RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 KCNN1Q92952 543 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 TSGA13Q96PP4 275 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 MTERF1Q99551 399 aaKnown RBP7.45□□□□□ -1.22
PKP4-217ENST00000628904 CCDC106Q9BWC9 280 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 ALG2Q9H553 416 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 IPPKQ9H8X2 491 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 LMCD1Q9NZU5 365 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 NDUFAF1Q9Y375 327 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 GLYATL1P3A0A0U1RQE8 302 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 LATO43561 262 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 SNNO75324 88 aaPredicted RBP7.45□□□□□ -1.22
PKP4-217ENST00000628904 LMNAP02545 664 aaKnown RBP7.45□□□□□ -1.22
PKP4-217ENST00000628904 FGBP02675 491 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 HOXD9P28356 352 aaPredicted RBP7.45□□□□□ -1.22
PKP4-217ENST00000628904 CCNHP51946 323 aaPredicted RBP7.45□□□□□ -1.22
PKP4-217ENST00000628904 MTPNP58546 118 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 KRT33BQ14525 404 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 CYP51A1Q16850 503 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 PABPC1LQ4VXU2 614 aaKnown RBP7.45□□□□□ -1.22
PKP4-217ENST00000628904 ATP6AP1LQ52LC2 224 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 WASHC2DQ5SRD0 308 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 LRRC66Q68CR7 880 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 ZNF549Q6P9A3 640 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 AFTPHQ6ULP2 937 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 TMEM199Q8N511 208 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 NMD3Q96D46 503 aaKnown RBP7.45□□□□□ -1.22
PKP4-217ENST00000628904 MAGED4Q96JG8 741 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 RNF145Q96MT1 663 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 ECSITQ9BQ95 431 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 FAM124BQ9H5Z6 455 aaPredicted RBP7.45□□□□□ -1.22
PKP4-217ENST00000628904 PKD2L2Q9NZM6 624 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 SLC25A13Q9UJS0 675 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 CROTQ9UKG9 612 aa7.45□□□□□ -1.22
PKP4-217ENST00000628904 LOXHD1Q8IVV2 1947 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 MYOFQ9NZM1 2061 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 MYO1GB0I1T2 1018 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 SLC7A4O43246 635 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 GRID2O43424 1007 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 ESRRBO95718 433 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 ZNF37AP17032 561 aaPredicted RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 MAP4P27816 1152 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 HNF1BP35680 557 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 PREPP48147 710 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 STX5Q13190 355 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 GPNMBQ14956 572 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 INSCQ1MX18 579 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.44□□□□□ -1.22
PKP4-217ENST00000628904 FNDC3BQ53EP0 1204 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 EPGNQ6UW88 154 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 NRG4Q8WWG1 115 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 LPGAT1Q92604 370 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 AURKBQ96GD4 344 aaPredicted RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 TSPAN18Q96SJ8 248 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 PRPF18Q99633 342 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 ZNF184Q99676 751 aaPredicted RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 SLC46A2Q9BY10 475 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 CCDC90BQ9GZT6 254 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 SOX17Q9H6I2 414 aaPredicted RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 ATP13A3Q9H7F0 1226 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 ANKRD6Q9Y2G4 727 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 ASB1Q9Y576 335 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 RBBP6Q7Z6E9 1792 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 CABIN1Q9Y6J0 2220 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 A0A0G2JN53 185 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 LEFTY2O00292 366 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 SNRPB2P08579 225 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 ZNF23P17027 643 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 POLR2EP19388 210 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 RPL10P27635 214 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 HTR6P50406 440 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 STC1P52823 247 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 SEC13P55735 322 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 CYP4F2P78329 520 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 ZXDBP98169 803 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 RARS2Q5T160 578 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 SERPINA13PQ6UXR4 307 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 GCNT7Q6ZNI0 430 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 CHST9Q7L1S5 443 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 TRIML2Q8N7C3 387 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 PSKH2Q96QS6 385 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 VN1R3Q9BXE9 311 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 ELOVL6Q9H5J4 265 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 CAPN10Q9HC96 672 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 DYRK4Q9NR20 520 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 FARSBQ9NSD9 589 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 ZNF711Q9Y462 761 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 LCTP09848 1927 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 A0A088AWK7 358 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 MMP2P08253 660 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 ATXN1LP0C7T5 689 aaKnown RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 TYRP14679 529 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 EN2P19622 333 aaPredicted RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 MAGEA6P43360 314 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 TTPAP49638 278 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 UFM1P61960 85 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 MS4A2Q01362 244 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 LRRC74AQ0VAA2 488 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 GTF2H3Q13889 308 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 PTGR1Q14914 329 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 UAP1L1Q3KQV9 507 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms