RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CPS1P31327 1500 aa14.74□□□□□ -0.05
TSPAN9-201ENST00000011898 RARSP54136 660 aaKnown RBP14.73□□□□□ -0.05
TSPAN9-201ENST00000011898 PHF14O94880 888 aa14.73□□□□□ -0.05
TSPAN9-201ENST00000011898 MPNDQ8N594 471 aa14.73□□□□□ -0.05
TSPAN9-201ENST00000011898 DIAPH3Q9NSV4 1193 aa14.73□□□□□ -0.05
TSPAN9-201ENST00000011898 NSD3Q9BZ95 1437 aa14.73□□□□□ -0.05
TSPAN9-201ENST00000011898 CT47B1P0C2W7 299 aaPredicted RBP14.73□□□□□ -0.05
TSPAN9-201ENST00000011898 PIP4K2BP78356 416 aa14.73□□□□□ -0.05
TSPAN9-201ENST00000011898 HMGN5P82970 282 aaKnown RBP14.73□□□□□ -0.05
TSPAN9-201ENST00000011898 PTPRUQ92729 1446 aa14.72□□□□□ -0.05
TSPAN9-201ENST00000011898 FKBP5Q13451 457 aaPredicted RBP14.72□□□□□ -0.05
TSPAN9-201ENST00000011898 HDAC5Q9UQL6 1122 aa14.72□□□□□ -0.05
TSPAN9-201ENST00000011898 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
TSPAN9-201ENST00000011898 LMTK3Q96Q04 1460 aa14.71□□□□□ -0.05
TSPAN9-201ENST00000011898 INTS3Q68E01 1043 aaKnown RBP14.71□□□□□ -0.05
TSPAN9-201ENST00000011898 SETQ01105 290 aaPredicted RBP14.71□□□□□ -0.05
TSPAN9-201ENST00000011898 GPS2Q13227 327 aa14.71□□□□□ -0.05
TSPAN9-201ENST00000011898 TWISTNBQ3B726 338 aaPredicted RBP14.71□□□□□ -0.05
TSPAN9-201ENST00000011898 KNDC1Q76NI1 1749 aa14.71□□□□□ -0.05
TSPAN9-201ENST00000011898 TMPOP42166 694 aaKnown RBP14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 ZSCAN30Q86W11 494 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 ANKRD36BQ8N2N9 1353 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 CDC45O75419 566 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 GPATCH3Q96I76 525 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 CCDC39Q9UFE4 941 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 CLCN1P35523 988 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 ANO2Q9NQ90 1003 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 NKTRP30414 1462 aaKnown RBP14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 PARD3Q8TEW0 1356 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 PER1O15534 1290 aaPredicted RBP14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 EIF2S2P20042 333 aaKnown RBP14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
TSPAN9-201ENST00000011898 MSH6P52701 1360 aa14.69□□□□□ -0.06
TSPAN9-201ENST00000011898 TRERF1Q96PN7 1200 aa14.69□□□□□ -0.06
TSPAN9-201ENST00000011898 ZNF330Q9Y3S2 320 aaPredicted RBP14.69□□□□□ -0.06
TSPAN9-201ENST00000011898 PPIP5K1Q6PFW1 1433 aa14.69□□□□□ -0.06
TSPAN9-201ENST00000011898 ERICH4A6NGS2 130 aa14.69□□□□□ -0.06
TSPAN9-201ENST00000011898 MCM4P33991 863 aa14.69□□□□□ -0.06
TSPAN9-201ENST00000011898 RBM33Q96EV2 1170 aaKnown RBP14.69□□□□□ -0.06
TSPAN9-201ENST00000011898 NUCB2P80303 420 aa14.69□□□□□ -0.06
TSPAN9-201ENST00000011898 TULP4Q9NRJ4 1543 aa14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 TAF3Q5VWG9 929 aa14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 C19orf44Q9H6X5 657 aa14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 MCTP1Q6DN14 999 aa14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 CCAR2Q8N163 923 aaKnown RBP14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 GCC1Q96CN9 775 aa14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 SETD1AO15047 1707 aaKnown RBP14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 CAVIN1Q6NZI2 390 aaKnown RBP14.68□□□□□ -0.06
TSPAN9-201ENST00000011898 TEFQ10587 303 aa14.67□□□□□ -0.06
TSPAN9-201ENST00000011898 CADPS2Q86UW7 1296 aa14.67□□□□□ -0.06
TSPAN9-201ENST00000011898 SSH1Q8WYL5 1049 aa14.67□□□□□ -0.06
TSPAN9-201ENST00000011898 TMEM57Q8N5G2 664 aa14.67□□□□□ -0.06
TSPAN9-201ENST00000011898 IGHDP01880 384 aa14.66□□□□□ -0.06
TSPAN9-201ENST00000011898 GNL2Q13823 731 aaKnown RBP14.66□□□□□ -0.06
TSPAN9-201ENST00000011898 ADGRL3Q9HAR2 1447 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 NOM1Q5C9Z4 860 aaKnown RBP14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 CHD1LQ86WJ1 897 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 IFT57Q9NWB7 429 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 ISY1Q9ULR0 285 aaKnown RBP14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 PAXIP1Q6ZW49 1069 aaPredicted RBP14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 FCHSD2O94868 740 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 PSME1Q06323 249 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 NSD2O96028 1365 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 TMEM94Q12767 1356 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 PHF8Q9UPP1 1060 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 CHMP3Q9Y3E7 222 aa14.65□□□□□ -0.06
TSPAN9-201ENST00000011898 XPCQ01831 940 aaPredicted RBP14.64□□□□□ -0.07
TSPAN9-201ENST00000011898 CALRP27797 417 aaKnown RBP14.64□□□□□ -0.07
TSPAN9-201ENST00000011898 SULT6B1Q6IMI4 303 aa14.64□□□□□ -0.07
TSPAN9-201ENST00000011898 ANKARQ7Z5J8 1434 aa14.63□□□□□ -0.07
TSPAN9-201ENST00000011898 PDCL2Q8N4E4 241 aa14.63□□□□□ -0.07
TSPAN9-201ENST00000011898 THUMPD2Q9BTF0 503 aaKnown RBP14.63□□□□□ -0.07
TSPAN9-201ENST00000011898 A0A1W2PP64 1363 aa14.63□□□□□ -0.07
TSPAN9-201ENST00000011898 ATP7BP35670 1465 aa14.63□□□□□ -0.07
TSPAN9-201ENST00000011898 RRAGDQ9NQL2 400 aaPredicted RBP14.63□□□□□ -0.07
TSPAN9-201ENST00000011898 C9orf78Q9NZ63 289 aaPredicted RBP14.62□□□□□ -0.07
TSPAN9-201ENST00000011898 ACEP12821 1306 aa14.62□□□□□ -0.07
TSPAN9-201ENST00000011898 XRN1Q8IZH2 1706 aaKnown RBP14.62□□□□□ -0.07
TSPAN9-201ENST00000011898 PANK2Q9BZ23 570 aa14.62□□□□□ -0.07
TSPAN9-201ENST00000011898 ATP6V1DQ9Y5K8 247 aa14.62□□□□□ -0.07
TSPAN9-201ENST00000011898 ZNF335Q9H4Z2 1342 aaPredicted RBP14.61□□□□□ -0.07
TSPAN9-201ENST00000011898 ZNF428Q96B54 188 aa14.61□□□□□ -0.07
TSPAN9-201ENST00000011898 NPC1L1Q9UHC9 1359 aa14.61□□□□□ -0.07
TSPAN9-201ENST00000011898 PLEKHG3A1L390 1219 aa14.61□□□□□ -0.07
TSPAN9-201ENST00000011898 PATL2C9JE40 543 aaKnown RBP14.61□□□□□ -0.07
TSPAN9-201ENST00000011898 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
TSPAN9-201ENST00000011898 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
TSPAN9-201ENST00000011898 VGLL3A8MV65 326 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 HSP90B1P14625 803 aaKnown RBP14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 NEK4P51957 841 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 NCOA3Q9Y6Q9 1424 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 EVA1CP58658 441 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 NLRP6P59044 892 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 RRS1Q15050 365 aaKnown RBP14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 NOC3LQ8WTT2 800 aaKnown RBP14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 TRIM27P14373 513 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 RABEP1Q15276 862 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 NUTM2GQ5VZR2 741 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 CHD2O14647 1828 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms