RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 GOLM1Q8NBJ4 401 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SIDT2Q8NBJ9 832 aaKnown RBP11.17□□□□□ -0.62
VARS2-213ENST00000625423 CYP2S1Q96SQ9 504 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SEPT5Q99719 369 aaPredicted RBP11.17□□□□□ -0.62
VARS2-213ENST00000625423 CRISPLD1Q9H336 500 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 GPBP1L1Q9HC44 474 aaPredicted RBP11.17□□□□□ -0.62
VARS2-213ENST00000625423 PCTPQ9UKL6 214 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 ASB1Q9Y576 335 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 V9GYQ6 96 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 A0A087WXM4 84 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 TCRBV5S2A0A599 114 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 F5H5T6 163 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SNX2O60749 519 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SLC22A3O75751 556 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 ESRRBO95718 433 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 GPIP06744 558 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 MAGEA11P43364 429 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 TIGD2Q4W5G0 525 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 RGMBQ6NW40 437 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 GPR141Q7Z602 305 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SPRED1Q7Z699 444 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 CLVS1Q8IUQ0 354 aaPredicted RBP11.17□□□□□ -0.62
VARS2-213ENST00000625423 PIANPQ8IYJ0 282 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 BIRC8Q96P09 236 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 MGME1Q9BQP7 344 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 CINPQ9BW66 212 aaPredicted RBP11.17□□□□□ -0.62
VARS2-213ENST00000625423 INTS7Q9NVH2 962 aaKnown RBP11.17□□□□□ -0.62
VARS2-213ENST00000625423 EBF1Q9UH73 591 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 TANC1Q9C0D5 1861 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 INPPL1O15357 1258 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 ADAMTS4O75173 837 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 NIPSNAP2O75323 286 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 RASAL1O95294 804 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 CHEK2O96017 543 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 C1RP00736 705 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 UROSP10746 265 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 IL12AP29459 219 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 SLC6A4P31645 630 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 HK3P52790 923 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 XKR7Q5GH72 579 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 HABP4Q5JVS0 413 aaKnown RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 TMTC4Q5T4D3 741 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 PSAPL1Q6NUJ1 521 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 OFCC1Q8IZS5 231 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 SEPHS2Q99611 448 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 A0A0U1RQS6 177 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 CLOCKO15516 846 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 TLR5O60602 858 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 EEDO75530 441 aaKnown RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 OR4F21O95013 312 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 RFC2P35250 354 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 POLR2JP52435 117 aaKnown RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 EMP3P54852 163 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 GNA12Q03113 381 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 DCTN2Q13561 401 aaKnown RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 FAM171A1Q5VUB5 890 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 ALG1LQ6GMV1 187 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 BBS5Q8N3I7 341 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 TMEM199Q8N511 208 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 NKAPQ8N5F7 415 aaKnown RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 MAGEE2Q8TD90 523 aaPredicted RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 TSPEARQ8WU66 669 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 EEF1AKMT1Q8WVE0 214 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 CDK15Q96Q40 435 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 ZIC5Q96T25 663 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 SOX17Q9H6I2 414 aaPredicted RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 BPIFA1Q9NP55 256 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 SEPT3Q9UH03 358 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 EIF2B4Q9UI10 523 aaKnown RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 LEF1Q9UJU2 399 aaPredicted RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 ANAPC2Q9UJX6 822 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 STX16O14662 325 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 MLYCDO95822 493 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 TSPAN12O95859 305 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 PRLP01236 227 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 PYGLP06737 847 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 ESRRGP62508 458 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 RING1Q06587 406 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 PTPRRQ15256 657 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 TAF1AQ15573 450 aaPredicted RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 MFSD14CQ5VZR4 134 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 NANOGP8Q6NSW7 305 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 PTRH1Q86Y79 214 aaKnown RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 CDYL2Q8N8U2 506 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 FNDC5Q8NAU1 212 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 LPCAT1Q8NF37 534 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 TNIP2Q8NFZ5 429 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 GIPC2Q8TF65 315 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 SEPT8Q92599 483 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 FAM193BQ96PV7 902 aaPredicted RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 NUSAP1Q9BXS6 441 aaKnown RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 BRINP2Q9C0B6 783 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 NANOGQ9H9S0 305 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 GALNT8Q9NY28 637 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 TUBA8Q9NY65 449 aaPredicted RBP11.16□□□□□ -0.62
VARS2-213ENST00000625423 CD274Q9NZQ7 290 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 FKBPLQ9UIM3 349 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 PCDHGC4Q9Y5F7 938 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 FADS3Q9Y5Q0 445 aa11.16□□□□□ -0.62
VARS2-213ENST00000625423 ZFP37Q9Y6Q3 630 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms