RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 SSH1Q8WYL5 1049 aa13.73□□□□□ -0.21
PKP2-201ENST00000070846 GCC1Q96CN9 775 aa13.73□□□□□ -0.21
PKP2-201ENST00000070846 ANKIB1Q9P2G1 1089 aa13.73□□□□□ -0.21
PKP2-201ENST00000070846 DUOX2Q9NRD8 1548 aa13.73□□□□□ -0.21
PKP2-201ENST00000070846 TTC21AQ8NDW8 1320 aa13.73□□□□□ -0.21
PKP2-201ENST00000070846 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
PKP2-201ENST00000070846 RFC4P35249 363 aa13.73□□□□□ -0.21
PKP2-201ENST00000070846 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
PKP2-201ENST00000070846 DDX49Q9Y6V7 483 aaKnown RBP13.73□□□□□ -0.21
PKP2-201ENST00000070846 MVPQ14764 893 aaKnown RBP13.72□□□□□ -0.21
PKP2-201ENST00000070846 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 ATP5J2-PTCD1G3V325 749 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 KIAA0556O60303 1618 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 MSNP26038 577 aaKnown RBP13.72□□□□□ -0.21
PKP2-201ENST00000070846 SLC39A6Q13433 755 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 TMEM57Q8N5G2 664 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 DISP3Q9P2K9 1392 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
PKP2-201ENST00000070846 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
PKP2-201ENST00000070846 C6orf229H3BNL8 230 aa13.71□□□□□ -0.21
PKP2-201ENST00000070846 SLFN5Q08AF3 891 aa13.71□□□□□ -0.21
PKP2-201ENST00000070846 IFIT5Q13325 482 aaKnown RBP13.71□□□□□ -0.21
PKP2-201ENST00000070846 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.21
PKP2-201ENST00000070846 TEX13AQ9BXU3 409 aaPredicted RBP13.71□□□□□ -0.21
PKP2-201ENST00000070846 WWC3Q9ULE0 1092 aa13.71□□□□□ -0.21
PKP2-201ENST00000070846 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.22
PKP2-201ENST00000070846 TSHZ2Q9NRE2 1034 aa13.71□□□□□ -0.22
PKP2-201ENST00000070846 TMOD2Q9NZR1 351 aa13.71□□□□□ -0.22
PKP2-201ENST00000070846 HIP1O00291 1037 aa13.7□□□□□ -0.22
PKP2-201ENST00000070846 BICD2Q8TD16 824 aa13.7□□□□□ -0.22
PKP2-201ENST00000070846 BTG4Q9NY30 223 aa13.7□□□□□ -0.22
PKP2-201ENST00000070846 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
PKP2-201ENST00000070846 PSMA5P28066 241 aa13.7□□□□□ -0.22
PKP2-201ENST00000070846 NEK4P51957 841 aa13.7□□□□□ -0.22
PKP2-201ENST00000070846 AEBP1Q8IUX7 1158 aa13.7□□□□□ -0.22
PKP2-201ENST00000070846 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
PKP2-201ENST00000070846 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
PKP2-201ENST00000070846 BECN2A8MW95 431 aa13.69□□□□□ -0.22
PKP2-201ENST00000070846 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
PKP2-201ENST00000070846 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
PKP2-201ENST00000070846 SNRPA1P09661 255 aaKnown RBP13.69□□□□□ -0.22
PKP2-201ENST00000070846 IL2RBP14784 551 aa13.69□□□□□ -0.22
PKP2-201ENST00000070846 XBP1P17861 261 aa13.69□□□□□ -0.22
PKP2-201ENST00000070846 ZNF622Q969S3 477 aaKnown RBP eCLIP13.69□□□□□ -0.22
PKP2-201ENST00000070846 FLIIQ13045 1269 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 CAVIN4Q5BKX8 364 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 DISP1Q96F81 1524 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 TDO2P48775 406 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 ATP10AO60312 1499 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
PKP2-201ENST00000070846 UBE3BQ7Z3V4 1068 aa13.67□□□□□ -0.22
PKP2-201ENST00000070846 JARID2Q92833 1246 aaPredicted RBP13.67□□□□□ -0.22
PKP2-201ENST00000070846 DDX17Q92841 729 aaKnown RBP13.67□□□□□ -0.22
PKP2-201ENST00000070846 ZSCAN25Q6NSZ9 544 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 CCDC47Q96A33 483 aaKnown RBP13.66□□□□□ -0.22
PKP2-201ENST00000070846 CEP89Q96ST8 783 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 FANCIQ9NVI1 1328 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 NBPF6Q5VWK0 638 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 LDHAL6AQ6ZMR3 332 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 NBPF5PQ86XG9 351 aaPredicted RBP13.66□□□□□ -0.22
PKP2-201ENST00000070846 NBPF4Q96M43 638 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 NAP1L5Q96NT1 182 aaPredicted RBP13.66□□□□□ -0.22
PKP2-201ENST00000070846 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
PKP2-201ENST00000070846 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
PKP2-201ENST00000070846 EIF4A2Q14240 407 aaKnown RBP13.65□□□□□ -0.22
PKP2-201ENST00000070846 CEP170Q5SW79 1584 aa13.65□□□□□ -0.22
PKP2-201ENST00000070846 NSD2O96028 1365 aa13.65□□□□□ -0.22
PKP2-201ENST00000070846 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.22
PKP2-201ENST00000070846 RARSP54136 660 aaKnown RBP13.65□□□□□ -0.22
PKP2-201ENST00000070846 TFCP2L1Q9NZI6 479 aa13.65□□□□□ -0.22
PKP2-201ENST00000070846 NFATC2IPQ8NCF5 419 aa13.65□□□□□ -0.22
PKP2-201ENST00000070846 KIF1BPQ96EK5 621 aa13.65□□□□□ -0.22
PKP2-201ENST00000070846 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
PKP2-201ENST00000070846 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
PKP2-201ENST00000070846 NUP133Q8WUM0 1156 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
PKP2-201ENST00000070846 AKAP2Q9Y2D5 859 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 ANKRD36BQ8N2N9 1353 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 ANKRD18BA2A2Z9 1011 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 LTKP29376 864 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 BOLA2Q9H3K6 86 aa13.64□□□□□ -0.23
PKP2-201ENST00000070846 LRRFIP2Q9Y608 721 aaKnown RBP13.64□□□□□ -0.23
PKP2-201ENST00000070846 CHD1LQ86WJ1 897 aa13.63□□□□□ -0.23
PKP2-201ENST00000070846 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
PKP2-201ENST00000070846 CCDC8Q9H0W5 538 aaPredicted RBP13.63□□□□□ -0.23
PKP2-201ENST00000070846 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
PKP2-201ENST00000070846 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
PKP2-201ENST00000070846 GOLGA6L3A6NEY3 463 aa13.63□□□□□ -0.23
PKP2-201ENST00000070846 COPS6Q7L5N1 327 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms