RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 DEFB118Q96PH6 123 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CD320Q9NPF0 282 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SEMA4BQ9NPR2 832 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ATAD3AQ9NVI7 634 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ZDHHC3Q9NYG2 299 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 AURKCQ9UQB9 309 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 INSL6Q9Y581 213 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ABL2P42684 1182 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 IRF9Q00978 393 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 RTP2Q5QGT7 225 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SLC39A11Q8N1S5 342 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PLD6Q8N2A8 252 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 OR52K2Q8NGK3 314 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 RDH12Q96NR8 316 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PLEKHG4BQ96PX9 1271 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 C1QTNF1Q9BXJ1 281 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 KLF16Q9BXK1 252 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 RDH14Q9HBH5 336 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PNPLA3Q9NST1 481 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ZNF358Q9NW07 568 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 FNDC3AQ9Y2H6 1198 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SNX10Q9Y5X0 201 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ST14Q9Y5Y6 855 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 UBXN8O00124 270 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PRAMEF1O95521 474 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ALBP02768 609 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SERPINB1P30740 379 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SLC7A9P82251 487 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 EMX2Q04743 252 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CARD16Q5EG05 197 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 C6orf10Q5SRN2 563 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 C1orf53Q5VUE5 145 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 AHI1Q8N157 1196 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SNX31Q8N9S9 440 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SETD9Q8NE22 299 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SNX19Q92543 992 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 LPGAT1Q92604 370 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CLP1Q92989 425 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 LZTS1Q9Y250 596 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 MYRFQ9Y2G1 1151 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 FAM155AB1AL88 458 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 COCHO43405 550 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ERN1O75460 977 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 HNF4AP41235 474 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ASMTP46597 345 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 NUMBP49757 651 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 LAPTM5Q13571 262 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ANKRD33Q7Z3H0 272 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 NECAB2Q7Z6G3 386 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 HPS6Q86YV9 775 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 LZICQ8WZA0 190 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SLC45A3Q96JT2 553 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 RNF145Q96MT1 663 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 MRPS26Q9BYN8 205 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 IGSF5Q9NSI5 407 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CFAP97Q9P2B7 532 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TRPS1Q9UHF7 1281 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SUFUQ9UMX1 484 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 A0A1W2PP18 115 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 LDB2O43679 373 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SGTAO43765 313 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 TSPAN3O60637 253 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ADH1CP00326 375 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CASP2P42575 452 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ABCG1P45844 678 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 NUP107P57740 925 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 BTKQ06187 659 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PLEKHS1Q5SXH7 462 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 FAM46CQ5VWP2 391 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 NEK10Q6ZWH5 1172 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 HTR3DQ70Z44 454 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ISCA2Q86U28 154 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 EID3Q8N140 333 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PPP1R13LQ8WUF5 828 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SH3GL3Q99963 347 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 C1QTNF3Q9BXJ4 246 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ING2Q9H160 280 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CXCL16Q9H2A7 254 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ARL15Q9NXU5 204 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 FKBPLQ9UIM3 349 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 DYRK1BQ9Y463 629 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 A0A088AWK7 358 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 K7EPI3 171 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 HSD17B2P37059 387 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CDKL1Q00532 357 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SMAD1Q15797 465 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 LDLRAP1Q5SW96 308 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RFWD3Q6PCD5 774 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 IL27RAQ6UWB1 636 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ARHGAP36Q6ZRI8 547 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PLPP6Q8IY26 295 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RMND5BQ96G75 393 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 OR52B2Q96RD2 323 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SHCBP1LQ9BZQ2 653 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 MAN1C1Q9NR34 630 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 LMCD1Q9NZU5 365 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ACTR3BQ9P1U1 418 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ZDHHC2Q9UIJ5 367 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 OAS3Q9Y6K5 1087 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CAPN8A6NHC0 703 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms