RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Cep131Q62036 1060 aa18.25■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Adck5Q80V03 582 aa18.25■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Naip5Q9R016 1403 aa18.25■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Anapc15-psA0A140T8L6 141 aa18.25■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Spag5Q7TME2 1165 aa18.25■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Gps2Q921N8 327 aa18.24■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Larp1Q6ZQ58 1072 aaKnown RBP18.24■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Brf1Q8CFK2 676 aa18.24■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Fam13aQ8BGI4 693 aa18.24■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Riok1Q922Q2 567 aa18.24■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Lrrfip1Q3UZ39 729 aaKnown RBP18.23■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Lrrc45Q8CIM1 670 aa18.23■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Gjb2Q00977 226 aa18.23■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 ItpripQ3TNL8 555 aa18.23■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 MicalclQ9D5U9 680 aa18.23■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Strn4P58404 760 aa18.23■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 SynmQ70IV5 1561 aa18.23■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Gm21663A0A0G2JE01 267 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Gm7361D3Z6R1 267 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 5031410I06RikE9Q4E0 267 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Gm1979E9QAN3 267 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Gm5862K7N5V5 267 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Gm10220K7N660 267 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Slc13a4Q8BZ82 625 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Trim34aQ99PP6 485 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Prkar2bP31324 416 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Ttc19Q8CC21 365 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Rbm5Q91YE7 815 aaKnown RBP18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Ccdc39Q9D5Y1 937 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Speer4bQ9D9F7 267 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 AidaQ8C4Q6 305 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Cep89Q9CZX2 791 aa18.22■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Map3k13Q1HKZ5 959 aa18.21■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Spty2d1Q68FG3 682 aa18.21■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Kcnh5Q920E3 988 aa18.21■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Mrvi1Q9WUX5 899 aaKnown RBP18.21■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Ncbp1Q3UYV9 790 aaKnown RBP18.21■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Pafah1b1P63005 410 aaKnown RBP18.21■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 HnrnpmQ9D0E1 729 aaKnown RBP18.21■□□□□ 0.51
Pcdha9-201ENSMUST00000115659 Ppp1r42Q8R1Z4 357 aa18.2■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Hvcn1Q3U2S8 269 aa18.2■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Eif3bQ8JZQ9 803 aaKnown RBP18.2■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Gnl2Q99LH1 728 aaKnown RBP18.2■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Ift57Q8BXG3 429 aa18.2■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 TnikP83510 1323 aa18.2■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Pik3c2gO70167 1506 aa18.2■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Slc26a8Q8R0C3 999 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 ZgpatQ8VDM1 511 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Rcan3Q9JKK0 239 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Fkbp5Q64378 456 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Pof1bQ8K4L4 587 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 CenphQ9QYM8 241 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Plb1Q3TTY0 1478 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Ubap1lG3UW59 384 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Evi5lH3BKQ3 813 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Pdcl2Q78Y63 240 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 ZwintQ9CQU5 252 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 RalgapbQ8BQZ4 1484 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Gm21680A0A0G2JGR8 267 aa18.19■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Fam135aQ6NS59 1506 aa18.18■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Pdia4P08003 638 aaKnown RBP18.18■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Sytl4Q9R0Q1 673 aa18.18■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Q3UPC7 1272 aa18.17■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Trim11Q99PQ2 467 aa18.17■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Atxn3Q9CVD2 355 aa18.17■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Rapgef4Q9EQZ6 1011 aa18.17■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Camsap2Q8C1B1 1461 aa18.17■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Cpa2Q504N0 417 aa18.16■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Iqca1Q9CUL5 857 aa18.16■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Terf2O35144 541 aa18.16■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Bcl11bQ99PV8 884 aa18.16■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Pik3r4Q8VD65 1358 aa18.16■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Trim55G3X8Y1 545 aa18.16■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 PaskQ8CEE6 1383 aa18.15■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Smarca5Q91ZW3 1051 aaKnown RBP18.15■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Mapk8ip1Q9WVI9 707 aa18.15■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Sf3b2Q3UJB0 878 aaKnown RBP18.15■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Abcf1Q6P542 837 aaKnown RBP18.15■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Rsph6aQ8CDR2 708 aa18.15■□□□□ 0.5
Pcdha9-201ENSMUST00000115659 Ankrd44B2RXR6 993 aa18.14■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Paf1Q8K2T8 535 aa18.14■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Chrna2Q91X60 512 aa18.14■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Brms1Q99N20 246 aa18.14■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Dnajc2P54103 621 aaKnown RBP18.14■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Tbc1d32Q3URV1 1296 aa18.14■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Tbc1d9Q3UYK3 1264 aa18.14■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Bag3Q9JLV1 577 aaKnown RBP18.14■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ccdc83Q9D4V3 305 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Limch1Q3UH68 1057 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Znf771Q8BJ90 317 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Cep55Q8BT07 462 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 GphnQ8BUV3 769 aaKnown RBP18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Ankrd1Q9CR42 319 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Gas2l3Q3UWW6 683 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Stxbp4Q9WV89 557 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Q3UJC8 639 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Igbp1bQ9QZ29 343 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Frmd3Q8BHD4 595 aa18.13■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Crocc2F6XLV1 1638 aa18.12■□□□□ 0.49
Pcdha9-201ENSMUST00000115659 Wdr63B2RY71 923 aa18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms