RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 CFAP44Q96MT7 982 aa14.4□□□□□ -0.1
GPATCH1-201ENST00000170564 LRRC37A3O60309 1634 aa14.4□□□□□ -0.1
GPATCH1-201ENST00000170564 VAMP4O75379 141 aa14.4□□□□□ -0.1
GPATCH1-201ENST00000170564 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
GPATCH1-201ENST00000170564 USHBP1Q8N6Y0 703 aa14.39□□□□□ -0.11
GPATCH1-201ENST00000170564 SMC4Q9NTJ3 1288 aa14.39□□□□□ -0.11
GPATCH1-201ENST00000170564 DCCP43146 1447 aa14.39□□□□□ -0.11
GPATCH1-201ENST00000170564 RTL1A6NKG5 1358 aa14.39□□□□□ -0.11
GPATCH1-201ENST00000170564 LTV1Q96GA3 475 aaPredicted RBP14.39□□□□□ -0.11
GPATCH1-201ENST00000170564 USP19O94966 1318 aa14.39□□□□□ -0.11
GPATCH1-201ENST00000170564 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
GPATCH1-201ENST00000170564 NOB1Q9ULX3 412 aaKnown RBP14.38□□□□□ -0.11
GPATCH1-201ENST00000170564 ELL2O00472 640 aaPredicted RBP14.38□□□□□ -0.11
GPATCH1-201ENST00000170564 GCP02774 474 aa14.38□□□□□ -0.11
GPATCH1-201ENST00000170564 KRT28Q7Z3Y7 464 aa14.38□□□□□ -0.11
GPATCH1-201ENST00000170564 IP6K1Q92551 441 aa14.38□□□□□ -0.11
GPATCH1-201ENST00000170564 CRYBG1Q9Y4K1 1723 aa14.38□□□□□ -0.11
GPATCH1-201ENST00000170564 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
GPATCH1-201ENST00000170564 MSH6P52701 1360 aa14.37□□□□□ -0.11
GPATCH1-201ENST00000170564 GNAI1P63096 354 aa14.37□□□□□ -0.11
GPATCH1-201ENST00000170564 NBPF6Q5VWK0 638 aa14.37□□□□□ -0.11
GPATCH1-201ENST00000170564 NBPF4Q96M43 638 aa14.37□□□□□ -0.11
GPATCH1-201ENST00000170564 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
GPATCH1-201ENST00000170564 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
GPATCH1-201ENST00000170564 NCOA3Q9Y6Q9 1424 aa14.37□□□□□ -0.11
GPATCH1-201ENST00000170564 ZNF335Q9H4Z2 1342 aaPredicted RBP14.36□□□□□ -0.11
GPATCH1-201ENST00000170564 ARHGEF25Q86VW2 580 aa14.36□□□□□ -0.11
GPATCH1-201ENST00000170564 PXDNQ92626 1479 aa14.36□□□□□ -0.11
GPATCH1-201ENST00000170564 CHL1O00533 1208 aa14.36□□□□□ -0.11
GPATCH1-201ENST00000170564 ZKSCAN2Q63HK3 967 aa14.35□□□□□ -0.11
GPATCH1-201ENST00000170564 LRRC59Q96AG4 307 aaKnown RBP14.35□□□□□ -0.11
GPATCH1-201ENST00000170564 MIS18AQ9NYP9 233 aa14.35□□□□□ -0.11
GPATCH1-201ENST00000170564 CAMTA1Q9Y6Y1 1673 aa14.35□□□□□ -0.11
GPATCH1-201ENST00000170564 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
GPATCH1-201ENST00000170564 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
GPATCH1-201ENST00000170564 ATF3P18847 181 aa14.34□□□□□ -0.11
GPATCH1-201ENST00000170564 MVPQ14764 893 aaKnown RBP14.34□□□□□ -0.11
GPATCH1-201ENST00000170564 ALDH1L2Q3SY69 923 aa14.34□□□□□ -0.11
GPATCH1-201ENST00000170564 BRPF1P55201 1214 aaPredicted RBP14.34□□□□□ -0.11
GPATCH1-201ENST00000170564 CENPQQ7L2Z9 268 aaPredicted RBP14.34□□□□□ -0.11
GPATCH1-201ENST00000170564 DZIP1LQ8IYY4 767 aaKnown RBP14.34□□□□□ -0.11
GPATCH1-201ENST00000170564 MRPL50Q8N5N7 158 aaKnown RBP14.34□□□□□ -0.11
GPATCH1-201ENST00000170564 NCAPD2Q15021 1401 aa14.34□□□□□ -0.11
GPATCH1-201ENST00000170564 COL18A1P39060 1754 aa14.33□□□□□ -0.11
GPATCH1-201ENST00000170564 CALD1Q05682 793 aaKnown RBP14.33□□□□□ -0.12
GPATCH1-201ENST00000170564 TWISTNBQ3B726 338 aaPredicted RBP14.33□□□□□ -0.12
GPATCH1-201ENST00000170564 LMOD2Q6P5Q4 547 aa14.33□□□□□ -0.12
GPATCH1-201ENST00000170564 KCNH5Q8NCM2 988 aa14.33□□□□□ -0.12
GPATCH1-201ENST00000170564 SLKQ9H2G2 1235 aaPredicted RBP14.33□□□□□ -0.12
GPATCH1-201ENST00000170564 LMO7Q8WWI1 1683 aa14.32□□□□□ -0.12
GPATCH1-201ENST00000170564 ZBTB7CA1YPR0 619 aa14.32□□□□□ -0.12
GPATCH1-201ENST00000170564 FAM161AQ3B820 660 aa14.32□□□□□ -0.12
GPATCH1-201ENST00000170564 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
GPATCH1-201ENST00000170564 VIRMAQ69YN4 1812 aaKnown RBP14.31□□□□□ -0.12
GPATCH1-201ENST00000170564 IL17REQ8NFR9 667 aa14.31□□□□□ -0.12
GPATCH1-201ENST00000170564 CABLES1Q8TDN4 633 aa14.31□□□□□ -0.12
GPATCH1-201ENST00000170564 UBE2Q2Q8WVN8 375 aa14.31□□□□□ -0.12
GPATCH1-201ENST00000170564 RGS12O14924 1447 aa14.3□□□□□ -0.12
GPATCH1-201ENST00000170564 BRINP3Q76B58 766 aa14.3□□□□□ -0.12
GPATCH1-201ENST00000170564 CADPS2Q86UW7 1296 aa14.3□□□□□ -0.12
GPATCH1-201ENST00000170564 KIF16BQ96L93 1317 aa14.3□□□□□ -0.12
GPATCH1-201ENST00000170564 FAM208AQ9UK61 1670 aaKnown RBP14.29□□□□□ -0.12
GPATCH1-201ENST00000170564 ZC3H6P61129 1189 aaKnown RBP14.29□□□□□ -0.12
GPATCH1-201ENST00000170564 FTSJ3Q8IY81 847 aaKnown RBP14.29□□□□□ -0.12
GPATCH1-201ENST00000170564 ZNF428Q96B54 188 aa14.29□□□□□ -0.12
GPATCH1-201ENST00000170564 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
GPATCH1-201ENST00000170564 MAP3K5Q99683 1374 aa14.28□□□□□ -0.12
GPATCH1-201ENST00000170564 TNS3Q68CZ2 1445 aa14.28□□□□□ -0.12
GPATCH1-201ENST00000170564 GAS2L2Q8NHY3 880 aa14.28□□□□□ -0.12
GPATCH1-201ENST00000170564 GNAT3A8MTJ3 354 aa14.28□□□□□ -0.12
GPATCH1-201ENST00000170564 KIAA0232Q92628 1395 aa14.28□□□□□ -0.12
GPATCH1-201ENST00000170564 ITPRIPQ8IWB1 547 aa14.27□□□□□ -0.12
GPATCH1-201ENST00000170564 ANKRD24Q8TF21 1146 aa14.27□□□□□ -0.12
GPATCH1-201ENST00000170564 ZBTB40Q9NUA8 1239 aa14.27□□□□□ -0.12
GPATCH1-201ENST00000170564 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.13
GPATCH1-201ENST00000170564 ABCC4O15439 1325 aa14.26□□□□□ -0.13
GPATCH1-201ENST00000170564 ERBB3P21860 1342 aa14.26□□□□□ -0.13
GPATCH1-201ENST00000170564 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
GPATCH1-201ENST00000170564 LGR6Q9HBX8 967 aa14.26□□□□□ -0.13
GPATCH1-201ENST00000170564 NPHP3Q7Z494 1330 aa14.26□□□□□ -0.13
GPATCH1-201ENST00000170564 KDM3BQ7LBC6 1761 aa14.25□□□□□ -0.13
GPATCH1-201ENST00000170564 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
GPATCH1-201ENST00000170564 HTATSF1O43719 755 aaKnown RBP14.24□□□□□ -0.13
GPATCH1-201ENST00000170564 ARHGAP45Q92619 1136 aa14.24□□□□□ -0.13
GPATCH1-201ENST00000170564 GZF1Q9H116 711 aaPredicted RBP14.24□□□□□ -0.13
GPATCH1-201ENST00000170564 TSPYL4Q9UJ04 414 aa14.24□□□□□ -0.13
GPATCH1-201ENST00000170564 ABCA3Q99758 1704 aa14.24□□□□□ -0.13
GPATCH1-201ENST00000170564 ZBTB7BO15156 539 aaPredicted RBP14.24□□□□□ -0.13
GPATCH1-201ENST00000170564 C8orf34Q49A92 452 aa14.24□□□□□ -0.13
GPATCH1-201ENST00000170564 NAP1L5Q96NT1 182 aaPredicted RBP14.23□□□□□ -0.13
GPATCH1-201ENST00000170564 SLAIN2Q9P270 581 aa14.23□□□□□ -0.13
GPATCH1-201ENST00000170564 DDX19BQ9UMR2 479 aa14.23□□□□□ -0.13
GPATCH1-201ENST00000170564 SIPA1L3O60292 1781 aaPredicted RBP14.23□□□□□ -0.13
GPATCH1-201ENST00000170564 ADAMTS7Q9UKP4 1686 aa14.23□□□□□ -0.13
GPATCH1-201ENST00000170564 IPO8O15397 1037 aaKnown RBP14.23□□□□□ -0.13
GPATCH1-201ENST00000170564 AAMPQ13685 434 aa14.23□□□□□ -0.13
GPATCH1-201ENST00000170564 CHRNA2Q15822 529 aa14.22□□□□□ -0.13
GPATCH1-201ENST00000170564 G2E3Q7L622 706 aa14.21□□□□□ -0.13
GPATCH1-201ENST00000170564 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
GPATCH1-201ENST00000170564 FAM43AQ8N2R8 423 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms