RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 RGPD8O14715 1765 aaPredicted RBP12.75□□□□□ -0.37
CHERP-201ENST00000198939 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
CHERP-201ENST00000198939 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
CHERP-201ENST00000198939 AKAP12Q02952 1782 aa12.75□□□□□ -0.37
CHERP-201ENST00000198939 OFD1O75665 1012 aa12.75□□□□□ -0.37
CHERP-201ENST00000198939 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
CHERP-201ENST00000198939 GAS2L3Q86XJ1 694 aa12.74□□□□□ -0.37
CHERP-201ENST00000198939 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
CHERP-201ENST00000198939 ZNF521Q96K83 1311 aa12.74□□□□□ -0.37
CHERP-201ENST00000198939 NME9Q86XW9 330 aa12.74□□□□□ -0.37
CHERP-201ENST00000198939 TNPO1Q92973 898 aaKnown RBP12.74□□□□□ -0.37
CHERP-201ENST00000198939 PXDNQ92626 1479 aa12.74□□□□□ -0.37
CHERP-201ENST00000198939 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
CHERP-201ENST00000198939 DDX49Q9Y6V7 483 aaKnown RBP12.73□□□□□ -0.37
CHERP-201ENST00000198939 BCL2L13Q9BXK5 485 aa12.73□□□□□ -0.37
CHERP-201ENST00000198939 AAMPQ13685 434 aa12.73□□□□□ -0.37
CHERP-201ENST00000198939 FTSJ3Q8IY81 847 aaKnown RBP12.72□□□□□ -0.37
CHERP-201ENST00000198939 DDX17Q92841 729 aaKnown RBP12.72□□□□□ -0.37
CHERP-201ENST00000198939 CFAP53Q96M91 514 aa12.72□□□□□ -0.37
CHERP-201ENST00000198939 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
CHERP-201ENST00000198939 JCADQ9P266 1359 aa12.72□□□□□ -0.37
CHERP-201ENST00000198939 NHSL1Q5SYE7 1610 aa12.72□□□□□ -0.37
CHERP-201ENST00000198939 UQCRHLA0A096LP55 91 aa12.72□□□□□ -0.37
CHERP-201ENST00000198939 UQCRHP07919 91 aa12.72□□□□□ -0.37
CHERP-201ENST00000198939 PLCB2Q00722 1185 aa12.71□□□□□ -0.37
CHERP-201ENST00000198939 MTERF4Q7Z6M4 381 aaKnown RBP12.71□□□□□ -0.37
CHERP-201ENST00000198939 PDE4CQ08493 712 aa12.7□□□□□ -0.38
CHERP-201ENST00000198939 TRMT2AQ8IZ69 625 aaKnown RBP12.7□□□□□ -0.38
CHERP-201ENST00000198939 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
CHERP-201ENST00000198939 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
CHERP-201ENST00000198939 NUTM2GQ5VZR2 741 aa12.69□□□□□ -0.38
CHERP-201ENST00000198939 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
CHERP-201ENST00000198939 SPATA31A6Q5VVP1 1343 aa12.69□□□□□ -0.38
CHERP-201ENST00000198939 GCP02774 474 aa12.69□□□□□ -0.38
CHERP-201ENST00000198939 PRDM10Q9NQV6 1147 aa12.69□□□□□ -0.38
CHERP-201ENST00000198939 PRDM4Q9UKN5 801 aa12.69□□□□□ -0.38
CHERP-201ENST00000198939 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 TERF1P54274 439 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 ZHX1Q9UKY1 873 aaPredicted RBP12.68□□□□□ -0.38
CHERP-201ENST00000198939 RIPK4P57078 832 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 HSPA1LP34931 641 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 AMPHP49418 695 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
CHERP-201ENST00000198939 PNPLA6Q8IY17 1366 aa12.67□□□□□ -0.38
CHERP-201ENST00000198939 CSPP1Q1MSJ5 1256 aa12.67□□□□□ -0.38
CHERP-201ENST00000198939 PPP1R9BQ96SB3 815 aa12.67□□□□□ -0.38
CHERP-201ENST00000198939 SMAP1Q8IYB5 467 aaPredicted RBP12.67□□□□□ -0.38
CHERP-201ENST00000198939 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
CHERP-201ENST00000198939 KIF20BQ96Q89 1820 aa12.67□□□□□ -0.38
CHERP-201ENST00000198939 TRPM3Q9HCF6 1732 aaPredicted RBP12.66□□□□□ -0.38
CHERP-201ENST00000198939 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
CHERP-201ENST00000198939 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
CHERP-201ENST00000198939 SOX12O15370 315 aa12.65□□□□□ -0.38
CHERP-201ENST00000198939 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
CHERP-201ENST00000198939 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
CHERP-201ENST00000198939 RLBP1P12271 317 aa12.64□□□□□ -0.39
CHERP-201ENST00000198939 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
CHERP-201ENST00000198939 PRDM11Q9NQV5 511 aa12.64□□□□□ -0.39
CHERP-201ENST00000198939 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
CHERP-201ENST00000198939 RTL1A6NKG5 1358 aa12.64□□□□□ -0.39
CHERP-201ENST00000198939 COL16A1Q07092 1604 aaPredicted RBP12.64□□□□□ -0.39
CHERP-201ENST00000198939 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
CHERP-201ENST00000198939 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
CHERP-201ENST00000198939 MEX3CQ5U5Q3 659 aaKnown RBP12.64□□□□□ -0.39
CHERP-201ENST00000198939 DYNC1I1O14576 645 aa12.63□□□□□ -0.39
CHERP-201ENST00000198939 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
CHERP-201ENST00000198939 CPDO75976 1380 aa12.63□□□□□ -0.39
CHERP-201ENST00000198939 CAVIN1Q6NZI2 390 aaKnown RBP12.63□□□□□ -0.39
CHERP-201ENST00000198939 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
CHERP-201ENST00000198939 SLIT3O75094 1523 aa12.63□□□□□ -0.39
CHERP-201ENST00000198939 ANKRD26Q9UPS8 1709 aa12.63□□□□□ -0.39
CHERP-201ENST00000198939 USP54Q70EL1 1684 aa12.63□□□□□ -0.39
CHERP-201ENST00000198939 MTHFSP49914 203 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 ARHGEF25Q86VW2 580 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
CHERP-201ENST00000198939 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
CHERP-201ENST00000198939 ZKSCAN2Q63HK3 967 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
CHERP-201ENST00000198939 ITPRIPQ8IWB1 547 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 IP6K1Q92551 441 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 FLT4P35916 1363 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 SSFA2P28290 1259 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
CHERP-201ENST00000198939 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 SNX21Q969T3 373 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 POLKQ9UBT6 870 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 MCTP1Q6DN14 999 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
CHERP-201ENST00000198939 CABLES1Q8TDN4 633 aa12.62□□□□□ -0.39
CHERP-201ENST00000198939 MVPQ14764 893 aaKnown RBP12.61□□□□□ -0.39
CHERP-201ENST00000198939 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
CHERP-201ENST00000198939 NOL7Q9UMY1 257 aaKnown RBP12.61□□□□□ -0.39
CHERP-201ENST00000198939 EVA1CP58658 441 aa12.61□□□□□ -0.39
CHERP-201ENST00000198939 COL22A1Q8NFW1 1626 aaPredicted RBP12.61□□□□□ -0.39
CHERP-201ENST00000198939 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
CHERP-201ENST00000198939 DIAPH1O60610 1272 aaKnown RBP12.6□□□□□ -0.39
CHERP-201ENST00000198939 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms