201ENST00000220913 TMEM94Q12767 1356 aa23.08■■□□□ 1.28
CHRAC1-201ENST00000220913 CAMTA1Q9Y6Y1 1673 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms