RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 PFDN1O60925 122 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 LDLRP01130 860 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 CREB1P16220 341 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 AKT2P31751 481 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 VIPR2P41587 438 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 HCAR3P49019 387 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 DHPSP49366 369 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-215ENST00000639145 PEX6Q13608 980 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 FAM72AQ5TYM5 149 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 KIAA0930Q6ICG6 404 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-215ENST00000639145 FAM72DQ6L9T8 149 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 FAM72BQ86X60 149 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 KRT73Q86Y46 540 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 PRSS58Q8IYP2 241 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 C12orf66Q96MD2 445 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 GJD2Q9UKL4 321 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 SLC28A1O00337 649 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 AXIN1O15169 862 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 CRHR1P34998 444 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 UBE3AQ05086 875 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ALYREFQ86V81 257 aaKnown RBP13.51□□□□□ -0.25
SCARB2-215ENST00000639145 AMZ2Q86W34 360 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 WDTC1Q8N5D0 677 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ZFP28Q8NHY6 868 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 THAP11Q96EK4 314 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 MMP20O60882 483 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 NR2F1P10589 423 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 CHIT1Q13231 466 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ZNHIT3Q15649 155 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-215ENST00000639145 PLEKHG6Q3KR16 790 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 MINDY4Q4G0A6 757 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 MARCH8Q5T0T0 291 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ICE2Q659A1 982 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ADGRD1Q6QNK2 874 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 LRRTM3Q86VH5 581 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ZC3H3Q8IXZ2 948 aaKnown RBP13.51□□□□□ -0.25
SCARB2-215ENST00000639145 FSTL5Q8N475 847 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-215ENST00000639145 RAD51AP1Q96B01 352 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ZNF599Q96NL3 588 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 OR52E6Q96RD3 313 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 NDEL1Q9GZM8 345 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 WDR26Q9H7D7 661 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 IL36AQ9UHA7 158 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 CYTH4Q9UIA0 394 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 LEF1Q9UJU2 399 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-215ENST00000639145 KCTD3Q9Y597 815 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ZNF840PA6NDX5 716 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 C2orf71A6NGG8 1288 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 RHPN2P1A8MT19 583 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ANKRD66B4E2M5 251 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 C9JVG2 144 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 COL6A2P12110 1019 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 MYLK3Q32MK0 819 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 ITPRIPL2Q3MIP1 535 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 SIRPB2Q5JXA9 342 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 IRGCQ6NXR0 463 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 GATAD2AQ86YP4 633 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 PYCR2Q96C36 320 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 RCN3Q96D15 328 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 SLC38A3Q99624 504 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 TMLHEQ9NVH6 421 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 COLEC10Q9Y6Z7 277 aa13.51□□□□□ -0.25
SCARB2-215ENST00000639145 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 NWD2Q9ULI1 1742 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 TNRC6CQ9HCJ0 1690 aaKnown RBP13.5□□□□□ -0.25
SCARB2-215ENST00000639145 NEMP2A6NFY4 417 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 CHRNA6Q15825 494 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 C16orf62Q7Z3J2 963 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 DEFB119Q8N690 84 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 KBTBD7Q8WVZ9 684 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 CENPTQ96BT3 561 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 MCMBPQ9BTE3 642 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 OSER1Q9NX31 292 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 EIF2B4Q9UI10 523 aaKnown RBP13.5□□□□□ -0.25
SCARB2-215ENST00000639145 PHF24Q9UPV7 400 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 RFXANKO14593 260 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 EDF1O60869 148 aaKnown RBP13.5□□□□□ -0.25
SCARB2-215ENST00000639145 DLDP09622 509 aaKnown RBP13.5□□□□□ -0.25
SCARB2-215ENST00000639145 ZCCHC18P0CG32 403 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 COX4I1P13073 169 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 STK19P49842 368 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-215ENST00000639145 TMED1Q13445 227 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 CYP1B1Q16678 543 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 AMZ1Q400G9 498 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 PLD3Q8IV08 490 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 DCAF4L2Q8NA75 395 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 ACTRT2Q8TDY3 377 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 OLFM3Q96PB7 478 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 BDH2Q9BUT1 245 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 GATA5Q9BWX5 397 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-215ENST00000639145 ZNF358Q9NW07 568 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 HCSTQ9UBK5 93 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 MRPS33Q9Y291 106 aaKnown RBP13.5□□□□□ -0.25
SCARB2-215ENST00000639145 TJP1Q07157 1748 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 FKBP6O75344 327 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 GNPDA1P46926 289 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 GPAT3Q53EU6 434 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 PLEKHG4Q58EX7 1191 aa13.5□□□□□ -0.25
SCARB2-215ENST00000639145 C22orf39Q6P5X5 142 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms