RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 CALML5Q9NZT1 146 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 MKLN1Q9UL63 735 aa5.99□□□□□ -1.45
SCN1A-212ENST00000636194 CDK12Q9NYV4 1490 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CYP3A7-CYP3A51PA0A087WV96 503 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 C9P02748 559 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 IDO1P14902 403 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CYP3A7P24462 503 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SEC24CP53992 1094 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 AQP5P55064 265 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LRP8Q14114 963 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 BRMS1LQ5PSV4 323 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ELMO3Q96BJ8 720 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 RHBDF1Q96CC6 855 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CCNL2Q96S94 520 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 VAT1Q99536 393 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 NPLQ9BXD5 320 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SPAG4Q9NPE6 437 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TUBE1Q9UJT0 475 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PADI2Q9Y2J8 665 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 REXO2Q9Y3B8 237 aaKnown RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 EP300Q09472 2414 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ADGRF5Q8IZF2 1346 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 RRAS2P62070 204 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 MTM1Q13496 603 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ARFRP1Q13795 201 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SF1Q15637 639 aaKnown RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 NAIF1Q69YI7 327 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SCIMPQ6UWF3 145 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PTAR1Q7Z6K3 402 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 MCFD2Q8NI22 146 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 MALSU1Q96EH3 234 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 BCAS3Q9H6U6 928 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 POPDC2Q9HBU9 364 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TCF7L1Q9HCS4 588 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SAMHD1Q9Y3Z3 626 aaKnown RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 WDR62O43379 1518 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 H3BQF6 201 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ADH1AP07327 375 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 UQCRC1P31930 480 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 MAP3K8P41279 467 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 GALK2Q01415 458 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ORC1Q13415 861 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PCBP1Q15365 356 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TLR1Q15399 786 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 DLG2Q15700 870 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TMPPEQ6ZT21 453 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 C17orf64Q86WR6 236 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 RAB43Q86YS6 212 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 OR56B2PQ8NGI1 322 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CEP76Q8TAP6 659 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 GCDHQ92947 438 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM143Q96AN5 459 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CLPTM1LQ96KA5 538 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 HSPA12BQ96MM6 686 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SLC38A3Q99624 504 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ZFP14Q9HCL3 533 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM100Q9NV29 134 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.98□□□□□ -1.453e-7■■■□□ 19
SCN1A-212ENST00000636194 RCOR3Q9P2K3 495 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 MRPS23Q9Y3D9 190 aaKnown RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CDC42BPAQ5VT25 1732 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LRRC72A6NJI9 287 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 MUSKO15146 869 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PAEPP09466 180 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 JUNDP17535 347 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LTKP29376 864 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 FMO3P31513 532 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 HNF4AP41235 474 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 GRIK2Q13002 908 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 USP17L6PQ6QN14 398 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ARHGAP36Q6ZRI8 547 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 RIOX2Q8IUF8 465 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 LINC00301Q8NCQ3 95 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 OR10G6Q8NH81 332 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SUN5Q8TC36 379 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SOCS4Q8WXH5 440 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PTCHD1Q96NR3 888 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ELP3Q9H9T3 547 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 FKBP7Q9Y680 259 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ABCC10Q5T3U5 1492 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 C17orf113A0A1B0GUU1 675 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 A6NHS1 94 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 HACD1B0YJ81 288 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF207O43670 478 aaKnown RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ENDOD1O94919 500 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PRPH2P23942 346 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 RPS12P25398 132 aaKnown RBP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PRCPP42785 496 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 USP4Q13107 963 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SF3B4Q15427 424 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCN1A-212ENST00000636194 RAB30Q15771 203 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 C11orf91Q3C1V1 193 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 HFE2Q6ZVN8 426 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF367Q7RTV3 350 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 C6orf120Q7Z4R8 191 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 DNAAF5Q86Y56 855 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 PIGXQ8TBF5 258 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 SLC22A8Q8TCC7 542 aa5.98□□□□□ -1.45
SCN1A-212ENST00000636194 CD300LFQ8TDQ1 290 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms