RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ZNF771Q7L3S4 317 aaPredicted RBP22.39■■□□□ 1.17
MBD3-201ENST00000156825 RAI14Q9P0K7 980 aa22.39■■□□□ 1.17
MBD3-201ENST00000156825 TAF7Q15545 349 aaPredicted RBP22.38■■□□□ 1.17
MBD3-201ENST00000156825 PDRG1Q9NUG6 133 aa22.38■■□□□ 1.17
MBD3-201ENST00000156825 ADAMTS2O95450 1211 aa22.38■■□□□ 1.17
MBD3-201ENST00000156825 TDO2P48775 406 aa22.38■■□□□ 1.17
MBD3-201ENST00000156825 ZFYVE27Q5T4F4 411 aa22.38■■□□□ 1.17
MBD3-201ENST00000156825 CDK5RAP3Q96JB5 506 aa22.38■■□□□ 1.17
MBD3-201ENST00000156825 BOLA2Q9H3K6 86 aa22.38■■□□□ 1.17
MBD3-201ENST00000156825 FERMT3Q86UX7 667 aa22.37■■□□□ 1.17
MBD3-201ENST00000156825 ZNF396Q96N95 335 aaPredicted RBP22.37■■□□□ 1.17
MBD3-201ENST00000156825 IQGAP2Q13576 1575 aa22.37■■□□□ 1.17
MBD3-201ENST00000156825 LRP2BPQ9P2M1 347 aa22.37■■□□□ 1.17
MBD3-201ENST00000156825 CCDC69A6NI79 296 aa22.37■■□□□ 1.17
MBD3-201ENST00000156825 MYD88Q99836 296 aa22.36■■□□□ 1.17
MBD3-201ENST00000156825 CCDC39Q9UFE4 941 aa22.36■■□□□ 1.17
MBD3-201ENST00000156825 TRIM22Q8IYM9 498 aa22.36■■□□□ 1.17
MBD3-201ENST00000156825 KCNH5Q8NCM2 988 aa22.36■■□□□ 1.17
MBD3-201ENST00000156825 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
MBD3-201ENST00000156825 FAM83GA6ND36 823 aa22.36■■□□□ 1.17
MBD3-201ENST00000156825 ZHX3Q9H4I2 956 aa22.35■■□□□ 1.17
MBD3-201ENST00000156825 PHF8Q9UPP1 1060 aa22.35■■□□□ 1.17
MBD3-201ENST00000156825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.35■■□□□ 1.172e-7■■□□□ 13.7
MBD3-201ENST00000156825 WDR33Q9C0J8 1336 aaKnown RBP22.35■■□□□ 1.17
MBD3-201ENST00000156825 WASLO00401 505 aaPredicted RBP22.35■■□□□ 1.17
MBD3-201ENST00000156825 CASTP20810 708 aaKnown RBP22.35■■□□□ 1.17
MBD3-201ENST00000156825 KRT18P05783 430 aaKnown RBP22.34■■□□□ 1.17
MBD3-201ENST00000156825 ADGRL1O94910 1474 aa22.34■■□□□ 1.17
MBD3-201ENST00000156825 CNKSR2Q8WXI2 1034 aa22.34■■□□□ 1.17
MBD3-201ENST00000156825 KRT85P78386 507 aa22.34■■□□□ 1.17
MBD3-201ENST00000156825 CCDC8Q9H0W5 538 aaPredicted RBP22.34■■□□□ 1.17
MBD3-201ENST00000156825 POGZQ7Z3K3 1410 aa22.34■■□□□ 1.17
MBD3-201ENST00000156825 METTL24Q5JXM2 366 aa22.34■■□□□ 1.17
MBD3-201ENST00000156825 ZSCAN29Q8IWY8 852 aaPredicted RBP22.34■■□□□ 1.17
MBD3-201ENST00000156825 TNMDQ9H2S6 317 aa22.33■■□□□ 1.17
MBD3-201ENST00000156825 ANKRD1Q15327 319 aa22.33■■□□□ 1.17
MBD3-201ENST00000156825 MX1P20591 662 aa22.33■■□□□ 1.17
MBD3-201ENST00000156825 TXLNAP40222 546 aa22.33■■□□□ 1.16
MBD3-201ENST00000156825 IL27Q8NEV9 243 aa22.32■■□□□ 1.16
MBD3-201ENST00000156825 LARP6Q9BRS8 491 aaKnown RBP22.32■■□□□ 1.16
MBD3-201ENST00000156825 STARD3NLO95772 234 aa22.32■■□□□ 1.16
MBD3-201ENST00000156825 NCOA1Q15788 1441 aa22.31■■□□□ 1.16
MBD3-201ENST00000156825 LRRFIP2Q9Y608 721 aaKnown RBP22.31■■□□□ 1.16
MBD3-201ENST00000156825 PRPF40BQ6NWY9 871 aaKnown RBP22.31■■□□□ 1.16
MBD3-201ENST00000156825 KIF1BPQ96EK5 621 aa22.31■■□□□ 1.16
MBD3-201ENST00000156825 ANXA1P04083 346 aa22.31■■□□□ 1.16
MBD3-201ENST00000156825 UBAC1Q9BSL1 405 aa22.31■■□□□ 1.16
MBD3-201ENST00000156825 TMOD3Q9NYL9 352 aa22.31■■□□□ 1.16
MBD3-201ENST00000156825 SERPINC1P01008 464 aa22.3■■□□□ 1.16
MBD3-201ENST00000156825 ODF2Q5BJF6 829 aa22.3■■□□□ 1.16
MBD3-201ENST00000156825 TRIM27P14373 513 aa22.3■■□□□ 1.16
MBD3-201ENST00000156825 CAGE1Q8TC20 777 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 NOS1P29475 1434 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 LETM1O95202 739 aaPredicted RBP22.29■■□□□ 1.16
MBD3-201ENST00000156825 AEBP1Q8IUX7 1158 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 SPATA32Q96LK8 384 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 IGHMBP2P38935 993 aaKnown RBP22.29■■□□□ 1.16
MBD3-201ENST00000156825 JMYQ8N9B5 988 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 PTPN23Q9H3S7 1636 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 CCDC83Q8IWF9 413 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 CCAR1Q8IX12 1150 aaKnown RBP22.29■■□□□ 1.16
MBD3-201ENST00000156825 TMEM132AQ24JP5 1023 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 JARID2Q92833 1246 aaPredicted RBP22.29■■□□□ 1.16
MBD3-201ENST00000156825 AIDAQ96BJ3 306 aa22.29■■□□□ 1.16
MBD3-201ENST00000156825 ZSCAN25Q6NSZ9 544 aa22.28■■□□□ 1.16
MBD3-201ENST00000156825 CCDC192P0DO97 292 aa22.28■■□□□ 1.16
MBD3-201ENST00000156825 MCM4P33991 863 aa22.28■■□□□ 1.16
MBD3-201ENST00000156825 SSBP05455 408 aaKnown RBP eCLIP22.28■■□□□ 1.16
MBD3-201ENST00000156825 GPTP24298 496 aa22.28■■□□□ 1.16
MBD3-201ENST00000156825 TSHZ3Q63HK5 1081 aa22.28■■□□□ 1.16
MBD3-201ENST00000156825 CCDC82Q8N4S0 544 aa22.28■■□□□ 1.16
MBD3-201ENST00000156825 ZBTB3Q9H5J0 574 aa22.28■■□□□ 1.16
MBD3-201ENST00000156825 LARP1Q6PKG0 1096 aaKnown RBP22.27■■□□□ 1.16
MBD3-201ENST00000156825 FILIP1LQ4L180 1135 aa22.27■■□□□ 1.16
MBD3-201ENST00000156825 SF3B2Q13435 895 aaKnown RBP22.27■■□□□ 1.16
MBD3-201ENST00000156825 SKIDA1Q1XH10 827 aa22.27■■□□□ 1.16
MBD3-201ENST00000156825 DISP3Q9P2K9 1392 aa22.27■■□□□ 1.16
MBD3-201ENST00000156825 FAM177A1Q8N128 213 aaPredicted RBP22.27■■□□□ 1.16
MBD3-201ENST00000156825 RUFY1Q96T51 708 aa22.27■■□□□ 1.16
MBD3-201ENST00000156825 MINDY4BA8MYZ0 360 aa22.26■■□□□ 1.15
MBD3-201ENST00000156825 MAGEC2Q9UBF1 373 aaPredicted RBP22.26■■□□□ 1.15
MBD3-201ENST00000156825 CHRNA2Q15822 529 aa22.26■■□□□ 1.15
MBD3-201ENST00000156825 GLRX3O76003 335 aaKnown RBP22.25■■□□□ 1.15
MBD3-201ENST00000156825 CTNNA3Q9UI47 895 aa22.25■■□□□ 1.15
MBD3-201ENST00000156825 DNAAF4Q8WXU2 420 aa22.25■■□□□ 1.15
MBD3-201ENST00000156825 ATP5J2-PTCD1G3V325 749 aa22.24■■□□□ 1.15
MBD3-201ENST00000156825 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
MBD3-201ENST00000156825 SOGA3Q5TF21 947 aa22.24■■□□□ 1.15
MBD3-201ENST00000156825 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
MBD3-201ENST00000156825 ARGLU1Q9NWB6 273 aaPredicted RBP22.24■■□□□ 1.15
MBD3-201ENST00000156825 CAMK4Q16566 473 aa22.24■■□□□ 1.15
MBD3-201ENST00000156825 FLIIQ13045 1269 aa22.23■■□□□ 1.15
MBD3-201ENST00000156825 GRPEL1Q9HAV7 217 aa22.23■■□□□ 1.15
MBD3-201ENST00000156825 A0A087WZG4 1122 aa22.23■■□□□ 1.15
MBD3-201ENST00000156825 IFIT1P09914 478 aaKnown RBP22.23■■□□□ 1.15
MBD3-201ENST00000156825 USP5P45974 858 aa22.23■■□□□ 1.15
MBD3-201ENST00000156825 GUCY1B3Q02153 619 aa22.23■■□□□ 1.15
MBD3-201ENST00000156825 PPFIA3O75145 1194 aa22.23■■□□□ 1.15
MBD3-201ENST00000156825 ALDH1L2Q3SY69 923 aa22.23■■□□□ 1.15
MBD3-201ENST00000156825 FILIP1Q7Z7B0 1213 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms