RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Ltv1Q6NSQ7 470 aaKnown RBP13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Slc26a8Q8R0C3 999 aa13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Erich4Q3UNU4 136 aa13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Elp1Q7TT37 1333 aaKnown RBP13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Cep89Q9CZX2 791 aa13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Dmrt2Q8BG36 561 aa13.08□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Olfml1Q8BSH2 233 aa13.08□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Slc5a1Q8C3K6 665 aa13.08□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Zscan20B2KFW1 1030 aa13.08□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Cct4P80315 539 aaKnown RBP13.08□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Slc12a5Q91V14 1138 aa13.08□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Rufy2Q8R4C2 606 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Irgm2A0A140LIF8 407 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Mctp1E9PV86 951 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Ppip5k2Q6ZQB6 1129 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Supt6hQ62383 1726 aaKnown RBP13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 SfswapQ3USH5 945 aaKnown RBP13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Plekhm2Q80TQ5 1018 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Krt84Q99M73 603 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Kcnn1Q9EQR3 537 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Krt85Q9Z2T6 507 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Aldh1l1Q8R0Y6 902 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Ppp1r42Q8R1Z4 357 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Gapvd1Q6PAR5 1458 aa13.07□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Dhx8A2A4P0 1244 aaKnown RBP13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 NefhP19246 1090 aa13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Samm50Q8BGH2 469 aa13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 InsrP15208 1372 aa13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Golim4Q8BXA1 655 aa13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Fam13aQ8BGI4 693 aa13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Galntl5Q9D4M9 431 aa13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Fancd2Q80V62 1450 aa13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Prkar2bP31324 416 aa13.06□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Rprd2Q6NXI6 1469 aaKnown RBP13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Tubb6Q922F4 447 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Cdc45Q9Z1X9 566 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Samd9lQ69Z37 1561 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Pdcl3Q8BVF2 240 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 AidaQ8C4Q6 305 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Cep57l1Q8VDS7 400 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Sos1Q62245 1319 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Pof1bQ8K4L4 587 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Cdkn1cP49919 348 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Nol11Q8BJW5 723 aaKnown RBP13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Ccdc178Q8CDV0 866 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Riok1Q922Q2 567 aa13.05□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Ncoa1P70365 1447 aa13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 ArsiQ32KI9 573 aa13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Ncbp1Q3UYV9 790 aaKnown RBP13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Zmym4A2A791 1549 aaKnown RBP13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Mns1Q61884 491 aa13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Themis2Q91YX0 663 aa13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Tango6Q8C3S2 1079 aa13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Ssh1Q76I79 1042 aa13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Tnni2P13412 182 aa13.04□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Zranb1Q7M760 708 aa13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Idi2Q8BFZ6 227 aa13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Cdkl5Q3UTQ8 938 aa13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Cdca7Q9D0M2 382 aa13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Bcar3Q9QZK2 820 aa13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Cyp26c1B2RXA7 518 aa13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Ces1hD3Z298 562 aa13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Klc3Q91W40 508 aa13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Nop14Q8R3N1 860 aaKnown RBP13.03□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Rsph6aQ8CDR2 708 aa13.02□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Nup88Q8CEC0 753 aaKnown RBP13.02□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Anp32eP97822 260 aaKnown RBP13.02□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Iqca1Q9CUL5 857 aa13.02□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Ccdc39Q9D5Y1 937 aa13.02□□□□□ -0.32
Scn8a-203ENSMUST00000108908 Map3k2Q61083 619 aa13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Atp7aQ64430 1491 aa13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Eif5P59325 429 aaKnown RBP13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Stim1P70302 685 aa13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 AcrbpQ3V140 540 aa13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Tbc1d7Q9D0K0 293 aa13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Ncoa3O09000 1398 aa13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Klhdc4Q921I2 584 aa13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Wdhd1P59328 1117 aa13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 ImmtQ8CAQ8 757 aaKnown RBP13.02□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Kdm5bQ80Y84 1544 aa13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Abcd1P48410 736 aa13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Irf9Q61179 399 aa13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Pik3c2gO70167 1506 aa13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Fam13bQ8K2H3 851 aa13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Mum1Q6DID5 682 aa13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Rbm10Q99KG3 930 aaKnown RBP13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 CastP51125 788 aa13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Rai14Q9EP71 979 aaKnown RBP13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Bag3Q9JLV1 577 aaKnown RBP13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Adcy10Q8C0T9 1614 aa13.01□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Med4Q9CQA5 270 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Cfap58B2RW38 873 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Farp2Q91VS8 1065 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Kiaa0753Q6A000 959 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 ZwintQ9CQU5 252 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Il1rapl2Q9ERS6 686 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Slc13a4Q8BZ82 625 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Ripk4Q9ERK0 786 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Chpf2Q3UU43 768 aa13□□□□□ -0.33
Scn8a-203ENSMUST00000108908 Cep55Q8BT07 462 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms