RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 SH2B1Q9NRF2 756 aaPredicted RBP14.79□□□□□ -0.04
LMCD1-201ENST00000157600 CCDC112Q8NEF3 446 aa14.79□□□□□ -0.04
LMCD1-201ENST00000157600 FBXW7Q969H0 707 aa14.79□□□□□ -0.04
LMCD1-201ENST00000157600 CFAP65Q6ZU64 1925 aaKnown RBP14.79□□□□□ -0.04
LMCD1-201ENST00000157600 NFE2L2Q16236 605 aa14.79□□□□□ -0.04
LMCD1-201ENST00000157600 AFAP1Q8N556 730 aa14.78□□□□□ -0.04
LMCD1-201ENST00000157600 DNAJC2Q99543 621 aaKnown RBP14.78□□□□□ -0.04
LMCD1-201ENST00000157600 CCDC196A0A1B0GTZ2 297 aa14.78□□□□□ -0.04
LMCD1-201ENST00000157600 IKQ13123 557 aaPredicted RBP14.78□□□□□ -0.04
LMCD1-201ENST00000157600 KRT18P05783 430 aaKnown RBP14.78□□□□□ -0.04
LMCD1-201ENST00000157600 USP8P40818 1118 aa14.78□□□□□ -0.04
LMCD1-201ENST00000157600 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
LMCD1-201ENST00000157600 GRPEL1Q9HAV7 217 aa14.78□□□□□ -0.04
LMCD1-201ENST00000157600 AKAP2Q9Y2D5 859 aa14.77□□□□□ -0.04
LMCD1-201ENST00000157600 TRIM21P19474 475 aaKnown RBP14.77□□□□□ -0.04
LMCD1-201ENST00000157600 MPHOSPH8Q99549 860 aa14.77□□□□□ -0.04
LMCD1-201ENST00000157600 PHAXQ9H814 394 aaKnown RBP14.77□□□□□ -0.04
LMCD1-201ENST00000157600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.77□□□□□ -0.04
LMCD1-201ENST00000157600 CDK13Q14004 1512 aaKnown RBP14.77□□□□□ -0.04
LMCD1-201ENST00000157600 SULT6B1Q6IMI4 303 aa14.77□□□□□ -0.04
LMCD1-201ENST00000157600 DNAI2Q9GZS0 605 aa14.77□□□□□ -0.04
LMCD1-201ENST00000157600 SCAND2PQ9GZW5 306 aaPredicted RBP14.77□□□□□ -0.04
LMCD1-201ENST00000157600 CABP4P57796 275 aa14.77□□□□□ -0.05
LMCD1-201ENST00000157600 ESCO1Q5FWF5 840 aa14.77□□□□□ -0.05
LMCD1-201ENST00000157600 SPATA32Q96LK8 384 aa14.77□□□□□ -0.05
LMCD1-201ENST00000157600 GLRX3O76003 335 aaKnown RBP14.77□□□□□ -0.05
LMCD1-201ENST00000157600 CTAGE5O15320 804 aa14.76□□□□□ -0.05
LMCD1-201ENST00000157600 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
LMCD1-201ENST00000157600 KIF1BPQ96EK5 621 aa14.76□□□□□ -0.05
LMCD1-201ENST00000157600 GBP3Q9H0R5 595 aa14.76□□□□□ -0.05
LMCD1-201ENST00000157600 ZFYVE27Q5T4F4 411 aa14.76□□□□□ -0.05
LMCD1-201ENST00000157600 RNF214Q8ND24 703 aa14.76□□□□□ -0.05
LMCD1-201ENST00000157600 CCDC61Q9Y6R9 512 aa14.76□□□□□ -0.05
LMCD1-201ENST00000157600 RAPGEF6Q8TEU7 1601 aa14.76□□□□□ -0.05
LMCD1-201ENST00000157600 ZNF530Q6P9A1 599 aaPredicted RBP14.76□□□□□ -0.05
LMCD1-201ENST00000157600 NUP62CLQ9H1M0 184 aa14.76□□□□□ -0.05
LMCD1-201ENST00000157600 KIAA0754O94854 1291 aa14.75□□□□□ -0.05
LMCD1-201ENST00000157600 AMOTQ4VCS5 1084 aa14.75□□□□□ -0.05
LMCD1-201ENST00000157600 ZNF397Q8NF99 534 aaPredicted RBP14.75□□□□□ -0.05
LMCD1-201ENST00000157600 PTPRCP08575 1304 aa14.75□□□□□ -0.05
LMCD1-201ENST00000157600 DEF6Q9H4E7 631 aa14.75□□□□□ -0.05
LMCD1-201ENST00000157600 GNAT3A8MTJ3 354 aa14.75□□□□□ -0.05
LMCD1-201ENST00000157600 SOGA3Q5TF21 947 aa14.75□□□□□ -0.05
LMCD1-201ENST00000157600 PPP1R12BO60237 982 aaPredicted RBP14.75□□□□□ -0.05
LMCD1-201ENST00000157600 CDCA7LQ96GN5 454 aa14.75□□□□□ -0.05
LMCD1-201ENST00000157600 SCAF11Q99590 1463 aaKnown RBP14.75□□□□□ -0.05
LMCD1-201ENST00000157600 CCDC181Q5TID7 509 aa14.75□□□□□ -0.05
LMCD1-201ENST00000157600 SRGAP3O43295 1099 aa14.74□□□□□ -0.05
LMCD1-201ENST00000157600 UBAC1Q9BSL1 405 aa14.74□□□□□ -0.05
LMCD1-201ENST00000157600 SLFN5Q08AF3 891 aa14.74□□□□□ -0.05
LMCD1-201ENST00000157600 NCOA1Q15788 1441 aa14.74□□□□□ -0.05
LMCD1-201ENST00000157600 RRP9O43818 475 aaKnown RBP14.74□□□□□ -0.05
LMCD1-201ENST00000157600 MAP3K11Q16584 847 aa14.74□□□□□ -0.05
LMCD1-201ENST00000157600 IMMTQ16891 758 aaKnown RBP14.74□□□□□ -0.05
LMCD1-201ENST00000157600 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
LMCD1-201ENST00000157600 CEP126Q9P2H0 1117 aa14.74□□□□□ -0.05
LMCD1-201ENST00000157600 PYM1Q9BRP8 204 aaKnown RBP14.73□□□□□ -0.05
LMCD1-201ENST00000157600 SLC12A5Q9H2X9 1139 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 CABP1Q9NZU7 370 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 BTBD11A6QL63 1104 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 AXDND1Q5T1B0 1012 aaPredicted RBP14.73□□□□□ -0.05
LMCD1-201ENST00000157600 TTC21BQ7Z4L5 1316 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 NEMFO60524 1076 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 ZNF652Q9Y2D9 606 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 ARHGEF11O15085 1522 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 FGFR1OPO95684 399 aaKnown RBP14.73□□□□□ -0.05
LMCD1-201ENST00000157600 MAP9Q49MG5 647 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 AACSQ86V21 672 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 ANKLE2Q86XL3 938 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 MCM4P33991 863 aa14.73□□□□□ -0.05
LMCD1-201ENST00000157600 TMPOP42166 694 aaKnown RBP14.72□□□□□ -0.05
LMCD1-201ENST00000157600 LRPPRCP42704 1394 aaKnown RBP14.72□□□□□ -0.05
LMCD1-201ENST00000157600 FYB1O15117 783 aa14.72□□□□□ -0.05
LMCD1-201ENST00000157600 ZSCAN12O43309 604 aa14.72□□□□□ -0.05
LMCD1-201ENST00000157600 STARD3NLO95772 234 aa14.72□□□□□ -0.05
LMCD1-201ENST00000157600 FOSBP53539 338 aa14.72□□□□□ -0.05
LMCD1-201ENST00000157600 FMNL2Q96PY5 1086 aa14.72□□□□□ -0.05
LMCD1-201ENST00000157600 UPF3BQ9BZI7 483 aaKnown RBP14.72□□□□□ -0.05
LMCD1-201ENST00000157600 SEPT7Q16181 437 aaKnown RBP14.71□□□□□ -0.05
LMCD1-201ENST00000157600 MCM5P33992 734 aa14.71□□□□□ -0.05
LMCD1-201ENST00000157600 EZRP15311 586 aaKnown RBP14.71□□□□□ -0.05
LMCD1-201ENST00000157600 NBPF1Q3BBV0 1214 aa14.71□□□□□ -0.05
LMCD1-201ENST00000157600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.71□□□□□ -0.05
LMCD1-201ENST00000157600 LARP1Q6PKG0 1096 aaKnown RBP14.71□□□□□ -0.05
LMCD1-201ENST00000157600 RAB34Q9BZG1 259 aa14.71□□□□□ -0.05
LMCD1-201ENST00000157600 PROSER2Q86WR7 435 aaPredicted RBP14.71□□□□□ -0.06
LMCD1-201ENST00000157600 ADGRL1O94910 1474 aa14.71□□□□□ -0.06
LMCD1-201ENST00000157600 IL16Q14005 1332 aa14.7□□□□□ -0.06
LMCD1-201ENST00000157600 CCDC183Q5T5S1 534 aa14.7□□□□□ -0.06
LMCD1-201ENST00000157600 INCENPQ9NQS7 918 aa14.7□□□□□ -0.06
LMCD1-201ENST00000157600 NUP160Q12769 1436 aa14.7□□□□□ -0.06
LMCD1-201ENST00000157600 ZSCAN30Q86W11 494 aa14.7□□□□□ -0.06
LMCD1-201ENST00000157600 TSR2Q969E8 191 aaKnown RBP14.7□□□□□ -0.06
LMCD1-201ENST00000157600 PATL2C9JE40 543 aaKnown RBP14.7□□□□□ -0.06
LMCD1-201ENST00000157600 DUOX2Q9NRD8 1548 aa14.69□□□□□ -0.06
LMCD1-201ENST00000157600 BCAR3O75815 825 aa14.69□□□□□ -0.06
LMCD1-201ENST00000157600 POTEJP0CG39 1038 aa14.69□□□□□ -0.06
LMCD1-201ENST00000157600 HSP90AB3PQ58FF7 597 aa14.69□□□□□ -0.06
LMCD1-201ENST00000157600 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
LMCD1-201ENST00000157600 ESPNB1AK53 854 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms