RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Map4k4P97820 1233 aaKnown RBP11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Spag5Q7TME2 1165 aa11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 SufuQ9Z0P7 484 aa11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Ubn2Q80WC1 1314 aa11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Atp2b1G5E829 1220 aa11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Cnga1P29974 684 aa11.61□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Adgrb2Q8CGM1 1561 aa11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Cfap73J3QPZ5 306 aa11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Smarce1O54941 411 aaKnown RBP11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 MecomP14404 1042 aa11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Nap1l1P28656 391 aaKnown RBP11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Dixdc1Q80Y83 711 aa11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Cchcr1Q8K2I2 770 aa11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 C1qtnf12Q8R2Z0 308 aa11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Odf2lQ9D478 642 aa11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 TfrcQ62351 763 aaKnown RBP11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Dydc1Q9D9T0 175 aa11.6□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 AnkarA2RT91 1465 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Ankrd35E9Q9D8 996 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Recql4Q75NR7 1216 aaKnown RBP11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 CenppQ9CZ92 286 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Gpatch8A2A6A1 1505 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Map2k1P31938 393 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Ppip5k2Q6ZQB6 1129 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Frmd3Q8BHD4 595 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Nlrp6Q91WS2 869 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Dpf1Q9QX66 387 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Pds5bQ4VA53 1446 aaKnown RBP11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Gm6588E9Q3K0 461 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Ap5z1Q3U829 807 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Med4Q9CQA5 270 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 AdnpQ9Z103 1108 aaKnown RBP11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Letm1Q9Z2I0 738 aa11.59□□□□□ -0.55
Hmgb1-201ENSMUST00000085546 Brpf3B2KF05 1204 aaKnown RBP11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Zkscan7E9PVW1 718 aa11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Klra5Q60652 266 aa11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ppp1r3fQ9JIG4 799 aa11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Zranb2Q9R020 330 aaKnown RBP11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Lrriq1Q0P5X1 1673 aa11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 AW822073A0A0N4SUK1 652 aa11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 RargP18911 458 aaKnown RBP11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ppp6r1Q7TSI3 856 aa11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 CrebrfQ8CDG5 640 aaKnown RBP11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Rrp7aQ9D1C9 280 aaKnown RBP11.58□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Atp6v1aP50516 617 aaKnown RBP11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Utp14aQ640M1 767 aaKnown RBP11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Paf1Q8K2T8 535 aa11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Polr3glQ8R0C0 218 aa11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Casz1Q9CWL2 1761 aa11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Rad50P70388 1312 aa11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Tmco5bQ80X59 307 aa11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Mrps27Q8BK72 415 aaKnown RBP11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Atxn3Q9CVD2 355 aa11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 PdiltQ9DAN1 588 aa11.57□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Calcoco2A2A6M5 331 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Vwa3bJ9JI28 736 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Klra3Q64329 266 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Igsf3Q6ZQA6 1194 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Pnpla2Q8BJ56 486 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 GzmnQ920S1 248 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Kdm6bQ5NCY0 1641 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ppip5k1A2ARP1 1436 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 AatkQ80YE4 1365 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ranbp1P34022 203 aaKnown RBP11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Slc7a3P70423 618 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Tpm4Q6IRU2 248 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ccar2Q8VDP4 922 aaKnown RBP11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Trim66Q924W6 1242 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Rusc2Q80U22 1514 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 AI481877A2ALV5 1481 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Pola1P33609 1465 aa11.56□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ccdc141E9Q8Q6 1531 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Exoc6bA6H5Z3 810 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Klra9Q2TJJ8 266 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Stk11ipQ3TAA7 1072 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ppm1eQ80TL0 749 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Cct8l1Q80YT3 562 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Add3Q9QYB5 706 aaKnown RBP11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Klra10Q9R1G6 266 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 IbtkQ6ZPR6 1352 aaKnown RBP11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Slc4a1apE9PX68 744 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ccdc146E9Q9F7 977 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Surf1P09925 306 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Mtx1P47802 317 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Aplp1Q03157 653 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Map9Q3TRR0 646 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Zrsr2Q62377 462 aaKnown RBP11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 NexnQ7TPW1 607 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 St18Q80TY4 1045 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ttc27Q8CD92 847 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Hmgn5Q9JL35 406 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Rtf1A2AQ19 715 aaKnown RBP11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Usp25P57080 1055 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 FntaQ61239 377 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Zscan22Q8BGS5 496 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ppp6r3Q922D4 844 aa11.55□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 PogzQ8BZH4 1409 aaKnown RBP11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Btn2a2A4QPC6 514 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Cfap58B2RW38 873 aa11.54□□□□□ -0.56
Hmgb1-201ENSMUST00000085546 Ube2hP62257 183 aa11.54□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms