RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SEC14L2O76054 403 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 BAG4O95429 457 aaKnown RBP4.5□□□□□ -1.69
CCDC7-216ENST00000640058 KRT19P08727 400 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 SPARCP09486 303 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 CHRNB4P30926 498 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 PBX3P40426 434 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 PMP22Q01453 160 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 MBTD1Q05BQ5 628 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 ACVR2BQ13705 512 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 FCN2Q15485 313 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 CCNG2Q16589 344 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 C15orf39Q6ZRI6 1047 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 ANO5Q75V66 913 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 R3HCC1LQ7Z5L2 792 aaKnown RBP4.5□□□□□ -1.69
CCDC7-216ENST00000640058 ZNF485Q8NCK3 441 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 FCAMRQ8WWV6 532 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 LGALS12Q96DT0 336 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 BICC1Q9H694 974 aaKnown RBP4.5□□□□□ -1.69
CCDC7-216ENST00000640058 PDP2Q9P2J9 529 aa4.5□□□□□ -1.69
CCDC7-216ENST00000640058 A0A1B0GU03 582 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 A0A1W2PPH5 198 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 C5orf60A6NFR6 353 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 PCDH7O60245 1069 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 JRKO75564 520 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 CAVIN2O95810 425 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 NR3C1P04150 777 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 ATP1A3P13637 1013 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 CSF2RAP15509 400 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 RGS2P41220 211 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 DRG2P55039 364 aaKnown RBP4.49□□□□□ -1.69
CCDC7-216ENST00000640058 PPIGQ13427 754 aaKnown RBP eCLIP4.49□□□□□ -1.69
CCDC7-216ENST00000640058 PNLIPRP3Q17RR3 467 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 ZNF805Q5CZA5 627 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 NSUN5P2Q63ZY6 315 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 KRTAP7-1Q8IUC3 87 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 HM13Q8TCT9 377 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 ARHGEF26Q96DR7 871 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 PERPQ96FX8 193 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 C17orf77Q96MU5 243 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 STRA6Q9BX79 667 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 POLR1BQ9H9Y6 1135 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 UBN1Q9NPG3 1134 aa4.49□□□□□ -1.69
CCDC7-216ENST00000640058 R3HDM2Q9Y2K5 976 aaKnown RBP4.49□□□□□ -1.69
CCDC7-216ENST00000640058 IGKV3D-15A0A087WSY6 115 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 A0A1W2PRG0 241 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 SYNCRIPO60506 623 aaKnown RBP4.48□□□□□ -1.69
CCDC7-216ENST00000640058 ICAM1P05362 532 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 ZNF23P17027 643 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 MCCP23508 829 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 PRCPP42785 496 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 RPL7AP62424 266 aaKnown RBP4.48□□□□□ -1.69
CCDC7-216ENST00000640058 TMEM95Q3KNT9 176 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 TECRLQ5HYJ1 363 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 LRIF1Q5T3J3 769 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 PLXDC2Q6UX71 529 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 RBMS3Q6XE24 437 aaKnown RBP4.48□□□□□ -1.69
CCDC7-216ENST00000640058 TRPT1Q86TN4 253 aaKnown RBP4.48□□□□□ -1.69
CCDC7-216ENST00000640058 LONP2Q86WA8 852 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 GBGT1Q8N5D6 347 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 TMEM116Q8NCL8 245 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 FAM149B1Q96BN6 582 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 WDFY2Q96P53 400 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 SEMA3CQ99985 751 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 PSD2Q9BQI7 771 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 SIL1Q9H173 461 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 PREBQ9HCU5 417 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 PTTG2Q9NZH5 202 aa4.48□□□□□ -1.69
CCDC7-216ENST00000640058 A0A1W2PQF6 199 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 HHLA1C9JL84 531 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 SLC25A12O75746 678 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 WISP2O76076 250 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 AGR2O95994 175 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 TAF6P49848 677 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 MLLT10P55197 1068 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 CASP6P55212 293 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 CD81P60033 236 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 CSTF3Q12996 717 aaKnown RBP4.47□□□□□ -1.69
CCDC7-216ENST00000640058 CYP20A1Q6UW02 462 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 SEPT14Q6ZU15 432 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 Q75L30 129 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 APLFQ8IW19 511 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-216ENST00000640058 PM20D2Q8IYS1 436 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 RASGEF1CQ8N431 466 aa4.47□□□□□ -1.69
CCDC7-216ENST00000640058 ADAD2Q8NCV1 583 aaKnown RBP4.47□□□□□ -1.69
CCDC7-216ENST00000640058 CWC15Q9P013 229 aaKnown RBP4.47□□□□□ -1.69
CCDC7-216ENST00000640058 DUXAA6NLW8 204 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 PDE9AO76083 593 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 IPO7O95373 1038 aaKnown RBP4.46□□□□□ -1.7
CCDC7-216ENST00000640058 TBCEQ15813 527 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-216ENST00000640058 ZC2HC1CQ53FD0 456 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-216ENST00000640058 ZNF772Q68DY9 489 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-216ENST00000640058 LCN10Q6JVE6 187 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 FAM53AQ6NSI3 398 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-216ENST00000640058 ZNF497Q6ZNH5 498 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 CCDC190Q86UF4 302 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 EMC1Q8N766 993 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 TSPYL6Q8N831 410 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 MORC4Q8TE76 937 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 PPP4R1Q8TF05 950 aa4.46□□□□□ -1.7
CCDC7-216ENST00000640058 TAF15Q92804 592 aaKnown RBP eCLIP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms