RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 CD82P27701 267 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 CSF2RBP32927 897 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 CTNNA1P35221 906 aaKnown RBP16.25■□□□□ 0.19
LINC00628-201ENST00000628516 HHEXQ03014 270 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 SRSF6Q13247 344 aaKnown RBP16.25■□□□□ 0.19
LINC00628-201ENST00000628516 SQSTM1Q13501 440 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 TRA2AQ13595 282 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00628-201ENST00000628516 SLC14A2Q15849 920 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 MANEAQ5SRI9 462 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 ZNF648Q5T619 568 aaPredicted RBP16.25■□□□□ 0.19
LINC00628-201ENST00000628516 TMEM71Q6P5X7 295 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 ZNF662Q6ZS27 426 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 PEX26Q7Z412 305 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 TMC3Q7Z5M5 1100 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 KATNAL2Q8IYT4 538 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 OR10G6Q8NH81 332 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 TFB1MQ8WVM0 346 aaKnown RBP16.25■□□□□ 0.19
LINC00628-201ENST00000628516 TADA1Q96BN2 335 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 TEKT5Q96M29 485 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 ZSCAN5AQ9BUG6 496 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 OR2AG1Q9H205 316 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 STN1Q9H668 368 aaKnown RBP16.25■□□□□ 0.19
LINC00628-201ENST00000628516 RAD18Q9NS91 495 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 UBP1Q9NZI7 540 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 TMEM9Q9P0T7 183 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 ATXN10Q9UBB4 475 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 AMFRQ9UKV5 643 aa16.25■□□□□ 0.19
LINC00628-201ENST00000628516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00628-201ENST00000628516 ZFC3H1O60293 1989 aaKnown RBP16.24■□□□□ 0.19
LINC00628-201ENST00000628516 DUX1O43812 170 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 NDST3O95803 873 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 PECAM1P16284 738 aaPredicted RBP16.24■□□□□ 0.19
LINC00628-201ENST00000628516 CTNNA2P26232 953 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 CSTF2P33240 577 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC00628-201ENST00000628516 DCDC1P59894 354 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 NFATC2Q13469 925 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 LY6DQ14210 128 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 PRKD1Q15139 912 aaPredicted RBP16.24■□□□□ 0.19
LINC00628-201ENST00000628516 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.24■□□□□ 0.19
LINC00628-201ENST00000628516 IYDQ6PHW0 289 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 SPOCD1Q6ZMY3 1216 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 SLC9B2Q86UD5 537 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 PHYKPLQ8IUZ5 450 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 TRAM1L1Q8N609 369 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 AGBL5Q8NDL9 886 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 TAAR9Q96RI9 348 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 HERPUD2Q9BSE4 406 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 B3GNT4Q9C0J1 378 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 TRIM39Q9HCM9 518 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 SARS2Q9NP81 518 aaKnown RBP16.24■□□□□ 0.19
LINC00628-201ENST00000628516 PACSIN2Q9UNF0 486 aaPredicted RBP16.24■□□□□ 0.19
LINC00628-201ENST00000628516 PCDHA3Q9Y5H8 950 aa16.24■□□□□ 0.19
LINC00628-201ENST00000628516 ZRANB2O95218 330 aaKnown RBP eCLIP16.23■□□□□ 0.19
LINC00628-201ENST00000628516 FGF3P11487 239 aaPredicted RBP16.23■□□□□ 0.19
LINC00628-201ENST00000628516 F3P13726 295 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 SLC2A4P14672 509 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 TAZQ16635 292 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 SNAP47Q5SQN1 464 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 PDPK2PQ6A1A2 396 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 VASH2Q86V25 355 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 ZC3H18Q86VM9 953 aaKnown RBP16.23■□□□□ 0.19
LINC00628-201ENST00000628516 CCDC50Q8IVM0 306 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 RCOR2Q8IZ40 523 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 GLYATL1Q969I3 302 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 SH3KBP1Q96B97 665 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 SRPK1Q96SB4 655 aaKnown RBP16.23■□□□□ 0.19
LINC00628-201ENST00000628516 SEMA4CQ9C0C4 833 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 KLC4Q9NSK0 619 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 TRMT1Q9NXH9 659 aaKnown RBP16.23■□□□□ 0.19
LINC00628-201ENST00000628516 NFKBIL1Q9UBC1 381 aaPredicted RBP16.23■□□□□ 0.19
LINC00628-201ENST00000628516 FAM153AQ9UHL3 310 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 PYCARDQ9ULZ3 195 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 CFAP46Q8IYW2 2715 aa16.23■□□□□ 0.19
LINC00628-201ENST00000628516 CCDC66A2RUB6 948 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 A6NCN8 305 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 OR5K4A6NMS3 321 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 AURKAO14965 403 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 BPIP17213 487 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 NFKB1P19838 968 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 CD68P34810 354 aaPredicted RBP16.22■□□□□ 0.19
LINC00628-201ENST00000628516 TNNT3P45378 269 aaPredicted RBP16.22■□□□□ 0.19
LINC00628-201ENST00000628516 MAPK9P45984 424 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 RWDD2BP57060 319 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 ADCY2Q08462 1091 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 WASHC5Q12768 1159 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 TFDP3Q5H9I0 405 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 CRTC3Q6UUV7 619 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 ADGRG6Q86SQ4 1221 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 ZNF605Q86T29 641 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 FAM129CQ86XR2 697 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 DTX1Q86Y01 620 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 JPH3Q8WXH2 748 aaPredicted RBP16.22■□□□□ 0.19
LINC00628-201ENST00000628516 NCSTNQ92542 709 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 ALG3Q92685 438 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 P3H4Q92791 437 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 ART4Q93070 314 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 PMEPA1Q969W9 287 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 HAUS1Q96CS2 278 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 SGF29Q96ES7 293 aa16.22■□□□□ 0.19
LINC00628-201ENST00000628516 RBM41Q96IZ5 413 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms