RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 NSUN2Q08J23 767 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNX1-214ENST00000625244 IRGCQ6NXR0 463 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 PARP9Q8IXQ6 854 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 AVL9Q8NBF6 648 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 SLC41A2Q96JW4 573 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 FAM81BQ96LP2 452 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 PDCL3Q9H2J4 239 aa13.66□□□□□ -0.22
SNX1-214ENST00000625244 FOXN3O00409 490 aaPredicted RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 CREB3O43889 395 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 SCRG1O75711 98 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 CPP00450 1065 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 ALPPP05187 535 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 CYP2A6P11509 494 aaPredicted RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 XRCC1P18887 633 aaPredicted RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 CAPN3P20807 821 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 SDC4P31431 198 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 PAPOLAP51003 745 aaKnown RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 AP1S1P61966 158 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 MYBPC3Q14896 1274 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 VWA2Q5GFL6 755 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 TTI2Q6NXR4 508 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 BPHLQ86WA6 291 aaPredicted RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 ZADH2Q8N4Q0 377 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 FAM172AQ8WUF8 416 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 FAR1Q8WVX9 515 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 CENPIQ92674 756 aaPredicted RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 RELTQ969Z4 430 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 NTAN1Q96AB6 310 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 ZDHHC12Q96GR4 267 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 ZNF514Q96K75 400 aaPredicted RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 NLNQ9BYT8 704 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 SLC39A8Q9C0K1 460 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 FGF21Q9NSA1 209 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 SEMA5BQ9P283 1151 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 ZNF624Q9P2J8 865 aaPredicted RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 CNOT6Q9ULM6 557 aaKnown RBP13.65□□□□□ -0.22
SNX1-214ENST00000625244 FER1L5A0AVI2 2057 aa13.65□□□□□ -0.22
SNX1-214ENST00000625244 C2CD4BA6NLJ0 364 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 PSMA7O14818 248 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 VIPP01282 170 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 CAPN1P07384 714 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 CD1EP15812 388 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 ACY1Q03154 408 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 PLEKHS1Q5SXH7 462 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 PRAMEF17Q5VTA0 474 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 DUS1LQ6P1R4 473 aaKnown RBP13.64□□□□□ -0.23
SNX1-214ENST00000625244 ARHGAP36Q6ZRI8 547 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 STRADAQ7RTN6 431 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 SLFN11Q7Z7L1 901 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 MRGPRGQ86SM5 289 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 TMEM126BQ8IUX1 230 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 GALNT16Q8N428 558 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 EXD1Q8NHP7 514 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 JOSD2Q8TAC2 188 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 CPA5Q8WXQ8 436 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 NANOS1Q8WY41 292 aaKnown RBP13.64□□□□□ -0.23
SNX1-214ENST00000625244 SMARCE1Q969G3 411 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 SCRN2Q96FV2 425 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 DHTKD1Q96HY7 919 aaPredicted RBP13.64□□□□□ -0.23
SNX1-214ENST00000625244 TRAPPC9Q96Q05 1148 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 GSDMAQ96QA5 445 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 SMIM14Q96QK8 99 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 CATSPERBQ9H7T0 1116 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 VPS18Q9P253 973 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 EPHA6Q9UF33 1036 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 NOVA2Q9UNW9 492 aaKnown RBP13.64□□□□□ -0.23
SNX1-214ENST00000625244 SIK3Q9Y2K2 1263 aa13.64□□□□□ -0.23
SNX1-214ENST00000625244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.63□□□□□ -0.23
SNX1-214ENST00000625244 MASP2O00187 686 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 MEN1O00255 615 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 KLK3P07288 261 aaPredicted RBP13.63□□□□□ -0.23
SNX1-214ENST00000625244 CTPS1P17812 591 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 SMTNL2Q2TAL5 461 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 TAF3Q5VWG9 929 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 FAM198BQ6UWH4 519 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 SPOCD1Q6ZMY3 1216 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 NLRP8Q86W28 1048 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 PHYKPLQ8IUZ5 450 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 TRIM48Q8IWZ4 208 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 ELOA2Q8IYF1 753 aaPredicted RBP13.63□□□□□ -0.23
SNX1-214ENST00000625244 DSELQ8IZU8 1212 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 TM9SF4Q92544 642 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 UBXN4Q92575 508 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 HDAC11Q96DB2 347 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 MCCC1Q96RQ3 725 aaPredicted RBP13.63□□□□□ -0.23
SNX1-214ENST00000625244 RIOK2Q9BVS4 552 aaKnown RBP13.63□□□□□ -0.23
SNX1-214ENST00000625244 TMUB1Q9BVT8 246 aa13.63□□□□□ -0.23
SNX1-214ENST00000625244 SEC16AO15027 2179 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 A0A1W2PQ67 120 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 KCNN4O15554 427 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 SOCS5O75159 536 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 MBD3O95983 291 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 JCHAINP01591 159 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 SPTBP11277 2137 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 CYP11B1P15538 503 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 PTMSP20962 102 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 OTX2P32243 289 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 PTPN9P43378 593 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 STX17P56962 302 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms