RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 KCNK4Q9NYG8 393 aa13.65□□□□□ -0.22
PNKP-228ENST00000637325 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
PNKP-228ENST00000637325 AKAP7Q9P0M2 348 aaPredicted RBP13.65□□□□□ -0.22
PNKP-228ENST00000637325 GUCA1BQ9UMX6 200 aa13.65□□□□□ -0.22
PNKP-228ENST00000637325 PKP3Q9Y446 797 aa13.65□□□□□ -0.22
PNKP-228ENST00000637325 PCYT1BQ9Y5K3 369 aaPredicted RBP13.65□□□□□ -0.22
PNKP-228ENST00000637325 A0A1W2PNU3 283 aaPredicted RBP13.64□□□□□ -0.23
PNKP-228ENST00000637325 C2orf81A6NN90 581 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 PLD2O14939 933 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 KMOO15229 486 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 PPM1DO15297 605 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 STX7O15400 261 aaKnown RBP13.64□□□□□ -0.23
PNKP-228ENST00000637325 DDX3YO15523 660 aaKnown RBP13.64□□□□□ -0.23
PNKP-228ENST00000637325 KRT86O43790 486 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 VEGFDO43915 354 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 MTX2O75431 263 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 CDK14O94921 469 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 JMJD7P0C870 316 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 MLLT3P42568 568 aaPredicted RBP13.64□□□□□ -0.23
PNKP-228ENST00000637325 CLPPQ16740 277 aaPredicted RBP13.64□□□□□ -0.23
PNKP-228ENST00000637325 INSCQ1MX18 579 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 PLA2G4EQ3MJ16 856 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 BROXQ5VW32 411 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 IGF2-ASQ6U949 168 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 FAM151BQ6UXP7 276 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 SLC9B2Q86UD5 537 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 LRRTM4Q86VH4 590 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 JAMLQ86YT9 394 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 BRSK1Q8TDC3 778 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 SLC37A2Q8TED4 501 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 KCNE4Q8WWG9 221 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
PNKP-228ENST00000637325 TTC25Q96NG3 672 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 VPS35Q96QK1 796 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 APOL2Q9BQE5 337 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 RDH14Q9HBH5 336 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 KLC4Q9NSK0 619 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 IL17CQ9P0M4 197 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 TBC1D29Q9UFV1 150 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 LOXL2Q9Y4K0 774 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 CAPN6Q9Y6Q1 641 aa13.64□□□□□ -0.23
PNKP-228ENST00000637325 GLYATL1P3A0A0U1RQE8 302 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 PMS2P1A4D2B8 440 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 OR5K4A6NMS3 321 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 ARHGAP6O43182 974 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 BUD23O43709 281 aaKnown RBP13.63□□□□□ -0.23
PNKP-228ENST00000637325 PPFIA2O75334 1257 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 ITGA2BP08514 1039 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A5P35504 534 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 FASLGP48023 281 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 HHEXQ03014 270 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 ZFP36L1Q07352 338 aaKnown RBP13.63□□□□□ -0.23
PNKP-228ENST00000637325 ITGA9Q13797 1035 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 NR1D2Q14995 579 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 CHRNA6Q15825 494 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 ATP13A5Q4VNC0 1218 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 SEL1L2Q5TEA6 688 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 NKAIN2Q5VXU1 208 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 IYDQ6PHW0 289 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 ARHGEF18Q6ZSZ5 1173 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 ZNF761Q86XN6 746 aaPredicted RBP13.63□□□□□ -0.23
PNKP-228ENST00000637325 SPACA3Q8IXA5 215 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 SFRP1Q8N474 314 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 CCDC112Q8NEF3 446 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 TMEM159Q96B96 161 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 SH3KBP1Q96B97 665 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 CCDC97Q96F63 343 aaPredicted RBP13.63□□□□□ -0.23
PNKP-228ENST00000637325 HES6Q96HZ4 224 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 CMKLR1Q99788 373 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 SEMA6CQ9H3T2 930 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 IL26Q9NPH9 171 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.63□□□□□ -0.23
PNKP-228ENST00000637325 PISDQ9UG56 409 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 NBEAQ8NFP9 2946 aa13.63□□□□□ -0.23
PNKP-228ENST00000637325 ZFHX4Q86UP3 3567 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 KIR2DS5A0A0G2JLQ3 304 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 A0A0G2JNG1 304 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 C5orf60A6NFR6 353 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 KIR2DS3K7RE56 304 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 CHUKO15111 745 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 KLK10O43240 276 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A9O60656 530 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 EML2O95834 649 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 F3P13726 295 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 HGFP14210 728 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 ZNF7P17097 686 aaPredicted RBP13.62□□□□□ -0.23
PNKP-228ENST00000637325 VCLP18206 1134 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A6P19224 532 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 LPOP22079 712 aaPredicted RBP13.62□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A1P22309 533 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A4P22310 534 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 CD1CP29017 333 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A3P35503 534 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 CLCNKAP51800 687 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 TMEM115Q12893 351 aaPredicted RBP13.62□□□□□ -0.23
PNKP-228ENST00000637325 NFATC2Q13469 925 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 KIR2DS5Q14953 304 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 TAF1AQ15573 450 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms