RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 DNAAF3Q8N9W5 541 aa16.54■□□□□ 0.24
UBE3D-208ENST00000626828 KDF1Q8NAX2 398 aaPredicted RBP16.54■□□□□ 0.24
UBE3D-208ENST00000626828 CCDC74AQ96AQ1 378 aa16.54■□□□□ 0.24
UBE3D-208ENST00000626828 GRAMD1AQ96CP6 724 aa16.54■□□□□ 0.24
UBE3D-208ENST00000626828 ZCCHC2Q9C0B9 1178 aaKnown RBP16.54■□□□□ 0.24
UBE3D-208ENST00000626828 ASB8Q9H765 288 aa16.54■□□□□ 0.24
UBE3D-208ENST00000626828 URB1O60287 2271 aaKnown RBP16.54■□□□□ 0.24
UBE3D-208ENST00000626828 IGF2RP11717 2491 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 RHPN2P1A8MT19 583 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 GAPDHSO14556 408 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-208ENST00000626828 KCNJ13O60928 360 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 MTX2O75431 263 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 SRP72O76094 671 aaKnown RBP16.53■□□□□ 0.24
UBE3D-208ENST00000626828 ACP5P13686 325 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 SEMA5AQ13591 1074 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 SKIDA1Q1XH10 827 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 PPP1R21Q6ZMI0 780 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 PRUNE1Q86TP1 453 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 SFTPA2Q8IWL1 248 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 NAGSQ8N159 534 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 OR52K1Q8NGK4 314 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 OR13C4Q8NGS5 318 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 STYXQ8WUJ0 223 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 OSBPL9Q96SU4 736 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 NRSN2Q9GZP1 204 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 SMOXQ9NWM0 555 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 FKBPLQ9UIM3 349 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 PCYT1BQ9Y5K3 369 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-208ENST00000626828 DNMT3AQ9Y6K1 912 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-208ENST00000626828 RNF215Q9Y6U7 377 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 EPG5Q9HCE0 2579 aa16.53■□□□□ 0.24
UBE3D-208ENST00000626828 OR5K4A6NMS3 321 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 NTN3O00634 580 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 CES2O00748 559 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 PRAMEF1O95521 474 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 ZSCAN5DPP0CG00 497 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 SLC2A4P14672 509 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 ZNF7P17097 686 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 ZNF140P52738 457 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 CCL7P80098 99 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 TMPRSS15P98073 1019 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 XIAPP98170 497 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 SPIDRQ14159 915 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 POU6F1Q14863 301 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 KHDC1Q4VXA5 237 aaKnown RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 GPRC6AQ5T6X5 926 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 IYDQ6PHW0 289 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 RBM44Q6ZP01 1051 aaKnown RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 Q8N9G6 341 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 GLIS1Q8NBF1 620 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 DDHD1Q8NEL9 900 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 ACTRT1Q8TDG2 376 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 MS4A14Q96JA4 679 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 ZNF514Q96K75 400 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 GFM1Q96RP9 751 aaKnown RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 LRRN3Q9H3W5 708 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 CCDC86Q9H6F5 360 aaKnown RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 KLC4Q9NSK0 619 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 NLE1Q9NVX2 485 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-208ENST00000626828 RABGEF1Q9UJ41 708 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 KCNK6Q9Y257 313 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 SLC30A1Q9Y6M5 507 aa16.52■□□□□ 0.24
UBE3D-208ENST00000626828 TRBV23OR9-2A0A075B6M9 112 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 AGAP14A8MT82 685 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 TMX2-CTNND1H3BSU7 103 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 H7C0S8 307 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 AP3B1O00203 1094 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 PGRMC1O00264 195 aaKnown RBP16.51■□□□□ 0.23
UBE3D-208ENST00000626828 CSO75390 466 aaKnown RBP16.51■□□□□ 0.23
UBE3D-208ENST00000626828 APRTP07741 180 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 VCLP18206 1134 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 MSH3P20585 1137 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 GPR3P46089 330 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 MAZP56270 477 aaKnown RBP16.51■□□□□ 0.23
UBE3D-208ENST00000626828 CCDC173Q0VFZ6 552 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 NFATC2Q13469 925 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 RTP5Q14D33 572 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 INSCQ1MX18 579 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 ISXQ2M1V0 245 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 GPR33Q49SQ1 333 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 TMEM220Q6QAJ8 160 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 CRTC3Q6UUV7 619 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 SNX20Q7Z614 316 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 CCNJLQ8IV13 435 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 HEXDCQ8WVB3 486 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 PATE1Q8WXA2 126 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 ULK4Q96C45 1275 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 CDKN2AIPNLQ96HQ2 116 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 TIMM29Q9BSF4 260 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 CASS4Q9NQ75 786 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 DKK4Q9UBT3 224 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 TBC1D29Q9UFV1 150 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 SLC23A2Q9UGH3 650 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 SNX12Q9UMY4 172 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 SPEGQ15772 3267 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 APC2O95996 2303 aa16.51■□□□□ 0.23
UBE3D-208ENST00000626828 KIR2DS5A0A0G2JLQ3 304 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 A0A0G2JNG1 304 aa16.5■□□□□ 0.23
UBE3D-208ENST00000626828 MROH6A6NGR9 719 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms