RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 DDB1Q16531 1140 aa26.87■■□□□ 1.89
RHBDD3-201ENST00000216085 OVOS2A0A0G2JMS6 1433 aa26.86■■□□□ 1.89
RHBDD3-201ENST00000216085 EXOC5O00471 708 aa26.86■■□□□ 1.89
RHBDD3-201ENST00000216085 FCHSD2O94868 740 aa26.86■■□□□ 1.89
RHBDD3-201ENST00000216085 RGS12O14924 1447 aa26.85■■□□□ 1.89
RHBDD3-201ENST00000216085 MIER1Q8N108 512 aa26.85■■□□□ 1.89
RHBDD3-201ENST00000216085 TNS2Q63HR2 1409 aa26.85■■□□□ 1.89
RHBDD3-201ENST00000216085 PDE3BQ13370 1112 aa26.84■■□□□ 1.89
RHBDD3-201ENST00000216085 SPG7Q9UQ90 795 aa26.84■■□□□ 1.89
RHBDD3-201ENST00000216085 LRRC37A3O60309 1634 aa26.83■■□□□ 1.89
RHBDD3-201ENST00000216085 CCDC184Q52MB2 194 aa26.83■■□□□ 1.89
RHBDD3-201ENST00000216085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.83■■□□□ 1.89
RHBDD3-201ENST00000216085 AMOTQ4VCS5 1084 aa26.82■■□□□ 1.88
RHBDD3-201ENST00000216085 ZCRB1Q8TBF4 217 aaKnown RBP26.82■■□□□ 1.88
RHBDD3-201ENST00000216085 RSPH6AQ9H0K4 717 aa26.82■■□□□ 1.88
RHBDD3-201ENST00000216085 PLEKHO1Q53GL0 409 aaPredicted RBP26.81■■□□□ 1.88
RHBDD3-201ENST00000216085 PRKAR2BP31323 418 aa26.81■■□□□ 1.88
RHBDD3-201ENST00000216085 PCDH11XQ9BZA7 1347 aa26.8■■□□□ 1.88
RHBDD3-201ENST00000216085 PCDH11YQ9BZA8 1340 aa26.8■■□□□ 1.88
RHBDD3-201ENST00000216085 MAPK8IP3Q9UPT6 1336 aa26.79■■□□□ 1.88
RHBDD3-201ENST00000216085 PNISRQ8TF01 805 aaKnown RBP26.79■■□□□ 1.88
RHBDD3-201ENST00000216085 PKD1L3Q7Z443 1732 aa26.78■■□□□ 1.88
RHBDD3-201ENST00000216085 KRT27Q7Z3Y8 459 aa26.78■■□□□ 1.88
RHBDD3-201ENST00000216085 ADAMTS8Q9UP79 889 aa26.77■■□□□ 1.88
RHBDD3-201ENST00000216085 GAS2L2Q8NHY3 880 aa26.74■■□□□ 1.87
RHBDD3-201ENST00000216085 C1orf141Q5JVX7 400 aa26.74■■□□□ 1.87
RHBDD3-201ENST00000216085 DDX54Q8TDD1 881 aaKnown RBP26.74■■□□□ 1.87
RHBDD3-201ENST00000216085 ZNF530Q6P9A1 599 aaPredicted RBP26.73■■□□□ 1.87
RHBDD3-201ENST00000216085 BRWD3Q6RI45 1802 aa26.72■■□□□ 1.87
RHBDD3-201ENST00000216085 IFNL2Q8IZJ0 200 aa26.72■■□□□ 1.87
RHBDD3-201ENST00000216085 FAM9BQ8IZU0 186 aa26.72■■□□□ 1.87
RHBDD3-201ENST00000216085 RUNDC1Q96C34 613 aa26.71■■□□□ 1.87
RHBDD3-201ENST00000216085 PLEKHF1Q96S99 279 aa26.7■■□□□ 1.86
RHBDD3-201ENST00000216085 HSP90AB1P08238 724 aaKnown RBP26.69■■□□□ 1.86
RHBDD3-201ENST00000216085 SHANK3Q9BYB0 1731 aa26.69■■□□□ 1.86
RHBDD3-201ENST00000216085 MTHFSDQ2M296 383 aaKnown RBP26.69■■□□□ 1.86
RHBDD3-201ENST00000216085 MARCH10Q8NA82 808 aaPredicted RBP26.69■■□□□ 1.86
RHBDD3-201ENST00000216085 PHACTR3Q96KR7 559 aa26.69■■□□□ 1.86
RHBDD3-201ENST00000216085 CCDC146Q8IYE0 955 aa26.68■■□□□ 1.86
RHBDD3-201ENST00000216085 CYP27B1O15528 508 aa26.67■■□□□ 1.86
RHBDD3-201ENST00000216085 PHKG2P15735 406 aa26.67■■□□□ 1.86
RHBDD3-201ENST00000216085 AKAP4Q5JQC9 854 aa26.67■■□□□ 1.86
RHBDD3-201ENST00000216085 FAM196AQ6ZSG2 479 aa26.67■■□□□ 1.86
RHBDD3-201ENST00000216085 BCL9O00512 1426 aa26.64■■□□□ 1.86
RHBDD3-201ENST00000216085 MAP3K5Q99683 1374 aa26.64■■□□□ 1.85
RHBDD3-201ENST00000216085 NFE2L2Q16236 605 aa26.63■■□□□ 1.85
RHBDD3-201ENST00000216085 GNAT3A8MTJ3 354 aa26.62■■□□□ 1.85
RHBDD3-201ENST00000216085 DCAF5Q96JK2 942 aa26.62■■□□□ 1.85
RHBDD3-201ENST00000216085 NKX1-1Q15270 411 aaPredicted RBP26.61■■□□□ 1.85
RHBDD3-201ENST00000216085 FAM182BQ5T319 152 aa26.61■■□□□ 1.85
RHBDD3-201ENST00000216085 RTF1Q92541 710 aaKnown RBP26.61■■□□□ 1.85
RHBDD3-201ENST00000216085 LMOD3Q0VAK6 560 aa26.6■■□□□ 1.85
RHBDD3-201ENST00000216085 TMPOP42166 694 aaKnown RBP26.58■■□□□ 1.85
RHBDD3-201ENST00000216085 HTATSF1O43719 755 aaKnown RBP26.58■■□□□ 1.85
RHBDD3-201ENST00000216085 RIPK4P57078 832 aa26.57■■□□□ 1.84
RHBDD3-201ENST00000216085 APAF1O14727 1248 aa26.56■■□□□ 1.84
RHBDD3-201ENST00000216085 MPRIPQ6WCQ1 1025 aa26.56■■□□□ 1.84
RHBDD3-201ENST00000216085 EP400Q96L91 3159 aa26.55■■□□□ 1.84
RHBDD3-201ENST00000216085 NEUROD2Q15784 382 aa26.55■■□□□ 1.84
RHBDD3-201ENST00000216085 SYTL4Q96C24 671 aaPredicted RBP26.55■■□□□ 1.84
RHBDD3-201ENST00000216085 DOT1LQ8TEK3 1739 aa26.55■■□□□ 1.84
RHBDD3-201ENST00000216085 ERVV-2B6SEH9 535 aa26.54■■□□□ 1.84
RHBDD3-201ENST00000216085 ILDR2Q71H61 639 aa26.54■■□□□ 1.84
RHBDD3-201ENST00000216085 KDM6AO15550 1401 aaPredicted RBP26.54■■□□□ 1.84
RHBDD3-201ENST00000216085 ACSBG1Q96GR2 724 aa26.53■■□□□ 1.84
RHBDD3-201ENST00000216085 RRP7AQ9Y3A4 280 aaKnown RBP26.53■■□□□ 1.84
RHBDD3-201ENST00000216085 RNMTO43148 476 aaKnown RBP26.52■■□□□ 1.84
RHBDD3-201ENST00000216085 KAT6BQ8WYB5 2073 aa26.52■■□□□ 1.84
RHBDD3-201ENST00000216085 NHSQ6T4R5 1651 aa26.51■■□□□ 1.83
RHBDD3-201ENST00000216085 CABP4P57796 275 aa26.51■■□□□ 1.83
RHBDD3-201ENST00000216085 NGEFQ8N5V2 710 aa26.51■■□□□ 1.83
RHBDD3-201ENST00000216085 TMOD3Q9NYL9 352 aa26.51■■□□□ 1.83
RHBDD3-201ENST00000216085 SCN11AQ9UI33 1791 aa26.51■■□□□ 1.83
RHBDD3-201ENST00000216085 DLG5Q8TDM6 1919 aa26.51■■□□□ 1.83
RHBDD3-201ENST00000216085 TEFQ10587 303 aa26.51■■□□□ 1.83
RHBDD3-201ENST00000216085 TRIM37O94972 964 aa26.5■■□□□ 1.83
RHBDD3-201ENST00000216085 PRIM1P49642 420 aaKnown RBP26.5■■□□□ 1.83
RHBDD3-201ENST00000216085 BCL11BQ9C0K0 894 aaPredicted RBP26.5■■□□□ 1.83
RHBDD3-201ENST00000216085 TOGARAM1Q9Y4F4 1720 aa26.49■■□□□ 1.83
RHBDD3-201ENST00000216085 SBF2Q86WG5 1849 aa26.49■■□□□ 1.83
RHBDD3-201ENST00000216085 SF3B2Q13435 895 aaKnown RBP26.49■■□□□ 1.83
RHBDD3-201ENST00000216085 ADAMTS7Q9UKP4 1686 aa26.49■■□□□ 1.83
RHBDD3-201ENST00000216085 NCBP3Q53F19 620 aaKnown RBP26.48■■□□□ 1.83
RHBDD3-201ENST00000216085 LGR6Q9HBX8 967 aa26.48■■□□□ 1.83
RHBDD3-201ENST00000216085 MCM10Q7L590 875 aa26.48■■□□□ 1.83
RHBDD3-201ENST00000216085 CEMIPQ8WUJ3 1361 aa26.48■■□□□ 1.83
RHBDD3-201ENST00000216085 CCDC125Q86Z20 511 aa26.47■■□□□ 1.83
RHBDD3-201ENST00000216085 IL17REQ8NFR9 667 aa26.47■■□□□ 1.83
RHBDD3-201ENST00000216085 SLC52A2Q9HAB3 445 aa26.47■■□□□ 1.83
RHBDD3-201ENST00000216085 MRC1P22897 1456 aa26.46■■□□□ 1.83
RHBDD3-201ENST00000216085 VIRMAQ69YN4 1812 aaKnown RBP26.46■■□□□ 1.83
RHBDD3-201ENST00000216085 CALD1Q05682 793 aaKnown RBP26.46■■□□□ 1.83
RHBDD3-201ENST00000216085 KCNQ2O43526 872 aa26.45■■□□□ 1.82
RHBDD3-201ENST00000216085 DCTN1Q14203 1278 aa26.45■■□□□ 1.82
RHBDD3-201ENST00000216085 CCDC27Q2M243 656 aa26.45■■□□□ 1.82
RHBDD3-201ENST00000216085 ITGB4P16144 1822 aa26.44■■□□□ 1.82
RHBDD3-201ENST00000216085 NFATC2IPQ8NCF5 419 aa26.43■■□□□ 1.82
RHBDD3-201ENST00000216085 TRIM35Q9UPQ4 493 aa26.43■■□□□ 1.82
RHBDD3-201ENST00000216085 PIGBQ92521 554 aa26.41■■□□□ 1.82
RHBDD3-201ENST00000216085 APBA3O96018 575 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms