RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 MIS18AQ9NYP9 233 aa21.08■□□□□ 0.97
CDK13-201ENST00000181839 ZNF652Q9Y2D9 606 aa21.08■□□□□ 0.97
CDK13-201ENST00000181839 EIF5P55010 431 aaKnown RBP21.08■□□□□ 0.97
CDK13-201ENST00000181839 TWISTNBQ3B726 338 aaPredicted RBP21.08■□□□□ 0.97
CDK13-201ENST00000181839 TMOD3Q9NYL9 352 aa21.08■□□□□ 0.97
CDK13-201ENST00000181839 SAMM50Q9Y512 469 aa21.08■□□□□ 0.97
CDK13-201ENST00000181839 SERPINA10Q9UK55 444 aa21.08■□□□□ 0.96
CDK13-201ENST00000181839 JAKMIP3Q5VZ66 844 aa21.07■□□□□ 0.96
CDK13-201ENST00000181839 NASPP49321 788 aaPredicted RBP21.07■□□□□ 0.96
CDK13-201ENST00000181839 CUL5Q93034 780 aa21.07■□□□□ 0.96
CDK13-201ENST00000181839 TSR2Q969E8 191 aaKnown RBP21.07■□□□□ 0.96
CDK13-201ENST00000181839 TSPY26PQ9H489 355 aa21.07■□□□□ 0.96
CDK13-201ENST00000181839 VAT1LQ9HCJ6 419 aa21.07■□□□□ 0.96
CDK13-201ENST00000181839 CYP46A1Q9Y6A2 500 aa21.07■□□□□ 0.96
CDK13-201ENST00000181839 PIP4K2AP48426 406 aaPredicted RBP21.07■□□□□ 0.96
CDK13-201ENST00000181839 BIN2Q9UBW5 565 aaPredicted RBP21.07■□□□□ 0.96
CDK13-201ENST00000181839 VPS8Q8N3P4 1428 aa21.06■□□□□ 0.96
CDK13-201ENST00000181839 MMRN2Q9H8L6 949 aa21.06■□□□□ 0.96
CDK13-201ENST00000181839 SPTY2D1Q68D10 685 aaPredicted RBP21.06■□□□□ 0.96
CDK13-201ENST00000181839 LEKR1Q6ZMV7 388 aa21.06■□□□□ 0.96
CDK13-201ENST00000181839 TNMDQ9H2S6 317 aa21.06■□□□□ 0.96
CDK13-201ENST00000181839 PABPN1LA6NDY0 278 aaKnown RBP21.06■□□□□ 0.96
CDK13-201ENST00000181839 ANKLE2Q86XL3 938 aa21.06■□□□□ 0.96
CDK13-201ENST00000181839 DDX11Q96FC9 970 aa21.06■□□□□ 0.96
CDK13-201ENST00000181839 UBE4AQ14139 1066 aa21.06■□□□□ 0.96
CDK13-201ENST00000181839 DACH1Q9UI36 760 aa21.05■□□□□ 0.96
CDK13-201ENST00000181839 JMYQ8N9B5 988 aa21.05■□□□□ 0.96
CDK13-201ENST00000181839 ARL1P40616 181 aaPredicted RBP21.04■□□□□ 0.96
CDK13-201ENST00000181839 TMX1Q9H3N1 280 aa21.04■□□□□ 0.96
CDK13-201ENST00000181839 THEMISQ8N1K5 641 aaPredicted RBP21.04■□□□□ 0.96
CDK13-201ENST00000181839 CCDC39Q9UFE4 941 aa21.04■□□□□ 0.96
CDK13-201ENST00000181839 RANBP6O60518 1105 aaKnown RBP21.04■□□□□ 0.96
CDK13-201ENST00000181839 EPB41L2O43491 1005 aaKnown RBP21.04■□□□□ 0.96
CDK13-201ENST00000181839 USHBP1Q8N6Y0 703 aa21.04■□□□□ 0.96
CDK13-201ENST00000181839 LRRCC1Q9C099 1032 aa21.03■□□□□ 0.96
CDK13-201ENST00000181839 ZNF444Q8N0Y2 327 aaPredicted RBP21.03■□□□□ 0.96
CDK13-201ENST00000181839 CCDC91Q7Z6B0 441 aa21.03■□□□□ 0.96
CDK13-201ENST00000181839 CEP126Q9P2H0 1117 aa21.03■□□□□ 0.96
CDK13-201ENST00000181839 CTNNA2P26232 953 aa21.03■□□□□ 0.96
CDK13-201ENST00000181839 CCDC178Q5BJE1 867 aa21.03■□□□□ 0.96
CDK13-201ENST00000181839 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.03■□□□□ 0.96
CDK13-201ENST00000181839 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.03■□□□□ 0.96
CDK13-201ENST00000181839 PLS1Q14651 629 aa21.03■□□□□ 0.96
CDK13-201ENST00000181839 CWC15Q9P013 229 aaKnown RBP21.03■□□□□ 0.96
CDK13-201ENST00000181839 FAM43AQ8N2R8 423 aa21.02■□□□□ 0.96
CDK13-201ENST00000181839 BCCIPQ9P287 314 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDK13-201ENST00000181839 KIAA0754O94854 1291 aa21.02■□□□□ 0.96
CDK13-201ENST00000181839 CBX1P83916 185 aa21.02■□□□□ 0.96
CDK13-201ENST00000181839 KLHL10Q6JEL2 608 aa21.02■□□□□ 0.96
CDK13-201ENST00000181839 PPP1R12BO60237 982 aaPredicted RBP21.02■□□□□ 0.96
CDK13-201ENST00000181839 EXOSC9Q06265 439 aaKnown RBP21.02■□□□□ 0.96
CDK13-201ENST00000181839 DYDC1Q8WWB3 177 aa21.02■□□□□ 0.96
CDK13-201ENST00000181839 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.95
CDK13-201ENST00000181839 USP8P40818 1118 aa21.02■□□□□ 0.95
CDK13-201ENST00000181839 IL1RAPL2Q9NP60 686 aa21.01■□□□□ 0.95
CDK13-201ENST00000181839 TSHZ2Q9NRE2 1034 aa21.01■□□□□ 0.95
CDK13-201ENST00000181839 TAF4BQ92750 862 aa21.01■□□□□ 0.95
CDK13-201ENST00000181839 CABP1Q9NZU7 370 aa21■□□□□ 0.95
CDK13-201ENST00000181839 CNTLNQ9NXG0 1405 aa21■□□□□ 0.95
CDK13-201ENST00000181839 GPTP24298 496 aa21■□□□□ 0.95
CDK13-201ENST00000181839 RBM26Q5T8P6 1007 aaKnown RBP21■□□□□ 0.95
CDK13-201ENST00000181839 F8W031 263 aaPredicted RBP21■□□□□ 0.95
CDK13-201ENST00000181839 CKAP2LQ8IYA6 745 aa21■□□□□ 0.95
CDK13-201ENST00000181839 KIF20AO95235 890 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 RSPH6AQ9H0K4 717 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 GSTTP1A0A1W2PQM5 241 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 SRGAP3O43295 1099 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 LMAN1P49257 510 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 RFX1P22670 979 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 LARP1BQ659C4 914 aaKnown RBP20.99■□□□□ 0.95
CDK13-201ENST00000181839 LETM1O95202 739 aaPredicted RBP20.99■□□□□ 0.95
CDK13-201ENST00000181839 DPH6Q7L8W6 267 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 RGS22Q8NE09 1264 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 CEP63Q96MT8 703 aa20.99■□□□□ 0.95
CDK13-201ENST00000181839 JAKMIP1Q96N16 626 aaKnown RBP20.99■□□□□ 0.95
CDK13-201ENST00000181839 CCDC144CPQ8IYA2 1237 aa20.98■□□□□ 0.95
CDK13-201ENST00000181839 MYD88Q99836 296 aa20.98■□□□□ 0.95
CDK13-201ENST00000181839 RAPGEF2Q9Y4G8 1499 aa20.98■□□□□ 0.95
CDK13-201ENST00000181839 BICD1Q96G01 975 aa20.98■□□□□ 0.95
CDK13-201ENST00000181839 SSX2IPQ9Y2D8 614 aa20.98■□□□□ 0.95
CDK13-201ENST00000181839 MAP2K1Q02750 393 aaPredicted RBP20.98■□□□□ 0.95
CDK13-201ENST00000181839 SMC1AQ14683 1233 aaKnown RBP20.98■□□□□ 0.95
CDK13-201ENST00000181839 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
CDK13-201ENST00000181839 GUCY1B3Q02153 619 aa20.98■□□□□ 0.95
CDK13-201ENST00000181839 NUTM1Q86Y26 1132 aa20.98■□□□□ 0.95
CDK13-201ENST00000181839 ZNF397Q8NF99 534 aaPredicted RBP20.98■□□□□ 0.95
CDK13-201ENST00000181839 STAMBPO95630 424 aa20.97■□□□□ 0.95
CDK13-201ENST00000181839 CCP110O43303 1012 aa20.97■□□□□ 0.95
CDK13-201ENST00000181839 PDCP20941 246 aa20.97■□□□□ 0.95
CDK13-201ENST00000181839 RBM10P98175 930 aaKnown RBP20.97■□□□□ 0.95
CDK13-201ENST00000181839 LRSAM1Q6UWE0 723 aa20.97■□□□□ 0.95
CDK13-201ENST00000181839 KIF7Q2M1P5 1343 aa20.97■□□□□ 0.95
CDK13-201ENST00000181839 TERF1P54274 439 aa20.97■□□□□ 0.95
CDK13-201ENST00000181839 ZNF287Q9HBT7 754 aa20.97■□□□□ 0.95
CDK13-201ENST00000181839 CETN2P41208 172 aa20.96■□□□□ 0.95
CDK13-201ENST00000181839 RABEP1Q15276 862 aa20.96■□□□□ 0.95
CDK13-201ENST00000181839 ZNF644Q9H582 1327 aaPredicted RBP20.96■□□□□ 0.95
CDK13-201ENST00000181839 GOLGA6L7A0A1B0GV03 622 aa20.96■□□□□ 0.95
CDK13-201ENST00000181839 CDKL5O76039 1030 aa20.96■□□□□ 0.95
CDK13-201ENST00000181839 DDX23Q9BUQ8 820 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms