RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 GPR89BP0CG08 455 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 ZFXP17010 805 aaPredicted RBP18.23■□□□□ 0.51
CLN6-220ENST00000637450 UBE2IP63279 158 aaKnown RBP18.23■□□□□ 0.51
CLN6-220ENST00000637450 TRIM14Q14142 442 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 SLC14A2Q15849 920 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 LRRC38Q5VT99 294 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 ALS2CLQ60I27 953 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 PDPK2PQ6A1A2 396 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 NPNTQ6UXI9 565 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 ADGRG6Q86SQ4 1221 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 AVL9Q8NBF6 648 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 PLEKHG4BQ96PX9 1271 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 CTRCQ99895 268 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 ZPBPQ9BS86 351 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 TBC1D10AQ9BXI6 508 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 BRD8Q9H0E9 1235 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 UCK1Q9HA47 277 aa18.23■□□□□ 0.51
CLN6-220ENST00000637450 ZNHIT6Q9NWK9 470 aaKnown RBP18.23■□□□□ 0.51
CLN6-220ENST00000637450 NFKBIL1Q9UBC1 381 aaPredicted RBP18.23■□□□□ 0.51
CLN6-220ENST00000637450 LILRA5A6NI73 299 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 PPP1R12AO14974 1030 aaPredicted RBP18.22■□□□□ 0.51
CLN6-220ENST00000637450 CAPN5O15484 640 aaPredicted RBP18.22■□□□□ 0.51
CLN6-220ENST00000637450 XRCC1P18887 633 aaPredicted RBP18.22■□□□□ 0.51
CLN6-220ENST00000637450 MAPK9P45984 424 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 NFKB2Q00653 900 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 CEACAM20Q6UY09 585 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 RHOT2Q8IXI1 618 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 GLYATL1Q969I3 302 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 CHP1Q99653 195 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 GPR63Q9BZJ6 419 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 SLC25A18Q9H1K4 315 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 SCHIP1Q9P0W5 487 aaPredicted RBP18.22■□□□□ 0.51
CLN6-220ENST00000637450 SLC23A2Q9UGH3 650 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 ZNF711Q9Y462 761 aa18.22■□□□□ 0.51
CLN6-220ENST00000637450 SUV39H1O43463 412 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 MT-CYBP00156 380 aaPredicted RBP18.21■□□□□ 0.51
CLN6-220ENST00000637450 BPIP17213 487 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 MAP4P27816 1152 aaKnown RBP18.21■□□□□ 0.51
CLN6-220ENST00000637450 PCSK7Q16549 785 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 TEX44Q53QW1 395 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 BORAQ6PGQ7 559 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 B4GALNT4Q76KP1 1039 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 RFX6Q8HWS3 928 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 PLXDC1Q8IUK5 500 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 NLGN4XQ8N0W4 816 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 NLGN4YQ8NFZ3 816 aaPredicted RBP18.21■□□□□ 0.51
CLN6-220ENST00000637450 SPATA22Q8NHS9 363 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 RNF25Q96BH1 459 aaPredicted RBP18.21■□□□□ 0.51
CLN6-220ENST00000637450 SLC45A3Q96JT2 553 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 CCDC42Q96M95 316 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 ADNPQ9H2P0 1102 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 NHEJ1Q9H9Q4 299 aaPredicted RBP18.21■□□□□ 0.51
CLN6-220ENST00000637450 GLOD4Q9HC38 313 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 APMAPQ9HDC9 416 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 SPTLC3Q9NUV7 552 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 KLHL3Q9UH77 587 aa18.21■□□□□ 0.51
CLN6-220ENST00000637450 PRR19A6NJB7 356 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 ZNF891A8MT65 544 aaPredicted RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 TERTO14746 1132 aaKnown RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 KMOO15229 486 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 CBFA2T2O43439 604 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 PPFIA2O75334 1257 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 NDST3O95803 873 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 KRT1P04264 644 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 ZNF7P17097 686 aaPredicted RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 SLC19A1P41440 591 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 SLC1A1P43005 524 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 CSRP3P50461 194 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 CRTC3Q6UUV7 619 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 ATG14Q6ZNE5 492 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 TMEM26Q6ZUK4 368 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 TIPARPQ7Z3E1 657 aaKnown RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 RHOT1Q8IXI2 618 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 TEKT5Q96M29 485 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 SRPK1Q96SB4 655 aaKnown RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 OSGEPL1Q9H4B0 414 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 ABHD10Q9NUJ1 306 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 DDX56Q9NY93 547 aaKnown RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 OGFRQ9NZT2 677 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 ZNF624Q9P2J8 865 aaPredicted RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 IL17BQ9UHF5 180 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 TMEM184BQ9Y519 407 aaPredicted RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 SPO11Q9Y5K1 396 aa18.2■□□□□ 0.5
CLN6-220ENST00000637450 MN1Q10571 1320 aaPredicted RBP18.2■□□□□ 0.5
CLN6-220ENST00000637450 ZFC3H1O60293 1989 aaKnown RBP18.19■□□□□ 0.5
CLN6-220ENST00000637450 LOC101059948A0A1B0GTJ6 334 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 AURKAO14965 403 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 POLR1CO15160 346 aaPredicted RBP18.19■□□□□ 0.5
CLN6-220ENST00000637450 VEGFDO43915 354 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 SLC4A1P02730 911 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 C9P02748 559 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 ANKRD34CP0C6C1 535 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 PTPN3P26045 913 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 DYNLT1P63172 113 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 TCEAL1Q15170 157 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 INSCQ1MX18 579 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 CCDC70Q6NSX1 233 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 MFSD7Q6UXD7 560 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 LRRTM4Q86VH4 590 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms