RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 RPP40O75818 363 aaKnown RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 PRAMEF12O95522 483 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 LATS1O95835 1130 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 GSTT2P0CG29 244 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 GSTT2BP0CG30 244 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 CTSOP43234 321 aaPredicted RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 ABCE1P61221 599 aaKnown RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 TMTC4Q5T4D3 741 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 VWA5B1Q5TIE3 1220 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 LRRC8EQ6NSJ5 796 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 PSRC1Q6PGN9 363 aaPredicted RBP11.45□□□□□ -0.58
CLN6-217ENST00000636964 OR4L1Q8NH43 312 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 RAB3IL1Q8TBN0 382 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 MYLIPQ8WY64 445 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 ING5Q8WYH8 240 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 VWA7Q9Y334 891 aa11.45□□□□□ -0.58
CLN6-217ENST00000636964 NEMP2A6NFY4 417 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 A8MX80 341 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 PDE5AO76074 875 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 IL1BP01584 269 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 RHOP08100 348 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 PMLP29590 882 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 STK19P49842 368 aaPredicted RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 POU4F1Q01851 419 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 NCEH1Q6PIU2 408 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 KIAA0408Q6ZU52 694 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 TMEM25Q86YD3 366 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 ST13P5Q8NFI4 369 aaPredicted RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 PIWIL2Q8TC59 973 aaKnown RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 STYXQ8WUJ0 223 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 VPS50Q96JG6 964 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 GPR78Q96P69 363 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 GATA5Q9BWX5 397 aaPredicted RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 LINC00597Q9H2U6 94 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 LIN28AQ9H9Z2 209 aaKnown RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 IGSF5Q9NSI5 407 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 STK39Q9UEW8 545 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 INTS6Q9UL03 887 aaKnown RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 LZTS1Q9Y250 596 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 ANKRD6Q9Y2G4 727 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 UBA6A0AVT1 1052 aaPredicted RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 GOLGA8CPA6NN73 597 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 H3BSA7 217 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 GPR39O43194 453 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 TRIM13O60858 407 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 PIGNO95427 931 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 CRTAMO95727 393 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 CHRNGP07510 517 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 ALPIP09923 528 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 RPL5P46777 297 aaKnown RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 EPHB1P54762 984 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 NAGLUP54802 743 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 BTKQ06187 659 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 ARHGAP24Q8N264 748 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 RYBPQ8N488 228 aaPredicted RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 CEP70Q8NHQ1 597 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 FNDC8Q8TC99 324 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
CLN6-217ENST00000636964 PPP4R1Q8TF05 950 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 ABCB8Q9NUT2 735 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 TAGLN3Q9UI15 199 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 IRAK3Q9Y616 596 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 DENND4CQ5VZ89 1909 aa11.44□□□□□ -0.58
CLN6-217ENST00000636964 TXNDC9O14530 226 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 DNAJA2O60884 412 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 FKBP6O75344 327 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 KLHL2O95198 593 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 HSPA4LO95757 839 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ATP6V1B1P15313 513 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 SEMG2Q02383 582 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 MPPE1Q53F39 396 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ZNF549Q6P9A3 640 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 TMEM207Q6UWW9 146 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ZNF783Q6ZMS7 281 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 FAM217AQ8IXS0 508 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ZNF781Q8N8C0 355 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 GOLM1Q8NBJ4 401 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 PPP1R36Q96LQ0 422 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ZSWIM3Q96MP5 696 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 MCOLN1Q9GZU1 580 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 CATSPERZQ9NTU4 200 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 OXSMQ9NWU1 459 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 PRUNE2Q8WUY3 3088 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 DLX3O60479 287 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 MOSPD3O75425 235 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 CIB2O75838 187 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 GRK2P25098 689 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ALDH18A1P54886 795 aaKnown RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 ACVR1Q04771 509 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 TOMM20Q15388 145 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 INO80DQ53TQ3 878 aaPredicted RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 AAGABQ6PD74 315 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 GRASPQ7Z6J2 395 aaPredicted RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 FAM20CQ8IXL6 584 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 CCNYL1Q8N7R7 359 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 DCAF4L2Q8NA75 395 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 HIPK4Q8NE63 616 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 HERVK_113Q902F9 699 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 USP13Q92995 863 aaPredicted RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 ADGRE3Q9BY15 652 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms