RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	FGF1	P05230	155 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	HLA-DPA1	P20036	260 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	CD247	P20963	164 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	KCNK10	P57789	538 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	IRF5	Q13568	498 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	RAB39A	Q14964	217 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	AAK1	Q2M2I8	961 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	TYSND1	Q2T9J0	566 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	COQ5	Q5HYK3	327 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	CFAP52	Q8N1V2	620 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	DHRSX	Q8N5I4	330 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	ATAD1	Q8NBU5	361 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	TNIP2	Q8NFZ5	429 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	B3GALT6	Q96L58	329 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	CDK15	Q96Q40	435 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	ZBED2	Q9BTP6	218 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	SEZ6L	Q9BYH1	1024 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	DERL2	Q9GZP9	239 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	POLR1B	Q9H9Y6	1135 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	SMPD3	Q9NY59	655 aa	Predicted RBP	13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	GMEB1	Q9Y692	573 aa		13.72	□□□□□ -0.21
PHGDH-233	ENST00000642021	LCHN	A4D1U4	455 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	DRGX	A6NNA5	263 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021		H0Y858	1186 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021		H3BMQ9	156 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	SLC22A3	O75751	556 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	TYMP	P19971	482 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	POLR2I	P36954	125 aa	Known RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	RPS9	P46781	194 aa	Known RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	RGR	P47804	291 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	HK3	P52790	923 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	NUP107	P57740	925 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	OR4D2	P58180	307 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	FOXM1	Q08050	763 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	DSC3	Q14574	896 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	C16orf72	Q14CZ0	275 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	XKR7	Q5GH72	579 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	TMEM26	Q6ZUK4	368 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	RALGPS2	Q86X27	583 aa	Predicted RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	FNDC8	Q8TC99	324 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	BTN2A3P	Q96KV6	586 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	COG8	Q96MW5	612 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	HIPK3	Q9H422	1215 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	TLR9	Q9NR96	1032 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	ANAPC2	Q9UJX6	822 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021		A0A0U1RQS6	177 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021		A0A1W2PPW3	197 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	CCDC154	A6NI56	674 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	PRAMEF11	O60813	436 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	EED	O75530	441 aa	Known RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	OGN	P20774	298 aa	Known RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	CAPG	P40121	348 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	ZNF235	Q14590	738 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	PTPRR	Q15256	657 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	FGD3	Q5JSP0	725 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	HABP4	Q5JVS0	413 aa	Known RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	SLC2A7	Q6PXP3	512 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	ABRAXAS1	Q6UWZ7	409 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	PATL1	Q86TB9	770 aa	Known RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	BBS5	Q8N3I7	341 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	TMEM199	Q8N511	208 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	PAPD5	Q8NDF8	572 aa	Known RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	MDGA1	Q8NFP4	955 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	OR4K2	Q8NGD2	314 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	PROKR1	Q8TCW9	393 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	SNRNP27	Q8WVK2	155 aa	Known RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	C17orf50	Q8WW18	174 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	TRIB3	Q96RU7	358 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	CYP2S1	Q96SQ9	504 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	CHID1	Q9BWS9	393 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	SYTL2	Q9HCH5	934 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	TAS2R13	Q9NYV9	303 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	EVL	Q9UI08	416 aa	Predicted RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	PCTP	Q9UKL6	214 aa		13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	FAF1	Q9UNN5	650 aa	Predicted RBP	13.71	□□□□□ -0.21
PHGDH-233	ENST00000642021	BTN3A1	O00481	513 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	OR1I1	O60431	355 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	POLR2J	P52435	117 aa	Known RBP	13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	ZIK1	Q3SY52	487 aa	Predicted RBP	13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	NADSYN1	Q6IA69	706 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	TMEM214	Q6NUQ4	689 aa	Known RBP	13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021		Q6ZSR9	355 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	KCTD8	Q6ZWB6	473 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	SPATA19	Q7Z5L4	167 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	PIANP	Q8IYJ0	282 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	ATP6V0D2	Q8N8Y2	350 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	PEX13	Q92968	403 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	VPS50	Q96JG6	964 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	EXOC2	Q96KP1	924 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	HBEGF	Q99075	208 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	MTG1	Q9BT17	334 aa	Predicted RBP	13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	HGH1	Q9BTY7	390 aa		13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	TDRKH	Q9Y2W6	561 aa	Known RBP	13.71	□□□□□ -0.22
PHGDH-233	ENST00000642021	SLC12A8	A0AV02	714 aa		13.7	□□□□□ -0.22
PHGDH-233	ENST00000642021	ESRRB	O95718	433 aa		13.7	□□□□□ -0.22
PHGDH-233	ENST00000642021	TSPAN12	O95859	305 aa		13.7	□□□□□ -0.22
PHGDH-233	ENST00000642021	EPO	P01588	193 aa		13.7	□□□□□ -0.22
PHGDH-233	ENST00000642021	HOXB8	P17481	243 aa	Predicted RBP	13.7	□□□□□ -0.22
PHGDH-233	ENST00000642021	SELPLG	Q14242	412 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms