RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 STX7O15400 261 aaKnown RBP22.08■■□□□ 1.13
SF1-220ENST00000626028 RRP8O43159 456 aaKnown RBP22.08■■□□□ 1.13
SF1-220ENST00000626028 KCNJ13O60928 360 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 CPNE6O95741 557 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 MPOP05164 745 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 EIF2S3P41091 472 aaKnown RBP22.08■■□□□ 1.13
SF1-220ENST00000626028 INHBCP55103 352 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 KIR2DS5Q14953 304 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 ATP13A5Q4VNC0 1218 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 LDLRAP1Q5SW96 308 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 LRRTM4Q86VH4 590 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 SFTPA2Q8IWL1 248 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 FAM71DQ8N9W8 422 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 SH3KBP1Q96B97 665 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 STN1Q9H668 368 aaKnown RBP22.08■■□□□ 1.13
SF1-220ENST00000626028 SYNDIG1Q9H7V2 258 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 BPIFA1Q9NP55 256 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 THSD1Q9NS62 852 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 SATB2Q9UPW6 733 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 PLEKHM1Q9Y4G2 1056 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 PIKFYVEQ9Y2I7 2098 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 ERI2A8K979 691 aaKnown RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 CDK14O94921 469 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 ACP5P13686 325 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 F3P13726 295 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 GPLD1P80108 840 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 CCZ1BP86790 482 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 CCZ1P86791 482 aaPredicted RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 ZFP36L1Q07352 338 aaKnown RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 TMEM115Q12893 351 aaPredicted RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 KCTD11Q693B1 232 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 IYDQ6PHW0 289 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 PIM3Q86V86 326 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 SLC13A5Q86YT5 568 aaPredicted RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 Q8N9G6 341 aaPredicted RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 SLC46A1Q96NT5 459 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 TBL1YQ9BQ87 522 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 TMEM121Q9BTD3 319 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 LRRC40Q9H9A6 602 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 SARS2Q9NP81 518 aaKnown RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 ASCL3Q9NQ33 180 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 R3HDM2Q9Y2K5 976 aaKnown RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 ZKSCAN5Q9Y2L8 839 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 PCYT1BQ9Y5K3 369 aaPredicted RBP22.07■■□□□ 1.12
SF1-220ENST00000626028 ITPR1Q14643 2758 aa22.07■■□□□ 1.12
SF1-220ENST00000626028 A6NCN8 305 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 VCLP18206 1134 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 RBMS1P29558 406 aaKnown RBP22.06■■□□□ 1.12
SF1-220ENST00000626028 HADHAP40939 763 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 MSLNQ13421 630 aaPredicted RBP22.06■■□□□ 1.12
SF1-220ENST00000626028 GTF2H3Q13889 308 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 C3orf38Q5JPI3 329 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 DDHD1Q8NEL9 900 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 TTC25Q96NG3 672 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 LZTFL1Q9NQ48 299 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 TBC1D29Q9UFV1 150 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 TMPRSS11EQ9UL52 423 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 PRKAB1Q9Y478 270 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 DNMT3AQ9Y6K1 912 aaPredicted RBP22.06■■□□□ 1.12
SF1-220ENST00000626028 NBEAQ8NFP9 2946 aa22.06■■□□□ 1.12
SF1-220ENST00000626028 TCRBV7S2A1N4TA0A589 114 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 KLHL33A6NCF5 533 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 PPM1DO15297 605 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 B4GAT1O43505 415 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 LIASO43766 372 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 ITGA2BP08514 1039 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 ALDH4A1P30038 563 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 PCBP4P57723 403 aaKnown RBP22.05■■□□□ 1.12
SF1-220ENST00000626028 OASLQ15646 514 aaKnown RBP22.05■■□□□ 1.12
SF1-220ENST00000626028 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.05■■□□□ 1.12
SF1-220ENST00000626028 DENND5AQ6IQ26 1287 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 LRRC69Q6ZNQ3 347 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 LINC00523Q86TU6 105 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 SLC9B2Q86UD5 537 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 ZNF248Q8NDW4 579 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 SLC37A2Q8TED4 501 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 PATE1Q8WXA2 126 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 ZNF514Q96K75 400 aaPredicted RBP22.05■■□□□ 1.12
SF1-220ENST00000626028 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.05■■□□□ 1.12
SF1-220ENST00000626028 EPB41L1Q9H4G0 881 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 KCNK6Q9Y257 313 aa22.05■■□□□ 1.12
SF1-220ENST00000626028 PRR19A6NJB7 356 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 PLD2O14939 933 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 TLX3O43711 291 aaPredicted RBP22.04■■□□□ 1.12
SF1-220ENST00000626028 AP2A1O95782 977 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 ZNF7P17097 686 aaPredicted RBP22.04■■□□□ 1.12
SF1-220ENST00000626028 EPHA4P54764 986 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 TRA2AQ13595 282 aaKnown RBP eCLIP22.04■■□□□ 1.124e-10■□□□□ 9.6
SF1-220ENST00000626028 CHRNA6Q15825 494 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 INSCQ1MX18 579 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 MAP9Q49MG5 647 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 FAM151BQ6UXP7 276 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 WASH2PQ6VEQ5 465 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 RAB11FIP2Q7L804 512 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 B3GNT8Q7Z7M8 397 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 CLEC14AQ86T13 490 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 SLITRK4Q8IW52 837 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 GDAP1Q8TB36 358 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 MAIP1Q8WWC4 291 aa22.04■■□□□ 1.12
SF1-220ENST00000626028 CCDC97Q96F63 343 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms