RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TAS2R40P59535 323 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 MRPS34P82930 218 aaKnown RBP3.2□□□□□ -1.9
VBP1-204ENST00000625964 PLIN5Q00G26 463 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 ADIPOQQ15848 244 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 SIRPB2Q5JXA9 342 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 LRIF1Q5T3J3 769 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 HAUS3Q68CZ6 603 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 FAAH2Q6GMR7 532 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 FAM171BQ6P995 826 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 NCEH1Q6PIU2 408 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 PAPD4Q6PIY7 484 aaKnown RBP3.2□□□□□ -1.9
VBP1-204ENST00000625964 C19orf48Q6RUI8 117 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 ZNF704Q6ZNC4 412 aaPredicted RBP3.2□□□□□ -1.9
VBP1-204ENST00000625964 PXKQ7Z7A4 578 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 SLC24A4Q8NFF2 622 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 OR52I2Q8NH67 350 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 THAP6Q8TBB0 222 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 UTP15Q8TED0 518 aaKnown RBP3.2□□□□□ -1.9
VBP1-204ENST00000625964 ARHGEF2Q92974 986 aaKnown RBP3.2□□□□□ -1.9
VBP1-204ENST00000625964 C1orf74Q96LT6 269 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 NEURL2Q9BR09 285 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 PDZD7Q9H5P4 517 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 KRT84Q9NSB2 600 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 FBXW11Q9UKB1 542 aa3.2□□□□□ -1.9
VBP1-204ENST00000625964 KANSL1LA0AUZ9 987 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 LIPT2A6NK58 231 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 EIF3DO15371 548 aaKnown RBP eCLIP3.19□□□□□ -1.9
VBP1-204ENST00000625964 RNASEH2AO75792 299 aaKnown RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 LDLRP01130 860 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 ICAM1P05362 532 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 HOXC13P31276 330 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 PPARGP37231 505 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 TFAP4Q01664 338 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 LRMPQ12912 555 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 ZSCAN23Q3MJ62 389 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 KRTCAP3Q53RY4 240 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 ZNF852Q6ZMS4 543 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 NFE4Q86UQ8 179 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 RNF168Q8IYW5 571 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 OR8K5Q8NH50 307 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 HM13Q8TCT9 377 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 LINGO1Q96FE5 620 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 MPP4Q96JB8 637 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 SEPT5Q99719 369 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 TRMT61BQ9BVS5 477 aaKnown RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 LRMDAQ9H2I8 198 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 SH2D4AQ9H788 454 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 ZNF334Q9HCZ1 680 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 MARCH4Q9P2E8 410 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 UBA2Q9UBT2 640 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 CORO1CQ9ULV4 474 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 OR5K3A6NET4 321 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 TMEM178BH3BS89 294 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 UGT1A1P22309 533 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 NR2F2P24468 414 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 ARL3P36405 182 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 HOXA1P49639 335 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 DMP1Q13316 513 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 GKAP1Q5VSY0 366 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 NSUN5P2Q63ZY6 315 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 GLDNQ6ZMI3 551 aaPredicted RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 CCDC190Q86UF4 302 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 ADSSL1Q8N142 457 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 ALG14Q96F25 216 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 ELMOD3Q96FG2 381 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 EGLN2Q96KS0 407 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 NAP1L4Q99733 375 aaKnown RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 SEMA3CQ99985 751 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 MUC13Q9H3R2 512 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 MAGIXQ9H6Y5 334 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 UPF2Q9HAU5 1272 aaKnown RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 MAP3K20Q9NYL2 800 aaKnown RBP3.19□□□□□ -1.9
VBP1-204ENST00000625964 POLG2Q9UHN1 485 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 MTMR6Q9Y217 621 aa3.19□□□□□ -1.9
VBP1-204ENST00000625964 TDRD9Q8NDG6 1382 aaKnown RBP3.18□□□□□ -1.9
VBP1-204ENST00000625964 ZCWPW2A0A1B0GU75 182 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 MAP2K7O14733 419 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 DAB1O75553 588 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 DDX58O95786 925 aaKnown RBP3.18□□□□□ -1.9
VBP1-204ENST00000625964 LAMP2P13473 410 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 RARGP13631 454 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 TNFAIP3P21580 790 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 PAX3P23760 479 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 KRT2P35908 639 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 SETQ01105 290 aaPredicted RBP3.18□□□□□ -1.9
VBP1-204ENST00000625964 RUNX1T1Q06455 604 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 SREBF2Q12772 1141 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 DDX10Q13206 875 aaKnown RBP3.18□□□□□ -1.9
VBP1-204ENST00000625964 SOWAHCQ53LP3 525 aaPredicted RBP3.18□□□□□ -1.9
VBP1-204ENST00000625964 ACSM2BQ68CK6 577 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 PMS2CLQ68D20 193 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 LCN10Q6JVE6 187 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 PLEKHM3Q6ZWE6 761 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 IKBIPQ70UQ0 350 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 MARK2Q7KZI7 788 aaKnown RBP3.18□□□□□ -1.9
VBP1-204ENST00000625964 RSRC2Q7L4I2 434 aaKnown RBP3.18□□□□□ -1.9
VBP1-204ENST00000625964 MAATS1Q7Z4T9 603 aa3.18□□□□□ -1.9
VBP1-204ENST00000625964 CERS3Q8IU89 383 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms