RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 THOP1P52888 689 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 FPGSQ05932 587 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 AGKQ53H12 422 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 PITRM1Q5JRX3 1037 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 SNX20Q7Z614 316 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 KBTBD6Q86V97 674 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 SERPINA9Q86WD7 417 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 GPSM1Q86YR5 675 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 ZNF483Q8TF39 744 aaPredicted RBP19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 PDLIM5Q96HC4 596 aaKnown RBP19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 AKTIPQ9H8T0 292 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 SARS2Q9NP81 518 aaKnown RBP19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 APPL1Q9UKG1 709 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 INSL6Q9Y581 213 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 PIP5K1BO14986 540 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 CLDN7O95471 211 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 SRCP12931 536 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 RPS3P23396 243 aaKnown RBP eCLIP19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 DPP6P42658 865 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 ACADVLP49748 655 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 HK3P52790 923 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 ERVFC1P60507 584 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 NFATC2Q13469 925 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 PAF1Q8N7H5 531 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 RPL10LQ96L21 214 aaKnown RBP19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 FBRSL1Q9HCM7 1045 aaKnown RBP19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 IL26Q9NPH9 171 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 HCFC1R1Q9NWW0 138 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 CCDC167Q9P0B6 97 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 PCTPQ9UKL6 214 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 CCL26Q9Y258 94 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 MTCL1Q9Y4B5 1905 aaKnown RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 DOCK6Q96HP0 2047 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 NCF1BA6NI72 391 aaPredicted RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 NCF1CA8MVU1 366 aaPredicted RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 CFLARO15519 480 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 ALDOCP09972 364 aaKnown RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 NCF1P14598 390 aaPredicted RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 HLA-FP30511 346 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 CTSOP43234 321 aaPredicted RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 SNRPD1P62314 119 aaKnown RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 TRIM68Q6AZZ1 485 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 ZSWIM9Q86XI8 627 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 VOPP1Q96AW1 172 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 ISG20Q96AZ6 181 aaKnown RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 KCNA7Q96RP8 456 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 LYSMD1Q96S90 227 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 CLPBQ9H078 707 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 TUBB1Q9H4B7 451 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 ASB8Q9H765 288 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 SEMA4BQ9NPR2 832 aaPredicted RBP19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 PACSIN3Q9UKS6 424 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 HS3ST2Q9Y278 367 aa19.52■□□□□ 0.72
PCDHB11-202ENST00000624887 TRBV5-4A0A0C4DH59 114 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 A0A1B0GTL3 188 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 SNX2O60749 519 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 MLYCDO95822 493 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 SNRPB2P08579 225 aaKnown RBP19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 BPIP17213 487 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 ITGALP20701 1170 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 STK19P49842 368 aaPredicted RBP19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 AGTR2P50052 363 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 EPHA5P54756 1037 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 CEACAM7Q14002 265 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 FBXO48Q5FWF7 155 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 LYPLAL1Q5VWZ2 237 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 DHDDSQ86SQ9 333 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 PHYKPLQ8IUZ5 450 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 RBFAQ8N0V3 343 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 CBARPQ8N350 705 aaPredicted RBP19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 HIPK4Q8NE63 616 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 SLC25A23Q9BV35 468 aa19.52■□□□□ 0.71
PCDHB11-202ENST00000624887 HIDE1A8MVS5 230 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 FBP2O00757 339 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 DDX6P26196 483 aaKnown RBP eCLIP19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 CA5AP35218 305 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 CLNS1AP54105 237 aaKnown RBP19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 STX1BP61266 288 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 LRP8Q14114 963 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 TGFBIQ15582 683 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 REP15Q6BDI9 236 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 PTRHD1Q6GMV3 140 aaKnown RBP19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 RNF111Q6ZNA4 994 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 MRPL43Q8N983 215 aaKnown RBP19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 CCDC97Q96F63 343 aaPredicted RBP19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 TUBGCP5Q96RT8 1024 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 ZNF184Q99676 751 aaPredicted RBP19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 CACNA2D2Q9NY47 1150 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 CD274Q9NZQ7 290 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 GNPTGQ9UJJ9 305 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 SARDHQ9UL12 918 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 LZTS1Q9Y250 596 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 PTGDR2Q9Y5Y4 395 aa19.51■□□□□ 0.71
PCDHB11-202ENST00000624887 ESRRBO95718 433 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 XRCC1P18887 633 aaPredicted RBP19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 GPX3P22352 226 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 ME2P23368 584 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 ACRV1P26436 265 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 PKNOX1P55347 436 aa19.5■□□□□ 0.71
PCDHB11-202ENST00000624887 MYLK3Q32MK0 819 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms