RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 H0YAE9 185 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 UPK1AO00322 258 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 KERAO60938 352 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 SLC22A3O75751 556 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 SEC14L2O76054 403 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 HTR1EP28566 365 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 SUOXP51687 545 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 TMBIM6P55061 237 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 MLLT6P55198 1093 aaPredicted RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 PHEXP78562 749 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 BFSP2Q13515 415 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 TSNQ15631 228 aaKnown RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 ALFQ53S48 1182 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 HABP4Q5JVS0 413 aaKnown RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 LDLRAP1Q5SW96 308 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 BROXQ5VW32 411 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 ANKS6Q68DC2 871 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 GLYATQ6IB77 296 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 SLC2A7Q6PXP3 512 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 PAQR3Q6TCH7 311 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 SFRP1Q8N474 314 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 DCBLD1Q8N8Z6 715 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 TSPEARQ8WU66 669 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 TMBIM1Q969X1 311 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 CNDP2Q96KP4 475 aaKnown RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 NSMCE2Q96MF7 247 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 AARSD1Q9BTE6 412 aaKnown RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 TRIM62Q9BVG3 475 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 ADNPQ9H2P0 1102 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 LTB4R2Q9NPC1 389 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 A0A1W2PQH9 124 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 IQCA1LA6NCM1 817 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 ARL5CA6NH57 179 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 CDC7O00311 574 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 ENPP3O14638 875 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 VPS4BO75351 444 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 ECI2O75521 394 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 ODC1P11926 461 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 JUNBP17275 347 aaPredicted RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 RAB15P59190 212 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 EMX2Q04743 252 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 YWHAHQ04917 246 aaPredicted RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 SELPLGQ14242 412 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 GALNT3Q14435 633 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 MRNIPQ6NTE8 343 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 BEND5Q7L4P6 421 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 RIMKLAQ8IXN7 391 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 CLEC4FQ8N1N0 589 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 PDZD8Q8NEN9 1154 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 CHPT1Q8WUD6 406 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 RSPH1Q8WYR4 309 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 ACBD6Q9BR61 282 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 EVLQ9UI08 416 aaPredicted RBP10.83□□□□□ -0.68
SNIP1-204ENST00000638725 GNPTGQ9UJJ9 305 aa10.83□□□□□ -0.68
SNIP1-204ENST00000638725 WASH4PA8MWX3 477 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 CFAP99D6REC4 459 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PDHXO00330 501 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 SNX2O60749 519 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ABCB7O75027 752 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 SULT1C4O75897 302 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 RHOBTB1O94844 696 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 RPS17P08708 135 aaKnown RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 NR4A1P22736 598 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ALDH3A2P51648 485 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ACVR1Q04771 509 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 DAG1Q14118 895 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 UPP1Q16831 310 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PLA2G4EQ3MJ16 856 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PDCD4Q53EL6 469 aaKnown RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 XKR7Q5GH72 579 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 TLK2Q86UE8 772 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 STK32CQ86UX6 486 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PROSER1Q86XN7 944 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 UMODL1-AS1Q8N2C9 162 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 NAT16Q8N8M0 369 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 SLC22A17Q8WUG5 538 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 NUDT8Q8WV74 236 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 TRUB1Q8WWH5 349 aaKnown RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 KIAA1191Q96A73 305 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ZNF599Q96NL3 588 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PKMYT1Q99640 499 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 BRINP2Q9C0B6 783 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 TRNAU1APQ9NX07 287 aaKnown RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 GMIPQ9P107 970 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 LOC285095A0A1B0GVY8 99 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 NPEPPSL1A6NEC2 478 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 SOBPA7XYQ1 873 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ADAM23O75077 832 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 COQ9O75208 318 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 B3GAT3O94766 335 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ALPLP05186 524 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ENO2P09104 434 aaPredicted RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 THRBP10828 461 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 CDH1P12830 882 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 FUT4P22083 530 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 FMO4P31512 558 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 GRIK1P39086 918 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 MTPNP58546 118 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 BEX3Q00994 111 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms