RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Bag1Q60739 355 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Cdan1Q8CC12 1239 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Cc2d2aQ8CFW7 1633 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 AidaQ8C4Q6 305 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Rapgef3Q8VCC8 918 aa12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Epb41l2O70318 988 aaKnown RBP12.2□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Tnni2P13412 182 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 VeztQ3ZK22 780 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 CenphQ9QYM8 241 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Hoxa7P02830 229 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Map3k13Q1HKZ5 959 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Spata24Q6P926 205 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Srgap3Q812A2 1099 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Pank1Q8K4K6 548 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Ctage5Q8R311 779 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Nsfl1cQ9CZ44 370 aaKnown RBP12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Ak7Q9D2H2 614 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Cwc27Q3TKY6 469 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Slf2Q6P9P0 1278 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Rufy2Q8R4C2 606 aa12.19□□□□□ -0.46
Scn9a-201ENSMUST00000100063 ItpripQ3TNL8 555 aa12.18□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Exoc5Q3TPX4 708 aa12.18□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Fam13aQ8BGI4 693 aa12.18□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Tsg101Q61187 391 aa12.18□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Cfap45Q9D9U9 551 aa12.18□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Rrs1Q9CYH6 365 aaKnown RBP12.18□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Gcc1Q9D4H2 778 aa12.18□□□□□ -0.46
Scn9a-201ENSMUST00000100063 ScaperF8VQ70 1398 aaKnown RBP12.17□□□□□ -0.46
Scn9a-201ENSMUST00000100063 CadpsQ80TJ1 1355 aa12.17□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Map9Q3TRR0 646 aa12.17□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Kiaa1524Q8BWY9 907 aa12.17□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Pms1Q8K119 917 aa12.17□□□□□ -0.46
Scn9a-201ENSMUST00000100063 IbtkQ6ZPR6 1352 aaKnown RBP12.17□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Ces1hD3Z298 562 aa12.17□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Riok3Q9DBU3 519 aaKnown RBP12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Fbf1A2A870 1173 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Rnf214Q8BFU3 668 aaKnown RBP12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Jdp2P97875 163 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Nat10Q8K224 1024 aaKnown RBP12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Hdac9Q99N13 588 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Rab3gap2Q8BMG7 1366 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Ddx23D3Z0M9 819 aaKnown RBP12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Ift74Q8BKE9 600 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Cc2d1bQ8BRN9 848 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Crybg2B7ZCC2 1516 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 NapbP28663 298 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Smtnl1Q99LM3 459 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Skida1Q80YR3 822 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Slc14a2Q8R4T9 930 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Cfap53Q9D439 514 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 GnpatP98192 678 aa12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Knop1Q9Z2Q2 478 aaKnown RBP12.16□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Snx25Q3ZT31 840 aa12.15□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Nol11Q8BJW5 723 aaKnown RBP12.15□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Ncf1Q09014 390 aa12.15□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Hook3Q8BUK6 718 aa12.15□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Smarcad1Q04692 1021 aa12.15□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Rab3il1Q8VDV3 383 aa12.15□□□□□ -0.46
Scn9a-201ENSMUST00000100063 Fbxo2Q80UW2 297 aa12.15□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Mrc2Q64449 1479 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Zfp42P22227 288 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Bag4Q8CI61 457 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 TnmdQ9EP64 317 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 AdnpQ9Z103 1108 aaKnown RBP12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ift140E9PY46 1464 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Hs6st3Q9QYK4 470 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Plekhg5Q66T02 1073 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Zcwpw1Q6IR42 630 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Svs3aF2Z472 265 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Smarcc1P97496 1104 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 TrhQ62361 256 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ctnna2Q61301 953 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ppip5k2Q6ZQB6 1129 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Krt85Q9Z2T6 507 aa12.14□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Palm3A2TJV2 734 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Q3UJC8 639 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Secisbp2lQ6A098 1086 aaKnown RBP12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Gle1Q8R322 699 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Cdkn1cP49919 348 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Rnf41Q8BH75 317 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ankrd36D3Z4K0 1415 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Cep57l1Q8VDS7 400 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ddx46Q569Z5 1032 aaKnown RBP12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 NsmfQ99NF2 532 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Top2aQ01320 1528 aaKnown RBP12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 L1td1Q587J6 782 aaKnown RBP12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Tmx4Q8C0L0 335 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 IncenpQ9WU62 880 aa12.13□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Glg1Q61543 1175 aaKnown RBP12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Cyp2ab1S4R196 498 aa12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Efcab5A0JP43 1406 aa12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Ggnbp2Q5SV77 696 aa12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Lamb3Q61087 1168 aa12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Cnnm3Q32NY4 713 aa12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 KarsQ99MN1 595 aaKnown RBP12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Mum1Q6DID5 682 aa12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Pdcd6ipQ9WU78 869 aaKnown RBP12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Irgm2A0A140LIF8 407 aa12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 Nfxl1E9Q8I7 918 aaKnown RBP12.12□□□□□ -0.47
Scn9a-201ENSMUST00000100063 CastP51125 788 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms