RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 CltcQ68FD5 1675 aaKnown RBP10.56□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Gm20521D3Z5F7 333 aa10.56□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Trim30aP15533 496 aa10.56□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Kiaa0754Q69ZZ9 979 aa10.56□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Gdpd2Q9ESM6 539 aa10.56□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Ppp1r37Q8BKR5 712 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Anapc15-psA0A140T8L6 141 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Rangap1P46061 589 aaKnown RBP10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Nxf2Q4ZGD8 691 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Ppip5k2Q6ZQB6 1129 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Chmp4cQ9D7F7 232 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Cyp27a1Q9DBG1 533 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Ercc6l2Q9JIM3 1537 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Naip7Q9JIB3 1402 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Kiaa0556Q8C753 1610 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 CastP51125 788 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Nutm1Q8BHP2 1126 aa10.55□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Ccdc60Q8C4J0 545 aa10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 CenppQ9CZ92 286 aa10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Mx2Q9WVP9 655 aa10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Myo3aQ8K3H5 1613 aa10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Fam184aE9PW83 1143 aa10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Srpk2O54781 681 aaKnown RBP10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 EzrP26040 586 aaKnown RBP10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Adcy5P84309 1262 aa10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 CtifQ6PEE2 600 aaKnown RBP10.54□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Scaf11E9PZM7 1456 aaKnown RBP10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Uggt2E9Q4X2 1504 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Kiaa1211Q5PR69 1207 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Tbc1d30Q69ZT9 766 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Prdm4Q80V63 803 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Adam1bQ8R534 806 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 SrrtQ99MR6 875 aaKnown RBP10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Q9D9H8 365 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Swt1Q9DBQ9 907 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 CarsQ9ER72 831 aaKnown RBP10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Fez2Q6TYB5 348 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Gtf2e1Q9D0D5 440 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Akap12Q9WTQ5 1684 aa10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Cep152A2AUM9 1736 aaKnown RBP10.53□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Brpf1B2RRD7 1212 aa10.52□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 U2af1Q9D883 239 aaKnown RBP10.52□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Mrvi1Q9WUX5 899 aaKnown RBP10.52□□□□□ -0.72
Pdgfra-208ENSMUST00000202681 Gpatch11Q3UFS4 262 aa10.52□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Cnksr2Q80YA9 1032 aa10.52□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Trpm1Q2TV84 1622 aa10.52□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Knl1Q66JQ7 1612 aa10.52□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Prdm2A2A7B5 1709 aaKnown RBP10.52□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Hfm1D3Z4R1 1434 aa10.52□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Ccdc171E9Q1U1 1324 aa10.52□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Gm973E9Q295 1059 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Nucb2P81117 420 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Shq1Q7TMX5 569 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Usp40Q8BWR4 1235 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Ppp6r3Q922D4 844 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Elp1Q7TT37 1333 aaKnown RBP10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Atp2b2Q9R0K7 1198 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Adgrl1Q80TR1 1466 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Ankrd50F7BE84 1390 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Ttc21aQ8C0S4 1314 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Gm45015A0A140LII9 184 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Gm18336A0A140LIU8 765 aa10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 G3bp1P97855 465 aaKnown RBP10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Zc3h15Q3TIV5 426 aaKnown RBP10.51□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Talpid3E9PV87 1520 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Skint5A7XUY5 1461 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Puf60Q3UEB3 564 aaKnown RBP10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Cgnl1Q6AW69 1298 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Tsen2Q6P7W5 460 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Abca8aQ8K442 1620 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 IghaA0A0A6YXW6 389 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Map7d2A2AG50 781 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Nucb1Q02819 459 aaKnown RBP10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Igsf3Q6ZQA6 1194 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Zmynd15Q8C0R7 736 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 WdpcpQ8C456 722 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Cc2d1aQ8K1A6 943 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 MvpQ9EQK5 861 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Adgrb3Q80ZF8 1522 aa10.5□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Prrc2bQ7TPM1 1486 aaKnown RBP10.49□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Znf326O88291 580 aa10.49□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Trim27Q62158 513 aa10.49□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Kcnf1Q7TSH7 493 aa10.49□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 TprnA2AI08 749 aaKnown RBP10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Casc1Q6TDU8 730 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Ddx41Q91VN6 622 aaKnown RBP10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Oas2E9Q9A9 742 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Capn2O08529 700 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Txndc2Q6P902 515 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Aldh1l1Q8R0Y6 902 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Tbc1d8Q9Z1A9 1134 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 PtprmP28828 1452 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Ehbp1l1Q99MS7 1716 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Pdia3P27773 505 aaKnown RBP10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 NexnQ7TPW1 607 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Rimbp2Q80U40 1072 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 4930548H24RikQ9D496 437 aa10.48□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Med14A2ABV5 1459 aaKnown RBP10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Ahdc1Q6PAL7 1594 aaKnown RBP10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Cdkn1cP49919 348 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms