RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
NDFIP2-201ENST00000218652 SEPT7Q16181 437 aaKnown RBP17.6■□□□□ 0.41
NDFIP2-201ENST00000218652 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
NDFIP2-201ENST00000218652 SFPQP23246 707 aaKnown RBP eCLIP17.6■□□□□ 0.41
NDFIP2-201ENST00000218652 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 EIF5P55010 431 aaKnown RBP17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 UBAC1Q9BSL1 405 aa17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 NOL7Q9UMY1 257 aaKnown RBP17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 TDO2P48775 406 aa17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 PRDM10Q9NQV6 1147 aa17.59■□□□□ 0.41
NDFIP2-201ENST00000218652 KRT32Q14532 448 aa17.58■□□□□ 0.41
NDFIP2-201ENST00000218652 PTPN14Q15678 1187 aa17.58■□□□□ 0.41
NDFIP2-201ENST00000218652 GOLGA6L7A0A1B0GV03 622 aa17.58■□□□□ 0.4
NDFIP2-201ENST00000218652 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.4
NDFIP2-201ENST00000218652 IDH1O75874 414 aaKnown RBP17.58■□□□□ 0.4
NDFIP2-201ENST00000218652 TMPOP42166 694 aaKnown RBP17.58■□□□□ 0.4
NDFIP2-201ENST00000218652 CABP4P57796 275 aa17.58■□□□□ 0.4
NDFIP2-201ENST00000218652 CBX1P83916 185 aa17.58■□□□□ 0.4
NDFIP2-201ENST00000218652 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.4
NDFIP2-201ENST00000218652 SEPT11Q9NVA2 429 aaKnown RBP17.58■□□□□ 0.4
NDFIP2-201ENST00000218652 CDKL5O76039 1030 aa17.57■□□□□ 0.4
NDFIP2-201ENST00000218652 MEX3CQ5U5Q3 659 aaKnown RBP17.57■□□□□ 0.4
NDFIP2-201ENST00000218652 TMCO3Q6UWJ1 677 aa17.57■□□□□ 0.4
NDFIP2-201ENST00000218652 BMP2KQ9NSY1 1161 aaPredicted RBP17.57■□□□□ 0.4
NDFIP2-201ENST00000218652 SSH1Q8WYL5 1049 aa17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 URI1O94763 535 aaPredicted RBP17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 KLHL10Q6JEL2 608 aa17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 SMTNL1A8MU46 457 aa17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 USP25Q9UHP3 1055 aa17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 KIAA1328Q86T90 577 aa17.56■□□□□ 0.4
NDFIP2-201ENST00000218652 NCOA2Q15596 1464 aa17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 SSFA2P28290 1259 aa17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 GDPD2Q9HCC8 539 aa17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 FCHSD2O94868 740 aa17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 PROSER2Q86WR7 435 aaPredicted RBP17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 CRACR2AQ9BSW2 395 aa17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 TBC1D2Q9BYX2 928 aa17.55■□□□□ 0.4
NDFIP2-201ENST00000218652 KRI1Q8N9T8 703 aaKnown RBP17.54■□□□□ 0.4
NDFIP2-201ENST00000218652 CKAP2LQ8IYA6 745 aa17.54■□□□□ 0.4
NDFIP2-201ENST00000218652 ABCF2Q9UG63 623 aa17.54■□□□□ 0.4
NDFIP2-201ENST00000218652 CCDC82Q8N4S0 544 aa17.54■□□□□ 0.4
NDFIP2-201ENST00000218652 KIF18AQ8NI77 898 aa17.54■□□□□ 0.4
NDFIP2-201ENST00000218652 ZRSR2Q15696 482 aaKnown RBP17.54■□□□□ 0.4
NDFIP2-201ENST00000218652 MX1P20591 662 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 GUCY1B3Q02153 619 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 ZSCAN25Q6NSZ9 544 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 LARP6Q9BRS8 491 aaKnown RBP17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 LRP2BPQ9P2M1 347 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 RRBP1Q9P2E9 1410 aaKnown RBP17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 SLC26A8Q96RN1 970 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 TRMT1Q9NXH9 659 aaKnown RBP17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 TRERF1Q96PN7 1200 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 RAI14Q9P0K7 980 aa17.53■□□□□ 0.4
NDFIP2-201ENST00000218652 TXLNBQ8N3L3 684 aa17.52■□□□□ 0.4
NDFIP2-201ENST00000218652 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.4
NDFIP2-201ENST00000218652 NFE2L2Q16236 605 aa17.52■□□□□ 0.4
NDFIP2-201ENST00000218652 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.4
NDFIP2-201ENST00000218652 SCAND2PQ9GZW5 306 aaPredicted RBP17.52■□□□□ 0.4
NDFIP2-201ENST00000218652 FYCO1Q9BQS8 1478 aa17.52■□□□□ 0.4
NDFIP2-201ENST00000218652 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
NDFIP2-201ENST00000218652 KIF4BQ2VIQ3 1234 aa17.52■□□□□ 0.4
NDFIP2-201ENST00000218652 RAB11FIP3O75154 756 aa17.52■□□□□ 0.39
NDFIP2-201ENST00000218652 MCM10Q7L590 875 aa17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 TNPO1Q92973 898 aaKnown RBP17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 IBSPP21815 317 aaPredicted RBP17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 TAF4BQ92750 862 aa17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 C16orf45Q96MC5 204 aaPredicted RBP17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 BTBD11A6QL63 1104 aa17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 USP8P40818 1118 aa17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 DUSP27Q5VZP5 1158 aa17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
NDFIP2-201ENST00000218652 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 IMMTQ16891 758 aaKnown RBP17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 IQCEQ6IPM2 695 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 KIF21BO75037 1637 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 CFTRP13569 1480 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 USP5P45974 858 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 AIDAQ96BJ3 306 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 ANO10Q9NW15 660 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 HFM1A2PYH4 1435 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
NDFIP2-201ENST00000218652 CCDC183Q5T5S1 534 aa17.49■□□□□ 0.39
NDFIP2-201ENST00000218652 KIF2AO00139 706 aaPredicted RBP17.49■□□□□ 0.39
NDFIP2-201ENST00000218652 DNA2P51530 1060 aa17.49■□□□□ 0.39
NDFIP2-201ENST00000218652 F6X3S4 739 aa17.49■□□□□ 0.39
NDFIP2-201ENST00000218652 POLR3GO15318 223 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms